def __init__(self, idx_file, log_file="gene_panel_creator.log", **kwargs):
"""Initialize runner & run options"""
libgpc.setup_logging(log_file)
self.logger = logging.getLogger("gene_panel_creator")
self.idx_file = idx_file
self.out_fmt = GPCOptions(**kwargs)
def setUp(self):
# Get rid of log messages
setup_logging(os.devnull)