def __init__(self, si, subLoc=defaultSubLoc):
super(simpleStageJob, self).__init__(si, subLoc)
self.job = JobObject(self.si)
self.job.setCommandline("echo \"hello world\"")
self.job.setApplication(Constants.GENERIC_APPLICATION_NAME)
self.job.setSubmissionLocation(self.subLoc)
def prepare(self):
job = JobObject(self.si)
job.setUniqueJobname("echo_job1")
job.setCommandline("echo \"Hello World\"")
job.createJob()
self.job = job
def prepare(self):
job = JobObject(self.si)
job.setUniqueJobname("echo_job1")
job.setCommandline("echo \"Hello World\"")
job.addInputFileUrl("/home/markus/tmp/text0.txt")
job.createJob()
self.job = job
def prepare(self):
job = JobObject(self.si)
job.setUniqueJobname("echo_job1")
job.setCommandline("echo \"Hello World\"")
job.addInputFileUrl("/home/markus/tmp/46mbInput0.bin")
job.setApplication(Constants.GENERIC_APPLICATION_NAME)
job.setSubmissionLocation(self.subLoc)
job.createJob()
self.job = job
def prepare(self):
job = JobObject(self.si)
job.setUniqueJobname("echo_job1")
job.setCommandline("echo \"Hello World\"")
job.addInputFileUrl(
"gsiftp://ng2.canterbury.ac.nz/home/gridcloud061/tmp/text0.txt")
job.addInputFileUrl(
"gsiftp://ng2.canterbury.ac.nz/home/gridcloud061/tmp/text1.txt")
job.addInputFileUrl(
"gsiftp://ng2.canterbury.ac.nz/home/gridcloud061/tmp/text2.txt")
job.addInputFileUrl(
"gsiftp://ng2.canterbury.ac.nz/home/gridcloud061/tmp/text3.txt")
job.addInputFileUrl(
"gsiftp://ng2.canterbury.ac.nz/home/gridcloud061/tmp/text4.txt")
job.setApplication(Constants.GENERIC_APPLICATION_NAME)
job.setSubmissionLocation(self.subLoc)
job.createJob()
self.job = job
files_to_upload.append(line)
else:
print 'Not a file: ' + line
sys.exit(1)
return files_to_upload
files_to_upload = read_files(files_file)
if not si:
LoginManager.initEnvironment()
si = LoginManager.login('bestgrid', True)
filemanager = GrisuRegistryManager.getDefault(si).getFileManager()
job = JobObject(si)
job.setSubmissionLocation('pan:pan.nesi.org.nz')
job.setTimestampJobname(jobname_template)
job.setCommandline(commandline)
# add input files
for file in files_to_upload:
job.addInputFileUrl(file)
jobname = job.createJob('/nz/nesi')
print 'Submitting job...'
job.submitJob()
print 'Jobname: ' + jobname
print 'Waiting for job to finish...'
job.waitForJobToFinish(jobstate_check_intervall)
si = LoginManager.loginCommandline('bestgrid')
uem = GrisuRegistryManager.getDefault(si).getUserEnvironmentManager()
fm = GrisuRegistryManager.getDefault(si).getFileManager()
allJobs = uem.getCurrentJobs(False)
myJobs = []
finishedJobs = []
# getting all the jobs for the run we are interested in
for job in allJobs:
name = job.jobname()
if name.startswith('staging_test'):
tempJob = JobObject(si, name)
myJobs.append(tempJob)
fileUrls = []
# we could just wait for all the jobs, but looping makes more sense
# since we can stage out finished jobs while some other jobs of the batch
# are still running
while len(myJobs) > 0:
for job in myJobs:
if job.isFinished():
if job.isFailed(False):
print 'Job '+job.getJobname()+' failed. Not doing anything...'
myJobs.remove(job)
from grisu.frontend.control.login import LoginManager
from grisu.frontend.model.job import JobObject
import sys
# create a service interface to the BeSTGRID backend
service_interface = LoginManager.loginCommandline("BeSTGRID")
print 'Creating job object...'
job = JobObject(service_interface)
job.setJobname("echo_job-1") # job name must be unique
print 'Set jobname to: ' + job.getJobname()
# set the name of the application as it is published in MDS.
# "generic" means not to use MDS for the lookup.
job.setApplication("generic")
# "generic" jobs require a submission location to be specified
job.setSubmissionLocation("all.q:ng2.scenzgrid.org#SGE")
# set the command that needs to be executed
job.setCommandline("echo \"Hello World\"")
# create the job on the backend and specify the VO to use
job.createJob("/ARCS/BeSTGRID")
print 'Submitting job...'
# submit the job
job.submitJob()
print 'Waiting for the job to finish...'
# this waits until the job is finished. Checks every 10 seconds (which would be too often for a real job)
finished = job.waitForJobToFinish(10)
# Setting the number of jobs to be submitted
job_count = 5
# Since there may be many jobs submitted in the workshop, lets make them a bit unique to avoid issues.
base_job_name = str(random.randint(10000, 99999)) + '-hello-'
print "INFO: Base job name is " + base_job_name
# There are three stages, creating the jobs, submitting the jobs, then after they have finished, retrieving the job outputs
# Creating a list of jobs
jobs = []
print "INFO: Defining " + str(job_count) + " helloworld jobs"
for i in range(1, job_count + 1):
print "INFO: Defining job " + str(i) + " of " + str(job_count)
#The next lines define the actual job's parameters
job = JobObject(service_interface) # Create a job
job.setJobname(base_job_name + str(i)) # Give it a (hopefully) unique name
job.setApplication("python") # Set the application being run
job.setApplicationVersion(
"2.4") # Set the application version, note this is an exact match
# job.setSubmissionLocation("all.q:ng2.scenzgrid.org#SGE") # Set the location the job will be submitted to
job.addInputFileUrl(os.path.join(current_dir,
"helloworld.py")) # Add a file
job.setCommandline("python helloworld.py") # Set the command to be run
print "INFO: job " + job.getJobname() + " defined"
jobs.append(job)
# Submit the jobs to be run
# Note the exception catching to give more information about a job failing
for job in jobs:
time_start = time.time()
