def Import(context, request):
""" PANalytical - Omnia Axios_XRF analysis results
"""
infile = request.form["panalytical_omnia_axios_file"]
fileformat = request.form["panalytical_omnia_axios_format"]
artoapply = request.form["panalytical_omnia_axios_artoapply"]
override = request.form["panalytical_omnia_axios_override"]
sample = request.form.get("panalytical_omnia_axios_sample", "requestid")
instrument = request.form.get("panalytical_omnia_axios_instrument", None)
errors = []
logs = []
warns = []
# Load the most suitable parser according to file extension/options/etc...
parser = None
if not hasattr(infile, "filename"):
errors.append(_("No file selected"))
if fileformat == "csv":
parser = AxiosXrfCSVParser(infile)
elif fileformat == "csv_multi":
parser = AxiosXrfCSVMultiParser(infile)
else:
errors.append(t(_("Unrecognized file format ${file_format}", mapping={"file_format": fileformat})))
if parser:
# Load the importer
status = ["sample_received", "attachment_due", "to_be_verified"]
if artoapply == "received":
status = ["sample_received"]
elif artoapply == "received_tobeverified":
status = ["sample_received", "attachment_due", "to_be_verified"]
over = [False, False]
if override == "nooverride":
over = [False, False]
elif override == "override":
over = [True, False]
elif override == "overrideempty":
over = [True, True]
sam = ["getRequestID", "getSampleID", "getClientSampleID"]
if sample == "requestid":
sam = ["getRequestID"]
if sample == "sampleid":
sam = ["getSampleID"]
elif sample == "clientsid":
sam = ["getClientSampleID"]
elif sample == "sample_clientsid":
sam = ["getSampleID", "getClientSampleID"]
importer = AxiosXrfImporter(
parser=parser,
context=context,
idsearchcriteria=sam,
allowed_ar_states=status,
allowed_analysis_states=None,
override=over,
instrument_uid=instrument,
)
tbex = ""
try:
importer.process()
except:
tbex = traceback.format_exc()
errors = importer.errors
logs = importer.logs
warns = importer.warns
if tbex:
errors.append(tbex)
results = {"errors": errors, "log": logs, "warns": warns}
return json.dumps(results)
def get_mail_subject(self, ar):
""" Returns the email subject in accordance with the client
preferences
"""
client = ar.aq_parent
subject_items = client.getEmailSubject()
ai = co = cr = cs = False
if 'ar' in subject_items:
ai = True
if 'co' in subject_items:
co = True
if 'cr' in subject_items:
cr = True
if 'cs' in subject_items:
cs = True
ais = []
cos = []
crs = []
css = []
blanks_found = False
if ai:
ais.append(ar.getRequestID())
if co:
if ar.getClientOrderNumber():
if not ar.getClientOrderNumber() in cos:
cos.append(ar.getClientOrderNumber())
else:
blanks_found = True
if cr or cs:
sample = ar.getSample()
if cr:
if sample.getClientReference():
if not sample.getClientReference() in crs:
crs.append(sample.getClientReference())
else:
blanks_found = True
if cs:
if sample.getClientSampleID():
if not sample.getClientSampleID() in css:
css.append(sample.getClientSampleID())
else:
blanks_found = True
line_items = []
if ais:
ais.sort()
li = t(_('ARs: ${ars}', mapping={'ars': ', '.join(ais)}))
line_items.append(li)
if cos:
cos.sort()
li = t(_('Orders: ${orders}', mapping={'orders': ', '.join(cos)}))
line_items.append(li)
if crs:
crs.sort()
li = t(_('Refs: ${references}', mapping={'references':', '.join(crs)}))
line_items.append(li)
if css:
css.sort()
li = t(_('Samples: ${samples}', mapping={'samples': ', '.join(css)}))
line_items.append(li)
tot_line = ' '.join(line_items)
if tot_line:
subject = t(_('Analysis results for ${subject_parts}',
mapping={'subject_parts':tot_line}))
if blanks_found:
subject += (' ' + t(_('and others')))
else:
subject = t(_('Analysis results'))
return subject, tot_line
def get_mail_subject(self, ar):
""" Returns the email subject in accordance with the client
preferences
"""
client = ar.aq_parent
subject_items = client.getEmailSubject()
ai = co = cr = cs = False
if 'ar' in subject_items:
ai = True
if 'co' in subject_items:
co = True
if 'cr' in subject_items:
cr = True
if 'cs' in subject_items:
cs = True
ais = []
cos = []
crs = []
css = []
blanks_found = False
if ai:
ais.append(ar.getRequestID())
if co:
if ar.getClientOrderNumber():
if not ar.getClientOrderNumber() in cos:
cos.append(ar.getClientOrderNumber())
else:
blanks_found = True
if cr or cs:
sample = ar.getSample()
if cr:
if sample.getClientReference():
if not sample.getClientReference() in crs:
crs.append(sample.getClientReference())
else:
blanks_found = True
if cs:
if sample.getClientSampleID():
if not sample.getClientSampleID() in css:
css.append(sample.getClientSampleID())
else:
blanks_found = True
line_items = []
if ais:
ais.sort()
li = t(_('ARs: ${ars}', mapping={'ars': ', '.join(ais)}))
line_items.append(li)
if cos:
cos.sort()
li = t(_('Orders: ${orders}', mapping={'orders': ', '.join(cos)}))
line_items.append(li)
if crs:
crs.sort()
li = t(
_('Refs: ${references}',
mapping={'references': ', '.join(crs)}))
line_items.append(li)
if css:
css.sort()
li = t(
_('Samples: ${samples}', mapping={'samples': ', '.join(css)}))
line_items.append(li)
tot_line = ' '.join(line_items)
if tot_line:
subject = t(
_('Analysis results for ${subject_parts}',
mapping={'subject_parts': tot_line}))
if blanks_found:
subject += (' ' + t(_('and others')))
else:
subject = t(_('Analysis results'))
return subject, tot_line
def Import(context, request):
""" PANalytical - Omnia Axios_XRF analysis results
"""
infile = request.form['panalytical_omnia_axios_file']
fileformat = request.form['panalytical_omnia_axios_format']
artoapply = request.form['panalytical_omnia_axios_artoapply']
override = request.form['panalytical_omnia_axios_override']
sample = request.form.get('panalytical_omnia_axios_sample',
'requestid')
instrument = request.form.get('panalytical_omnia_axios_instrument', None)
errors = []
logs = []
warns = []
# Load the most suitable parser according to file extension/options/etc...
parser = None
if not hasattr(infile, 'filename'):
errors.append(_("No file selected"))
if fileformat == 'csv':
parser = AxiosXrfCSVParser(infile)
elif fileformat == 'csv_multi':
parser = AxiosXrfCSVMultiParser(infile)
else:
errors.append(t(_("Unrecognized file format ${file_format}",
mapping={"file_format": fileformat})))
if parser:
# Load the importer
status = ['sample_received', 'attachment_due', 'to_be_verified']
if artoapply == 'received':
status = ['sample_received']
elif artoapply == 'received_tobeverified':
status = ['sample_received', 'attachment_due', 'to_be_verified']
over = [False, False]
if override == 'nooverride':
over = [False, False]
elif override == 'override':
over = [True, False]
elif override == 'overrideempty':
over = [True, True]
sam = ['getRequestID', 'getSampleID', 'getClientSampleID']
if sample == 'requestid':
sam = ['getRequestID']
if sample == 'sampleid':
sam = ['getSampleID']
elif sample == 'clientsid':
sam = ['getClientSampleID']
elif sample == 'sample_clientsid':
sam = ['getSampleID', 'getClientSampleID']
importer = AxiosXrfImporter(parser=parser,
context=context,
idsearchcriteria=sam,
allowed_ar_states=status,
allowed_analysis_states=None,
override=over,
instrument_uid=instrument)
tbex = ''
try:
importer.process()
except:
tbex = traceback.format_exc()
errors = importer.errors
logs = importer.logs
warns = importer.warns
if tbex:
errors.append(tbex)
results = {'errors': errors, 'log': logs, 'warns': warns}
return json.dumps(results)
