def test_clipRaster(self):
"""Raster layers can be clipped
"""
# Create a raster layer
myName = 'shake'
myRasterLayer = QgsRasterLayer(RASTERPATH, myName)
myMessage = 'Did not find layer "%s" in path "%s"' % (myName,
RASTERPATH)
assert myRasterLayer is not None, myMessage
# Create a bounding box
myRect = [97, -3, 104, 1]
# Clip the vector to the bbox
myResult = clipLayer(myRasterLayer, myRect)
# Check the output is valid
assert os.path.exists(myResult)
# Clip and give a desired resolution for the output
mySize = 0.05
myResult = clipLayer(myRasterLayer, myRect, mySize)
myNewRasterLayer = QgsRasterLayer(myResult, myName)
assert myNewRasterLayer.isValid(), 'Resampled raster is not valid'
myMessage = ('Resampled raster has incorrect pixel size.'
'Expected: %f, Actual: %f' %
(mySize, myNewRasterLayer.rasterUnitsPerPixel()))
assert myNewRasterLayer.rasterUnitsPerPixel() == mySize, myMessage
def test_vectorProjections(self):
"""Test that vector input data is reprojected properly during clip"""
# Input data is OSM in GOOGLE CRS
# We are reprojecting to GEO and expecting the output shp to be in GEO
# see https://github.com/AIFDR/inasafe/issues/119
# and https://github.com/AIFDR/inasafe/issues/95
myVectorLayer = QgsVectorLayer(VECTOR_PATH2,
'OSM Buildings',
'ogr')
myMessage = 'Failed to load osm buildings'
assert myVectorLayer is not None, myMessage
assert myVectorLayer.isValid()
setCanvasCrs(GEOCRS, True)
setJakartaGeoExtent()
myClipRect = [106.52, -6.38, 107.14, -6.07]
# Clip the vector to the bbox
myResult = clipLayer(myVectorLayer, myClipRect)
assert(os.path.exists(myResult))
def testRasterScaling_projected(self):
"""Attempt to scale projected density raster layers raise exception
Automatic scaling when resampling density data
does not currently work for projected layers. See issue #123.
For the time being this test checks that an exception is raised
when scaling is attempted on projected layers.
When we resolve issue #123, this test should be rewritten.
"""
myTestFilename = 'Population_Jakarta_UTM48N.tif'
myRasterPath = ('%s/%s' % (TESTDATA, myTestFilename))
# Get reference values
mySafeLayer = readSafeLayer(myRasterPath)
myMinimum, myMaximum = mySafeLayer.get_extrema()
myNativeResolution = mySafeLayer.get_resolution()
print
print myMinimum, myMaximum
print myNativeResolution
# Define bounding box in EPSG:4326
myBoundingBox = [106.61, -6.38, 107.05, -6.07]
# Test for a range of resolutions
for myResolution in [0.02, 0.01, 0.005, 0.002, 0.001]:
# Clip the raster to the bbox
myExtraKeywords = {'resolution': myNativeResolution}
myRasterLayer = QgsRasterLayer(myRasterPath, 'xxx')
try:
myResult = clipLayer(myRasterLayer,
myBoundingBox,
myResolution,
theExtraKeywords=myExtraKeywords)
del myResult
except InvalidProjectionException:
pass
else:
myMessage = 'Should have raised InvalidProjectionException'
raise Exception(myMessage)
def test_clipVector(self):
"""Vector layers can be clipped
"""
# Create a vector layer
myName = 'padang'
myVectorLayer = QgsVectorLayer(VECTOR_PATH, myName, 'ogr')
myMessage = 'Did not find layer "%s" in path "%s"' % (myName,
VECTOR_PATH)
assert myVectorLayer is not None, myMessage
assert myVectorLayer.isValid()
# Create a bounding box
myRect = [100.03, -1.14, 100.81, -0.73]
# Clip the vector to the bbox
myResult = clipLayer(myVectorLayer, myRect)
# Check the output is valid
assert(os.path.exists(myResult))
def testRasterScaling(self):
"""Raster layers can be scaled when resampled
This is a test for ticket #52
Native test .asc data has
Population_Jakarta_geographic.asc
ncols 638
nrows 649
cellsize 0.00045228819716044
Population_2010.asc
ncols 5525
nrows 2050
cellsize 0.0083333333333333
Scaling is necessary for raster data that represents density
such as population per km^2
"""
for myFilename in ['Population_Jakarta_geographic.asc',
'Population_2010.asc']:
myRasterPath = ('%s/%s' % (TESTDATA, myFilename))
# Get reference values
mySafeLayer = readSafeLayer(myRasterPath)
myMinimum, myMaximum = mySafeLayer.get_extrema()
del myMaximum
del myMinimum
myNativeResolution = mySafeLayer.get_resolution()
# Get the Hazard extents as an array in EPSG:4326
myBoundingBox = mySafeLayer.get_bounding_box()
# Test for a range of resolutions
for myResolution in [0.02,
0.01,
0.005,
0.002,
0.001,
0.0005, # Coarser
0.0002]: # Finer
# To save time only do two resolutions for the
# large population set
if myFilename.startswith('Population_2010'):
if myResolution > 0.01 or myResolution < 0.005:
break
# Clip the raster to the bbox
myExtraKeywords = {'resolution': myNativeResolution}
myRasterLayer = QgsRasterLayer(myRasterPath, 'xxx')
myResult = clipLayer(myRasterLayer,
myBoundingBox,
myResolution,
theExtraKeywords=myExtraKeywords)
mySafeLayer = readSafeLayer(myResult)
myNativeData = mySafeLayer.get_data(scaling=False)
myScaledData = mySafeLayer.get_data(scaling=True)
mySigma = (mySafeLayer.get_resolution()[0] /
myNativeResolution[0]) ** 2
# Compare extrema
myExpectedScaledMax = mySigma * numpy.nanmax(myNativeData)
myMessage = ('Resampled raster was not rescaled correctly: '
'max(myScaledData) was %f but expected %f'
% (numpy.nanmax(myScaledData), myExpectedScaledMax))
# FIXME (Ole): The rtol used to be 1.0e-8 -
# now it has to be 1.0e-6, otherwise we get
# max(myScaledData) was 12083021.000000 but
# expected 12083020.414316
# Is something being rounded to the nearest
# integer?
assert numpy.allclose(myExpectedScaledMax,
numpy.nanmax(myScaledData),
rtol=1.0e-6, atol=1.0e-8), myMessage
myExpectedScaledMin = mySigma * numpy.nanmin(myNativeData)
myMessage = ('Resampled raster was not rescaled correctly: '
'min(myScaledData) was %f but expected %f'
% (numpy.nanmin(myScaledData), myExpectedScaledMin))
assert numpy.allclose(myExpectedScaledMin,
numpy.nanmin(myScaledData),
rtol=1.0e-8, atol=1.0e-12), myMessage
# Compare elementwise
myMessage = 'Resampled raster was not rescaled correctly'
assert nanallclose(myNativeData * mySigma, myScaledData,
rtol=1.0e-8, atol=1.0e-8), myMessage
# Check that it also works with manual scaling
myManualData = mySafeLayer.get_data(scaling=mySigma)
myMessage = 'Resampled raster was not rescaled correctly'
assert nanallclose(myManualData, myScaledData,
rtol=1.0e-8, atol=1.0e-8), myMessage
# Check that an exception is raised for bad arguments
try:
mySafeLayer.get_data(scaling='bad')
except:
pass
else:
myMessage = 'String argument should have raised exception'
raise Exception(myMessage)
try:
mySafeLayer.get_data(scaling='(1, 3)')
except:
pass
else:
myMessage = 'Tuple argument should have raised exception'
raise Exception(myMessage)
# Check None option without keyword datatype == 'density'
mySafeLayer.keywords['datatype'] = 'undefined'
myUnscaledData = mySafeLayer.get_data(scaling=None)
myMessage = 'Data should not have changed'
assert nanallclose(myNativeData, myUnscaledData,
rtol=1.0e-12, atol=1.0e-12), myMessage
# Try with None and density keyword
mySafeLayer.keywords['datatype'] = 'density'
myUnscaledData = mySafeLayer.get_data(scaling=None)
myMessage = 'Resampled raster was not rescaled correctly'
assert nanallclose(myScaledData, myUnscaledData,
rtol=1.0e-12, atol=1.0e-12), myMessage
mySafeLayer.keywords['datatype'] = 'counts'
myUnscaledData = mySafeLayer.get_data(scaling=None)
myMessage = 'Data should not have changed'
assert nanallclose(myNativeData, myUnscaledData,
rtol=1.0e-12, atol=1.0e-12), myMessage
def test_clipBoth(self):
"""Raster and Vector layers can be clipped
"""
# Create a vector layer
myName = 'padang'
myVectorLayer = QgsVectorLayer(VECTOR_PATH, myName, 'ogr')
myMessage = 'Did not find layer "%s" in path "%s"' % (myName,
VECTOR_PATH)
assert myVectorLayer.isValid(), myMessage
# Create a raster layer
myName = 'shake'
myRasterLayer = QgsRasterLayer(RASTERPATH, myName)
myMessage = 'Did not find layer "%s" in path "%s"' % (myName,
RASTERPATH)
assert myRasterLayer.isValid(), myMessage
# Create a bounding box
myViewportGeoExtent = [99.53, -1.22, 101.20, -0.36]
# Get the Hazard extents as an array in EPSG:4326
myHazardGeoExtent = [myRasterLayer.extent().xMinimum(),
myRasterLayer.extent().yMinimum(),
myRasterLayer.extent().xMaximum(),
myRasterLayer.extent().yMaximum()]
# Get the Exposure extents as an array in EPSG:4326
myExposureGeoExtent = [myVectorLayer.extent().xMinimum(),
myVectorLayer.extent().yMinimum(),
myVectorLayer.extent().xMaximum(),
myVectorLayer.extent().yMaximum()]
# Now work out the optimal extent between the two layers and
# the current view extent. The optimal extent is the intersection
# between the two layers and the viewport.
# Extent is returned as an array [xmin,ymin,xmax,ymax]
myGeoExtent = getOptimalExtent(myHazardGeoExtent,
myExposureGeoExtent,
myViewportGeoExtent)
# Clip the vector to the bbox
myResult = clipLayer(myVectorLayer, myGeoExtent)
# Check the output is valid
assert os.path.exists(myResult)
readSafeLayer(myResult)
# Clip the raster to the bbox
myResult = clipLayer(myRasterLayer, myGeoExtent)
# Check the output is valid
assert os.path.exists(myResult)
readSafeLayer(myResult)
# -------------------------------
# Check the extra keywords option
# -------------------------------
# Clip the vector to the bbox
myResult = clipLayer(myVectorLayer, myGeoExtent,
theExtraKeywords={'kermit': 'piggy'})
# Check the output is valid
assert os.path.exists(myResult)
L = readSafeLayer(myResult)
kwds = L.get_keywords()
myMessage = 'Extra keyword was not found in %s: %s' % (myResult, kwds)
assert kwds['kermit'] == 'piggy'
# Clip the raster to the bbox
myResult = clipLayer(myRasterLayer, myGeoExtent,
theExtraKeywords={'zoot': 'animal'})
# Check the output is valid
assert os.path.exists(myResult)
L = readSafeLayer(myResult)
kwds = L.get_keywords()
myMessage = 'Extra keyword was not found in %s: %s' % (myResult, kwds)
assert kwds['zoot'] == 'animal', myMessage