for i_eid in range(0, len(eIDs)):
eid = eIDs[i_eid]
outname = f'{eid}__extqc.npz'
outfile = Path.joinpath(outdir, outname)
if (eid not in list_eid_reject) and \
(outname not in os.listdir(outdir)):
# Show session number and start compute time counter for session
print(
f'Rig {i_ephysrig + 1} / {len(ephys_rig)} : {rig_location}'
f' -- Sessions remaining: {len(eIDs)-len(os.listdir(outdir))-1}'
f' -- {eid}')
try:
# -- Dowload data if necessary
oneutils.download_bpodqc_raw_data(eid, one=one)
ext = ExtendedQC(eid=eid, one=one, lazy=False)
criteria, out_var_test_status, out_var_sess_status = \
compute_session_status(ext.frame)
d = {
'sess_status': out_var_sess_status,
'eid': eid,
'rig_location': rig_location
}
sess_dataframe = pd.DataFrame(data=d, index=[0])
# Append and save table
app_token = {
'sess_details': sess_dataframe,
def test_BpodQC(self):
# Make sure the data exists locally
download_bpodqc_raw_data(self.eid, one=self.one)
bpodqc = BpodQC(self.eid, one=self.one, lazy=False)
self.assertTrue(bpodqc is not None)