def _model(self,
layer_inp,
inp_corruption_type=None,
inp_corruption_level=0,
hid_corruption_type=None,
hid_corruption_level=0,
L1_hiddens=0,
L2_weights=0):
# Make model
act = self.act
inp = corrupt(layer_inp, inp_corruption_type, inp_corruption_level)
hid = act(T.dot(inp, self.params.w_enc) + self.params.b)
hid = corrupt(hid, hid_corruption_type, hid_corruption_level)
out = T.dot(hid, self.params.w_dec)
# Make cost function
cost = T.mean((0.5 * (out - layer_inp)**2).sum(axis=1))
# Add L1 hiddens cost
if L1_hiddens > 0:
cost += L1_hiddens * abs(hid).sum(1).mean()
# Add L2 weight cost
if L2_weights > 0:
cost += L2_weights * ((self.params.w_enc**2.).sum() +
(self.params.w_dec**2.).sum())
return hid, cost
def _model(self, layer_inp,
inp_corruption_type=None,
inp_corruption_level=0,
hid_corruption_type = None,
hid_corruption_level = 0,
cost_dropout_level = 0,
L1_hiddens = 0,
L2_weights = 0):
# For conciseness
act = self.act
# DC centering
inp = layer_inp - self.params.dc
# Contrast normalization
inp /= self.params.std
# Corrupt input
enc = corrupt(inp, inp_corruption_type, inp_corruption_level)
# Apply PCA
enc = T.dot(enc, self.params.pca)
# Encode
enc = act(T.dot(enc, self.params.w_enc) + self.params.b)
# Corrupt encoder output
enc = corrupt(enc, hid_corruption_type, hid_corruption_level)
# Decode
dec = T.dot(enc, self.params.w_dec)
# Reverse PCA
dec = T.dot(dec, self.params.pca.T)
# Make cost function
cost = corrupt(0.5*(dec - inp)**2, 'zeromask', cost_dropout_level)
cost = T.mean(cost.sum(axis = 1))
# Add L1 hiddens cost
if L1_hiddens > 0:
cost += L1_hiddens * T.sum(abs(enc))
# Add L2 weight cost
if L2_weights > 0:
cost += L2_weights * ((self.params.w_enc**2.).sum() +
(self.params.w_dec**2.).sum())
# Add orthogonality cost
# dot = T.dot(self.params.w_enc.T, self.params.w_enc)
# cost += 0.000000000000000001 * T.sum(abs(dot - T.zeros_like(dot)))
return enc, cost
def enc(self, x, corruption_type=None, corruption_level=0):
# For readability
W = self.params().encoder_weights
b = self.params().selection_biases
f = self.params().selection_factor
inp_act = self.params.hp.inp_act
#sel_act = self.params.hp.sel_act
variant = self.params.hp.variant
# Corrupt input
x = corrupt(x, corruption_type, corruption_level)
# Scale if using biased noise
x = x / T.cast(
1 - corruption_level, th.config.floatX
) if corruption_type == 'zeromask' and corruption_level > 0 else x
# Compute input activation
x = inp_act(batchdot(x, W))
if variant == 'sigmoid_product':
x = sigmoid(x.prod(0) + b) * x
elif variant == 'tanh_product':
x = tanh(x.prod(0) * f) * x
elif variant == 'step_product':
x = step(x.prod(0) - 0.01) * x
elif variant == 'step_sum':
x = step(x.sum(0) - 1) * x
# Encode
return x
def __init__(self, params, model_inp, layer_inp, corruption_type=None, corruption_level=0):
# Parameters
self.params = params
self.model_inp = model_inp
self.layer_inp = layer_inp
self.corruption_type = corruption_type
self.corruption_level = corruption_level
# corrupt input
corr_inp = corrupt(layer_inp, corruption_type, corruption_level)
out = []
self.nb_channels = 0
if params.mean_filter_size!= 0:
out += [params.m_act(conv(corr_inp, params.mean_filters) + params.mean_b.dimshuffle('x', 0, 'x', 'x'))]
self.nb_channels += params.mean_filter_size[0]
if params.cov_filter_size != 0:
f = conv(corr_inp, params.cov_filters)**2
out += [params.c_act(conv(f, params.cov_mapping) + params.cov_b.dimshuffle('x', 0, 'x', 'x'))]
self.nb_channels += params.map_filter_size[0]
self.out = T.concatenate(out, axis=1)
def enc(self, x, corruption_type=None, corruption_level=0):
# For readability
W = self.params().encoder_weights
# Corrupt input
x = corrupt(x, corruption_type, corruption_level)
# Encode, max and return
return batchdot(x, W)
def dec(self, h, corruption_type=None, corruption_level=0):
# For readability
W = self.params().encoder_weights
# Corrupt input
h = corrupt(h, corruption_type, corruption_level)
# Maxout and decode
return batchdot(h * eq(h, h.max(0, keepdims=True)),
W.dimshuffle(0, 2, 1)).sum(0)
def __init__(self, inp, labels, nb_in, nb_out, dropout_level=0):
"""
numeric regression layer
"""
###########################################################################################
# Storage
self.nb_in = nb_in
self.nb_out = nb_out
self.dropout_level = dropout_level
###########################################################################################
# Learn model
# Weight initialization
self.B = th.shared(np.zeros(nb_out, dtype=th.config.floatX),
borrow=False,
name='Numeric regression biases')
self.W = th.shared(np.random.uniform(low=-1. / np.sqrt(nb_in),
high=1. / np.sqrt(nb_in),
size=(nb_in, nb_out)).astype(
th.config.floatX),
borrow=False,
name='Numeric regression weights')
# Corrupted model
noisy_inp = corrupt(inp, 'zeromask' if dropout_level > 0 else None,
dropout_level)
self.noisy_pred = T.dot(noisy_inp, self.W) + self.B
self.noisy_cost = T.sum(
(0.5 * (self.noisy_pred - labels)**2).sum(axis=1))
# Clean model
clean_inp = inp
self.clean_pred = (T.dot(clean_inp, self.W) + self.B) / T.cast(
1 - dropout_level, th.config.floatX)
self.clean_cost = T.mean(
(0.5 * (self.clean_pred - labels)**2).sum(axis=1))
# Prediction model
self.pred = self.clean_pred
# Prediction error (for compatibility with supervised learning algorithm)
self.error = T.mean(abs(self.clean_pred - labels))
###########################################################################################
# For for interactions with other models
self.inp = inp
self.labels = labels
self.out = self.clean_pred
self.params = [self.W, self.B]
def dec(self, h, corruption_type=None, corruption_level=0):
# For readability
W = self.params().encoder_weights
S = self.params.encoder_selection
# Corrupt input
h = corrupt(h, corruption_type, corruption_level)
# Scale if using biased noise
h = h / T.cast(1-corruption_level, th.config.floatX) if corruption_type == 'zeromask' and corruption_level > 0 else h
# Decode
return T.dot(T.dot(h, S.T), W.T)
def _model(self,
inp,
inp_corruption_type=None,
inp_corruption_level=0,
hid_corruption_type=None,
hid_corruption_level=0,
L1_hiddens=0,
L2_weights=0):
# Encoder
#enc_input_sz = self.input_sz
#enc_filter_sz = self.filter_sz
corr_inp = corrupt(inp, inp_corruption_type, inp_corruption_level)
hid = self.act(
conv(corr_inp, self.params.w_enc, border_mode='valid') +
self.params.b_enc.dimshuffle('x', 0, 'x', 'x'))
# Decoder
#dec_input_sz = (enc_input_sz[0], enc_filter_sz[0], enc_input_sz[2]-enc_filter_sz[2]+1, enc_input_sz[3]-enc_filter_sz[3]+1)
#dec_filter_sz = (int(np.prod(enc_input_sz[1:])), enc_filter_sz[0], 1, 1)
corr_hid = corrupt(hid, hid_corruption_type, hid_corruption_level)
out = conv(corr_hid, self.params.w_dec, border_mode='valid')
# Make cost function
cost = T.mean((0.5 * (out.flatten(2) - inp.flatten(2))**2).sum(axis=1))
# Add L1 hiddens cost
if L1_hiddens > 0:
cost += L1_hiddens * abs(hid).sum(1).mean()
# Add L2 weight cost
if L2_weights > 0:
cost += L2_weights * ((self.params.w_enc**2.).sum() +
(self.params.w_dec**2.).sum())
return hid, cost
def dec(self, h, corruption_type=None, corruption_level=0):
# For readability
W = self.params().encoder_weights
# Corrupt input
h = corrupt(h, corruption_type, corruption_level)
# Scale if using biased noise
h = h / T.cast(
1 - corruption_level, th.config.floatX
) if corruption_type == 'zeromask' and corruption_level > 0 else h
# Decode
return batchdot(h, W.dimshuffle(0, 2, 1))
def dec(self, x, corruption_type=None, corruption_level=0):
# For readability
D = self.params().decoder_weights
# Corrupt input
x = corrupt(x, corruption_type, corruption_level)
# Scale if using biased noise
x = x / T.cast(
1 - corruption_level, th.config.floatX
) if corruption_type == 'zeromask' and corruption_level > 0 else x
# Multiply and decode
return T.dot(x, D)
def enc(self, x, corruption_type=None, corruption_level=0):
# For readability
E = self.params().encoder_weights
b = self.params().encoder_biases
inp_act = self.params.hp.inp_act
# Corrupt input
x = corrupt(x, corruption_type, corruption_level)
# Scale if using biased noise
x = x / T.cast(
1 - corruption_level, th.config.floatX
) if corruption_type == 'zeromask' and corruption_level > 0 else x
# Encode, max and return
return inp_act(T.dot(x, E) + b) - b
def __init__(self,
params,
act,
model_inp,
layer_inp,
corruption_type=None,
corruption_level=0):
# Parameters
self.params = params
self.model_inp = model_inp
self.layer_inp = layer_inp
self.corruption_type = corruption_type
self.corruption_level = corruption_level
# Model
corr_inp = corrupt(layer_inp, corruption_type, corruption_level)
self.out = act(
conv(corr_inp, params.W, border_mode='valid') +
params.B.dimshuffle('x', 0, 'x', 'x'))
def enc(self, x, corruption_type=None, corruption_level=0):
# For readability
W = self.params().encoder_weights
S = self.params.encoder_selection
threshold = T.cast(self.params.hp.threshold, x.dtype)
# Corrupt input
x = corrupt(x, corruption_type, corruption_level)
# Scale if using biased noise
x = x / T.cast(1-corruption_level, th.config.floatX) if corruption_type == 'zeromask' and corruption_level > 0 else x
# Filters
f = relu(T.dot(x, W))
# Selection function
s = step(T.exp(T.dot(T.log(f), S))-threshold)
# Encode
return s * T.dot(f, S)
def _update_model(self):
# Corrupt input
corr_inp = corrupt(self.inp, 'zeromask', self.dropout_level)
# Apply convolution
out = conv(corr_inp, self.params.W,
border_mode='valid') + self.params.B.dimshuffle(
'x', 0, 'x', 'x')
# Remember convolution output shape
out_shape = out.shape
#out_shape = thprint("out.shape = ")(out.shape)
# Reshape to softmax format (2D)
out = out.dimshuffle(0, 2, 3, 1).reshape(
(out.size // self.nb_classes, self.nb_classes))
# Compute class probability
self.prob = softmax(out)
# Class prediction
self.pred = T.argmax(self.prob, axis=1).reshape(
(out_shape[0], out_shape[2], out_shape[3],
out_shape[1] // self.nb_classes)).dimshuffle(0, 3, 1, 2)
# Compute softmax cost
self.cost = -T.mean(
T.log(
self.prob[T.arange(self.prob.shape[0]),
self.conv_labels.dimshuffle(0, 2, 3, 1).flatten()]))
# Reshape class prob to convolutional format
self.prob = self.prob.reshape(
(out_shape[0], out_shape[2], out_shape[3],
out_shape[1])).dimshuffle(0, 3, 1, 2)
# Prediction error
self.error = T.mean(T.neq(self.pred, self.conv_labels))
def __init__(self, model_inp, layer_inp, act, inp_patch_sz, nb_decoders,
nb_inp, nb_hid, corruption_type, corruption_level):
###########################################################################################
# Model
self.act = act
self.nb_inp = nb_inp
self.nb_hid = nb_hid
# Encoder
self.W_enc = th.shared(uniform(low=-1. / np.sqrt(nb_inp),
high=1. / np.sqrt(nb_inp),
size=(nb_inp,
nb_hid)).astype(th.config.floatX),
borrow=True,
name='Encoder weights')
self.b_enc = th.shared(np.zeros(nb_hid, dtype=th.config.floatX),
borrow=True,
name='Encoder biases')
corr_inp = corrupt(layer_inp, corruption_type, corruption_level)
noisy_hiddens = act(T.dot(corr_inp, self.W_enc) + self.b_enc)
clean_hiddens = act(T.dot(layer_inp, self.W) + self.b_enc)
# Using multiple decoders
self.W_dec = []
self.b_dec = []
self.noisy_cost = []
self.clean_cost = []
for dec_ind in range(nb_decoders):
W_dec = th.shared(uniform(low=-1. / nb_hid,
high=1. / nb_hid,
size=(nb_hid,
nb_inp)).astype(th.config.floatX),
borrow=True,
name='Decoder {} weights'.format(dec_ind))
b_dec = th.shared(np.zeros(nb_inp, dtype=th.config.floatX),
borrow=True,
name='Decoder {} biases'.format(dec_ind))
self.W_dec += [W_dec]
self.b_dec += [b_dec]
noisy_recons = T.dot(noisy_hiddens, W_dec) + b_dec
self.noisy_cost += T.mean(
(0.5 * (noisy_recons - layer_inp)**2).sum(axis=1))
clean_recons = T.dot(clean_hiddens, W_dec) + b_dec
self.clean_cost += T.mean(
(0.5 * (clean_recons - layer_inp)**2).sum(axis=1))
# Using multiple masks
###########################################################################################
# For for interactions with other models
self.inp = layer_inp
self.out = clean_hiddens
self.params = [self.W, self.b_enc] + self.W_dec + self.b_dec
self.encoder_params = [self.W, self.b_enc]
###########################################################################################
# Trainer object
self.trainer = sgd(model_inp, self.noisy_cost, self.clean_cost,
self.params)
