def test_find_dir(self):
"""
Given a valid run directory, show as new
:return:
"""
directory = path.join(path_to_module, "three_dirs", "first")
res = Parser.find_single_run(directory)
self.assertEqual(type(res), model.DirectoryStatus)
self.assertEqual(res.status, "new")
self.assertEqual(res.directory, directory)
def test_find_in_dir_with_three_dirs(self):
"""
Given a directory with directories in it (but no actual run at highest level), show as invalid
:return:
"""
directory = path.join(path_to_module, "three_dirs")
res = Parser.find_single_run(directory)
self.assertEqual(type(res), model.DirectoryStatus)
self.assertEqual(res.status, "invalid")
self.assertEqual(res.directory, directory)
def test_find_none(self):
"""
Given a directory with nothing in it, show as invalid
:return:
"""
directory = path.join(path_to_module, "no_dirs")
res = Parser.find_single_run(directory)
self.assertEqual(type(res), model.DirectoryStatus)
self.assertEqual(res.status, "invalid")
self.assertEqual(res.directory, directory)
def test_find_dir_no_completed_file(self):
"""
Given a run directory with no run completed file, show as invalid
:return:
"""
directory = path.join(path_to_module, "fake_ngs_data_no_completed")
res = Parser.find_single_run(directory)
self.assertEqual(type(res), model.DirectoryStatus)
self.assertEqual(res.status, "invalid")
self.assertEqual(res.directory, directory)