def _validate_read_mi_file(path): """ Validate the `read_mi_file` function. See Also -------- read_mi_file : The validated function. magni.utils.validation.validate : Validation. """ _validate(path, path, {'type': str})
def _validate_remove_annotations(h5file): """ Validate the `remove_annotations` function. See Also -------- remove_annotations : The validated function. magni.utils.validation.validate : Validation. """ _validate(h5file, 'h5file', {'class': tables.file.File})
def _validate_split_path(path): """ Validate the `split_path` function. See Also -------- split_path : The validated function. magni.utils.validation.validate : Validation. """ _validate(path, "path", {"type": str})
def _validate_get(self, key): """ Validate the `get` function. See Also -------- Configger.get : The validated function. magni.utils.validation.validate : Validation. """ _validate(key, 'key', {'val_in': list(self._param.keys())}, True)
def _validate_annotate_database(h5file): """ Validate the `annotate_database` function. See Also -------- annotate_database : The validated function. magni.utils.validation.validate : Validation. """ _validate(h5file, 'h5file', {'class': tables.file.File})
def _validate_setup_matplotlib(settings): """ Validate the `setup_matplotlib` function. See Also -------- setup_matplotlib : The validated function. magni.util.validation.validate : Validation. """ _validate(settings, 'settings', [{'type': dict}, {'type': dict}])
def _validate_getitem(self, name): """ Validate the `__getitem__` function. See Also -------- _ColourCollection.__getitem__ : The validated function. magni.utils.validation.validate : Validation. """ _validate(name, 'name', {'val_in': list(self._brews.keys())})
def _validate_get_attr(self, key): """ Validate the `get_attr` function. See Also -------- Image.get_attr : The validated function. magni.utils.validation.validate : Validation. """ _validate(key, 'key', {'val_in': list(self._headers.keys())}, True)
def _validate_stretch_image(img, max_val): """ Validate the `stretch_image` function. See Also -------- stretch_image : The validated function. magni.utils.validation.validate : Validation. """ _validate_ndarray(img, 'img', {'subdtype': np.floating}) _validate(max_val, 'max_val', {'type_in': [int, float], 'min': 0})
def _validate_transform(x, m, n): """ Validatate a 2D transform. See also -------- magni.utils.validation.validate : Validation. """ _validate(m, 'm', {'type': int, 'min': 1}) _validate(n, 'n', {'type': int, 'min': 1}) _validate_ndarray(x, 'x', {'shape': (m * n, 1)})
def _validate_get_buffer(self, key): """ Validate the `get_buffer` function. See Also -------- Image.get_buffer : The validated function. magni.utils.validation.validate : Validation. """ keys = [buffer.get_attr('bufferLabel') for buffer in self._buffers] _validate(key, 'key', {'val_in': keys}, True)
def _validate_get_DFT(shape): """ Validate the `get_DFT` function. See Also -------- get_DFT : The validated function. magni.utils.validation.validate : Validation. """ _validate(shape, 'shape', [{'type_in': (list, tuple), 'len': 2}, {'type': int, 'min': 1}])
def _validate_load_phase_transition(path, label): """ Validate the `load_phase_transition` function. See Also -------- load_phase_transition : The validated function. magni.utils.validation.validate : Validation. """ _validate(path, 'path', {'type': str}) _validate(label, 'label', {'type': str})
def _validate_calculate_psnr(x_org, x_recons, peak): """ Validate the `calculate_psnr` function. See Also -------- magni.utils.validation.validate : Validation. """ _validate_ndarray(x_org, 'x_org', {}) _validate_ndarray(x_recons, 'x_recons', {'shape': x_org.shape}) _validate(peak, 'peak', {'type_in': [float, int], 'min': 0})
def _validate_init(self, data, hdrs): """ Validate the `__init__` function. See Also -------- Image.__init__ : The validated function. magni.utils.validation.validate : Validation. magni.utils.validation.validate_ndarray : Validation. """ _validate_ndarray(data, 'data') _validate(hdrs, 'hdrs', {'type_in': (list, tuple)})
def _validate_get_data(self, intensity_func, intensity_args): """ Validate the `get_data` function. See Also -------- Buffer.get_data : The validated function. fat.utils.validation.validate : Validation. """ _validate(intensity_func, 'intensity_func', {'type': types.FunctionType}, ignore_none=True) _validate(intensity_args, 'intensity_args', {'type_in': (list, tuple)})
def _validate_determine(algorithm, path, label, overwrite): """ Validate the `determine` function. See Also -------- determine : The validated function. magni.utils.validation.validate : Validation. """ _validate(algorithm, 'algorithm', {'type': types.FunctionType}) _validate(path, 'path', {'type': str}) _validate(label, 'label', {'type': str}) # regular expression matching invalid characters regexp = re.compile(r'[^a-zA-Z0-9 ,.\-_/]') if regexp.search(label): raise RuntimeError("label may not contain {!r}." .format(regexp.search(label).group())) # regular expression matching labels without empty path components regexp = re.compile(r'^([^/]+/)*[^/]+$') if not regexp.search(label): raise RuntimeError('label may not contain empty path components.') _validate(overwrite, 'overwrite', {'type': bool})
def _validate_init(self, brews): """ Validate the `__init__` function. See Also -------- _ColourCollection.__init__ : The validated function. magni.utils.validation.validate : Validation. """ _validate(brews, 'brews', [{'type': dict}, {'type_in': (list, tuple)}, {'type_in': (list, tuple), 'len': 3}, {'type': int, 'min': 0, 'max': 255}])
def _validate_construct_measurement_matrix(coords, h, w): """ Validate the `construct_measurement_matrix` function. See Also -------- construct_measurement_matrix : The validated function. magni.utils.validation.validate : Validation. magni.utils.validation.validate_ndarray : Validation. """ _validate_ndarray(coords, 'coords', {'shape': (coords.shape[0], 2)}) _validate(h, 'h', {'type': int, 'min': 1}) _validate(w, 'w', {'type': int, 'min': 1})
def _validate_vec2mat(x, mn_tuple): """ Validatate the `vec2mat` function. See also -------- magni.utils.validation.validate : Validation. """ m, n = mn_tuple _validate(m, 'm', {'type': int, 'min': 1}) _validate(n, 'n', {'type': int, 'min': 1}) _validate_ndarray(x, 'x', {'shape': (m * n, 1)})
def _validate_plot_phase_transition_colormap(dist, delta, rho, plot_l1, output_path): """ Validate the `plot_phase_transition_colormap` function. See Also -------- magni.utils.validation.validate : Validation. """ _validate_ndarray(delta, 'delta') _validate_ndarray(rho, 'rho', {'shape': (rho.shape[0],)}) _validate_ndarray(dist, 'dist', {'dim': 3, 'shape': ( delta.shape[0], rho.shape[0], dist.shape[2])}) _validate(plot_l1, 'plot_l1', {'type': bool}) _validate(output_path, 'output_path', {'type': str}, ignore_none=True)
def _validate_square_spiral_sample_surface(l, w, speed, sample_rate, time): """ Validate the `square_spiral_sample_surface` function. See Also -------- square_spiral_sample_surface : The validated function. magni.utils.validation.validate : Validation. """ _validate(l, 'l', {'type': float, 'min': _min_l}) _validate(w, 'w', {'type': float, 'min': _min_w}) _validate(speed, 'speed', {'type': float, 'min': _min_speed}) _validate(sample_rate, 'sample_rate', {'type': float, 'min': _min_sample_rate}) _validate(time, 'time', {'type': float, 'min': _min_time})
def _validate_init(self, param, requirements): """ Validate the `__init__` function. See Also -------- Configger.__init__ : The validated function. magni.utils.validation.validate : Validation. """ _validate(param, 'param', {'type': dict}) _validate(requirements, 'requirements', [{'type': dict}, {'type_in': [list, tuple, dict]}]) if not sorted(param.keys()) == sorted(requirements.keys()): raise KeyError('param and requirements must have the same keys.')
def _validate_init(self, matrices): """ Validate the `__init__` function. See Also -------- MatrixCollection.__init__ : The validated function. magni.utils.validation.validate : Validation. """ _validate(matrices, 'matrices', [{'type_in': (list, tuple)}, {'class': Matrix}]) for i in range(len(matrices) - 1): if matrices[0].shape[1] != matrices[1].shape[0]: raise ValueError('The matrices must have compatible shapes.')
def _validate_plot_pixel_mask(h, w, pixels, output_path): """ Validate the `plot_pixel_mask` function. See Also -------- plot_pixel_mask : The validated function. magni.utils.validation.validate : Validation. """ _validate(h, 'h', {'type': int, 'min': 2}) _validate(w, 'w', {'type': int, 'min': 2}) _validate_ndarray(pixels, 'pixels', {'subdtype': np.integer, 'dim': 2}) _validate(output_path, 'output_path', {'type': str}, ignore_none=True) if pixels.shape[1] != 2: raise TypeError('pixels.shape[1] must be 2.') if pixels.min() < 0: raise TypeError('All pixel coordinates must be non-negative.') if pixels[:, 0].max() > w - 1: raise TypeError('Pixel x-coordinates must not exceed pixel width.') if pixels[:, 1].max() > h - 1: raise TypeError('Pixel y-coordinates must not exceed pixel heigth.')
def _validate_spiral_sample_surface(l, w, speed, sample_rate, time): """ Validate the `spiral_sample_surface` function. See Also -------- spiral_sample_surface : The validated function. magni.utils.validation.validate : Validation. """ _validate(l, 'l', {'type': float, 'min': _min_l}) _validate(w, 'w', {'type': float, 'min': _min_w}) if l != w: raise ValueError('l must equal w for an archimedian sprial to make' + 'sense.') _validate(speed, 'speed', {'type': float, 'min': _min_speed}) _validate(sample_rate, 'sample_rate', {'type': float, 'min': _min_sample_rate}) _validate(time, 'time', {'type': float, 'min': _min_time})
def _validate_init(self, func, trans, args, shape): """ Validate the `__init__` function. See Also -------- Matrix.__init__ : The validated function. magni.utils.validation.validate : Validation. """ _validate(func, 'func', {'type': types.FunctionType}) _validate(trans, 'trans', {'type': types.FunctionType}) _validate(args, 'args', {'type_in': (list, tuple)}) _validate(shape, 'shape', [{'type_in': (list, tuple)}, {'type': int}])
def _validate_square_spiral_sample_image(h, w, scan_length, num_points): """ Validate the `square_spiral_sample_image` function. See Also -------- square_spiral_sample_image : The validated function. magni.utils.validation.validate : Validation. """ _validate(h, 'h', {'type': int, 'min': 2}) _validate(w, 'w', {'type': int, 'min': 2}) _validate(scan_length, 'scan_length', {'type': float, 'min': _min_scan_length}) _validate(num_points, 'num_points', {'type': int, 'min': _min_num_points})
def _validate_process(func, namespace, args_list, kwargs_list, maxtasks): """ Validation of the `process` function. See Also -------- process : The validated function. magni.utils.validation.validate : Validation. """ _validate(func, "func", [{"type": types.FunctionType}]) _validate(namespace, "namespace", [{"type": dict}]) requirement = {"type_in": [list, tuple]} _validate(args_list, "args_list", [requirement, requirement], True) _validate(kwargs_list, "kwargs_list", [requirement, {"type": dict}], True) if args_list is None and kwargs_list is None: raise ValueError("args_list and kwargs_list cannot both be None.") elif args_list is not None and kwargs_list is not None: if len(args_list) != len(kwargs_list): raise ValueError("len(args_list) must equal len(kwargs_list).") _validate(maxtasks, "maxtasks", {"type": int}, True)
def _validate_imshow(X, ax, intensity_func, intensity_args, show_axis): """ Validate the `imshow` function. See Also -------- imshow : The validated function. magni.utils.validation.validate : Validation. """ _validate_ndarray(X, 'X') _validate(ax, 'ax', {'class': mpl.axes.Axes}, ignore_none=True) _validate(intensity_func, 'intensity_func', {'type': types.FunctionType}, ignore_none=True) _validate(intensity_args, 'intensity_args', {'type_in': (list, tuple)}) _validate(show_axis, 'show_axis', {'type': str, 'val_in': ('none', 'top', 'inherit')})