def loadSettings(self, settings): if type(settings) is str: if os.path.exists(settings): settingsDict = inLib.load_settings(settings) settings = settingsDict if type(settings) is dict: try: roi = settings['roi'] x0 = roi[0] y0 = roi[2] xsize = roi[1] - x0 ysize = roi[3] - y0 print(("Setting ROI to: %i,%i. And size: %i,%i." % (x0, y0, xsize, ysize))) self._setROI(x0, y0, xsize, ysize) time.sleep(0.05) self._setROI(x0, y0, xsize, ysize) except: print("Unable to set new ROI") try: exposure_time = settings['exposure_time'] print(("Setting exposure time to: %.2f ms" % (exposure_time * 1000))) self.setExposureTime(exposure_time, inMillisec=False) except: print("Unable to set new timings")
def newSettings(self, filename): settings_dict = inLib.load_settings(filename) if settings_dict.has_key('devices'): settings_dict = settings_dict['devices']['shutters']['settings']#['channel_settings'] settings_dict['settings_filename'] = filename self.saved_settings = [settings_dict] + self.saved_settings return self.saved_settings
def newSettings(self, filename, settings_dict=None): if settings_dict is None: settings_dict = inLib.load_settings(filename) if settings_dict.has_key('devices'): settings_dict = settings_dict['devices']['camera'] settings_dict['settings_filename'] = filename self.saved_settings = [settings_dict] + self.saved_settings
def newSettings(self, filename): settings_dict = inLib.load_settings(filename) if 'devices' in settings_dict: settings_dict = settings_dict['devices']['shutters']['settings']#['channel_settings'] settings_dict['settings_filename'] = filename self.saved_settings = [settings_dict] + self.saved_settings return self.saved_settings
def newSettings(self, filename, settings_dict=None): if settings_dict is None: settings_dict = inLib.load_settings(filename) if settings_dict.has_key('devices'): settings_dict = settings_dict['devices']['camera']['settings'] print settings_dict settings_dict['settings_filename'] = filename self.saved_settings = [settings_dict] + self.saved_settings return self.saved_settings
def newSettings(self, filename, settings_dict=None): if settings_dict is None: settings_dict = inLib.load_settings(filename) if 'devices' in settings_dict: settings_dict = settings_dict['devices']['camera']['settings'] print(settings_dict) settings_dict['settings_filename'] = filename self.saved_settings = [settings_dict] + self.saved_settings return self.saved_settings
def __init__(self): ''' Reads the settings and loads all specified devices and modules. Sets up instrument-wide properties and calls the UI. ''' print('inControl: Starting up...') if len(sys.argv) > 1: settings_filename = sys.argv[1] else: print('Loading default settings.') settings_filename = 'settings_default.yaml' self._settings = inLib.load_settings(settings_filename) # 1. Call device UI APIs #: A dictionary of all devices run by InControl. #: The keys are the name of a device, the value is an instance of the device's #: Control class. This dictionary is updated into the namespace of InControl's main #: control class. Devices are simple implementations to control one device. self._device_controls = {} if self._settings['devices']: for device in self._settings['devices']: device_dict = self._settings['devices'][device] if device_dict['active']: device_path = inLib.get_device_path(device_dict) device_module = inLib.import_module(device_path) device_settings_dict = device_dict['settings'] device_settings_dict[ 'settings_filename'] = settings_filename print(device_settings_dict) device_control = device_module.Control( device_settings_dict) self._device_controls[device] = inLib.CommandQueue( device_control) self.__dict__.update(self._device_controls) # 2. Call module UI APIs #: A dictionary of all modules run by InControl. #: The keys are the name of a module, the value is an instance of the module's #: Control class. This dictionary is updated into the namespace of InControl's main #: control class. InControl modules do not run a particular device, but have access to #: all device and other module control classes. Therefore, InControl's main control class #: is passed to the module object upon initiation. Modules should be used whenever a task #: with multiple devices needs to be performed. self._module_controls = {} for module in self._settings['modules']: if self._settings['modules'][module]['active']: module_path = inLib.get_module_path(module) module_module = inLib.import_module(module_path) module_settings = self._settings['modules'][module]['settings'] module_control = module_module.Control(self, module_settings) self._module_controls[module] = inLib.CommandQueue( module_control) self.__dict__.update(self._module_controls) self.setWorkingDir(self._settings['working_dir'])
def newSettings(self, settings): if type(settings) is str: if os.path.exists(settings): settingsDict = inLib.load_settings(settings) settingsDict['settings_filename'] = settings settings = settingsDict if type(settings) is dict: if not settings.has_key('settings_filename'): settings['settings_filename'] = 'unknown' self.savedSettings = [settings] + self.savedSettings return self.savedSettings
def newSettings(self, settings): if type(settings) is str: if os.path.exists(settings): settingsDict = inLib.load_settings(settings) settingsDict['settings_filename'] = settings settings = settingsDict if type(settings) is dict: if not settings.has_key('settings_filename'): settings['settings_filename'] = 'unknown' self.savedSettings = [settings] + self.savedSettings return self.savedSettings
def loadSettings(self, settings): if type(settings) is str: if os.path.exists(settings): settingsDict = inLib.load_settings(settings) settings = settingsDict if type(settings) is dict: try: roi = settings['roi'] x0 = roi[0] y0 = roi[2] xsize = roi[1] - x0 ysize = roi[3] - y0 print "Setting ROI to: %i,%i. And size: %i,%i." % (x0,y0,xsize,ysize) self._setROI(x0,y0,xsize,ysize) time.sleep(0.05) self._setROI(x0,y0,xsize,ysize) except: print "Unable to set new ROI" try: exposure_time = settings['exposure_time'] print "Setting exposure time to: %.2f ms" % (exposure_time*1000) self.setExposureTime(exposure_time, inMillisec=False) except: print "Unable to set new timings"
def loadSettings(self, settings): if type(settings) is str: if os.path.exists(settings): settingsDict = inLib.load_settings(settings) settings = settingsDict if type(settings) is dict: self._api.setTemperature(settings['temperature']) self._api.setExposureTime(settings['exposure_time']) self._setADChannel(settings['ad_channel']) self._setROIAndBinning(settings['roi'], settings['binning']) self._setHSSpeed(settings['ad_channel'], settings['hs_speed']) self._api.setVSAmplitude(settings['vs_amplitude']) self._setEMCCDGain(settings['em_gain']) self._setVSSpeed(settings['vs_speed']) self._setPreAmpGain(settings['preamp_gain']) self._api.setAcquisitionMode(settings['acquisition_mode']) self._api.setReadMode(settings['read_mode']) self._api.setTriggerMode(settings['trigger_mode']) self._api.setKineticCycleTime(settings['kinetic_time']) self._api.setEMGainMode(settings['em_gain_mode']) self._api.setBaselineClamp(settings['baseline_clamp']) self._api.setFrameTransferMode(settings['frame_transfer_mode'])