def test_Bidirectional(self):
for return_sequences in [True, False]:
input_dim = 10
sequence_len = 5
model = keras.Sequential()
model.add(keras.layers.Bidirectional(keras.layers.LSTM(10, return_sequences=return_sequences),
input_shape=(5, 10)))
model.add(keras.layers.Dense(5))
model.add(keras.layers.Activation('softmax'))
model.compile(loss='categorical_crossentropy', optimizer='rmsprop')
onnx_model = keras2onnx.convert_keras(model, 'test')
data = np.random.rand(input_dim, sequence_len).astype(np.float32).reshape((1, sequence_len, input_dim))
expected = model.predict(data)
self.assertTrue(self.run_onnx_runtime('bidirectional', onnx_model, data, expected))
for merge_mode in ['concat', None]:
# TODO: case return_sequences=False
for return_sequences in [True]:
input_dim = 10
sequence_len = 5
sub_input1 = keras.layers.Input(shape=(sequence_len, input_dim))
sub_mapped1 = keras.layers.Bidirectional(keras.layers.LSTM(10, return_sequences=return_sequences),
input_shape=(5, 10), merge_mode=merge_mode)(sub_input1)
keras_model = keras.Model(inputs=sub_input1, outputs=sub_mapped1)
onnx_model = keras2onnx.convert_keras(keras_model, 'test_2')
data = np.random.rand(input_dim, sequence_len).astype(np.float32).reshape((1, sequence_len, input_dim))
expected = keras_model.predict(data)
self.assertTrue(self.run_onnx_runtime('bidirectional', onnx_model, data, expected))
def test_timedistributed(self):
keras_model = keras.Sequential()
keras_model.add(keras.layers.TimeDistributed(keras.layers.Dense(8), input_shape=(10, 16)))
# keras_model.output_shape == (None, 10, 8)
onnx_model = keras2onnx.convert_keras(keras_model, keras_model.name, debug_mode=True)
x = np.random.rand(32, 10, 16).astype(np.float32)
expected = keras_model.predict(x)
self.assertTrue(self.run_onnx_runtime(onnx_model.graph.name, onnx_model, x, expected))
keras_model = keras.Sequential()
N, D, W, H, C = 5, 10, 15, 15, 3
keras_model.add(keras.layers.TimeDistributed(keras.layers.Conv2D(64, (3, 3)),
input_shape=(D, W, H, C)))
onnx_model = keras2onnx.convert_keras(keras_model, keras_model.name, debug_mode=True)
x = np.random.rand(N, D, W, H, C).astype(np.float32)
expected = keras_model.predict(x)
self.assertTrue(self.run_onnx_runtime(onnx_model.graph.name, onnx_model, x, expected))
def test_repeat_vector(self):
model = keras.Sequential()
model.add(keras.layers.core.RepeatVector(3, input_shape=(4,)))
onnx_model = keras2onnx.convert_keras(model, model.name)
data = self.asarray(1, 2, 3, 4)
expected = model.predict(data)
self.assertTrue(self.run_onnx_runtime('repeat_vector', onnx_model, data, expected))
def test_permute(self):
model = keras.Sequential()
model.add(keras.layers.core.Permute((2, 1), input_shape=(3, 2)))
onnx_model = keras2onnx.convert_keras(model, model.name)
data = np.array([[[1, 2], [3, 4], [5, 6]]]).astype(np.float32)
expected = model.predict(data)
self.assertTrue(self.run_onnx_runtime('permute', onnx_model, data, expected))
def test_Bidirectional_with_bias(self):
model = keras.Sequential()
model.add(keras.layers.Bidirectional(keras.layers.LSTM(1, return_sequences=False),
input_shape=(1, 1)))
# Set weights(kernel, recurrent_kernel, bias) for forward layer followed by the backward layer
model.set_weights([[[1, 2, 3, 4]], [[5, 6, 7, 8]], [1, 2, 3, 4], [[1, 2, 3, 4]], [[5, 6, 7, 8]], [1, 2, 3, 4]])
onnx_model = keras2onnx.convert_keras(model, 'test')
data = np.random.rand(1, 1).astype(np.float32).reshape((1, 1, 1))
expected = model.predict(data)
self.assertTrue(self.run_onnx_runtime('bidirectional', onnx_model, data, expected))
def test_embedding(self):
model = keras.Sequential()
model.add(keras.layers.Embedding(1000, 64, input_length=10))
input_array = np.random.randint(1000, size=(1, 10)).astype(np.float32)
model.compile('rmsprop', 'mse')
onnx_model = keras2onnx.convert_keras(model, model.name)
expected = model.predict(input_array)
self.assertTrue(self.run_onnx_runtime(onnx_model.graph.name, onnx_model, input_array, expected))
def test_dense(self):
for bias_value in [True, False]:
model = keras.Sequential()
model.add(keras.layers.Dense(5, input_shape=(4,), activation='sigmoid'))
model.add(keras.layers.Dense(3, input_shape=(5,), use_bias=bias_value))
model.compile('sgd', 'mse')
onnx_model = keras2onnx.convert_keras(model, model.name)
data = self.asarray(1, 0, 0, 1)
expected = model.predict(data)
self.assertTrue(self.run_onnx_runtime('dense', onnx_model, data, expected))
def test_keras_with_tf2onnx(self):
try:
import keras2onnx
except (ImportError, AssertionError):
warnings.warn("keras2onnx or one of its dependencies is missing.")
return
from keras2onnx.proto import keras
from keras2onnx.proto.tfcompat import is_tf2
if not is_tf2: # tf2onnx is not available for tensorflow 2.0 yet.
model = keras.Sequential()
model.add(keras.layers.Dense(units=4, input_shape=(10,), activation='relu'))
model.compile(loss='binary_crossentropy', optimizer='Adam', metrics=['binary_accuracy'])
graph_def = keras2onnx.export_tf_frozen_graph(model)
onnx_model = onnxmltools.convert_tensorflow(graph_def, **keras2onnx.build_io_names_tf2onnx(model))
self.assertTrue(len(onnx_model.graph.node) > 0)
def activationlayer_helper(self, layer, data_for_advanced_layer=None, op_version=None):
if op_version is None:
op_version = get_opset_number_from_onnx()
if data_for_advanced_layer is None:
data = self.asarray(-5, -4, -3, -2, -1, 0, 1, 2, 3, 4, 5)
layer = keras.layers.Activation(layer, input_shape=(data.size,))
else:
data = data_for_advanced_layer
model = keras.Sequential()
model.add(layer)
onnx_model = keras2onnx.convert_keras(model, model.name, target_opset=op_version)
expected = model.predict(data)
self.assertTrue(self.run_onnx_runtime(onnx_model.graph.name, onnx_model, data, expected))
def _pooling_test_helper(self, layer, ishape, data_format='channels_last'):
model = keras.Sequential()
if sys.version_info >= (3, 6):
nlayer = layer(data_format=data_format, input_shape=ishape) if \
(layer.__name__.startswith("Global")) else layer(2, data_format=data_format, input_shape=ishape)
else:
nlayer = layer(input_shape=ishape) if \
(layer.__name__.startswith("Global")) else layer(2, input_shape=ishape)
model.add(nlayer)
onnx_model = keras2onnx.convert_keras(model, model.name)
data = np.random.uniform(-0.5, 0.5, size=(1,) + ishape).astype(np.float32)
expected = model.predict(data)
self.assertTrue(self.run_onnx_runtime(onnx_model.graph.name, onnx_model, data, expected))
def _batch_norm_helper(self, data, gamma, beta, scale, center, axis):
model = keras.Sequential()
layer = keras.layers.BatchNormalization(
axis=axis,
input_shape=data.shape[1:],
moving_mean_initializer=keras.initializers.constant(np.mean(data)),
moving_variance_initializer=keras.initializers.constant(np.var(data)),
gamma_initializer=gamma,
beta_initializer=beta,
center=center,
scale=scale,
)
model.add(layer)
onnx_model = keras2onnx.convert_keras(model, model.name)
expected = model.predict(data)
self.assertTrue(self.run_onnx_runtime(onnx_model.graph.name, onnx_model, data, expected))
def _conv_helper(self, layer_type, input_channels, output_channels, kernel_size, strides, input_size, activation,
rtol, atol, bias, channels_first=False, padding='valid'):
model = keras.Sequential()
input_size_seq = (input_size,) if isinstance(input_size, int) else input_size
kwargs = {}
if channels_first:
input_shape = (input_channels,) + input_size_seq
if not isinstance(layer_type, keras.layers.Conv1D):
kwargs['data_format'] = 'channels_first'
else:
input_shape = input_size_seq + (input_channels,)
model.add(layer_type(output_channels, kernel_size, input_shape=input_shape, strides=strides, padding=padding,
dilation_rate=1, activation=activation, use_bias=bias, **kwargs))
data = np.random.uniform(-0.5, 0.5, size=(1,) + input_shape).astype(np.float32)
onnx_model = keras2onnx.convert_keras(model, model.name)
expected = model.predict(data)
self.assertTrue(self.run_onnx_runtime(onnx_model.graph.name, onnx_model, data, expected, rtol=rtol, atol=atol))
