def validateWorkspaces(self, valNames=None, mismatchName=None):
"""
Performs a check that two workspaces are equal using the CheckWorkspacesMatch
algorithm. Loads one workspace from a nexus file if appropriate.
Returns true if: the workspaces match
OR the validate method has not been overridden.
Returns false if the workspace do not match. The reason will be in the log.
"""
if valNames is None:
valNames = self.validate()
from mantid.simpleapi import SaveNexus, AlgorithmManager
checker = AlgorithmManager.create("CheckWorkspacesMatch")
checker.setLogging(True)
checker.setPropertyValue("Workspace1", valNames[0])
checker.setPropertyValue("Workspace2", valNames[1])
checker.setPropertyValue("Tolerance", str(self.tolerance))
if hasattr(self, "tolerance_is_reller") and self.tolerance_is_reller:
checker.setPropertyValue("ToleranceRelerr", "1")
for d in self.disableChecking:
checker.setPropertyValue("Check" + d, "0")
checker.execute()
if checker.getPropertyValue("Result") != "Success!":
print self.__class__.__name__
if mismatchName:
SaveNexus(InputWorkspace=valNames[0], Filename=self.__class__.__name__ + mismatchName + "-mismatch.nxs")
else:
SaveNexus(InputWorkspace=valNames[0], Filename=self.__class__.__name__ + "-mismatch.nxs")
return False
return True
def validateWorkspaces(self, valNames=None, mismatchName=None):
'''
Performs a check that two workspaces are equal using the CompareWorkspaces
algorithm. Loads one workspace from a nexus file if appropriate.
Returns true if: the workspaces match
OR the validate method has not been overridden.
Returns false if the workspace do not match. The reason will be in the log.
'''
if valNames is None:
valNames = self.validate()
checker = AlgorithmManager.create("CompareWorkspaces")
checker.setLogging(True)
checker.setPropertyValue("Workspace1", valNames[0])
checker.setPropertyValue("Workspace2", valNames[1])
checker.setProperty("Tolerance", float(self.tolerance))
if hasattr(self, 'tolerance_is_reller') and self.tolerance_is_reller:
checker.setProperty("ToleranceRelerr", True)
for d in self.disableChecking:
checker.setProperty("Check"+d, False)
checker.execute()
if not checker.getProperty("Result").value:
print(self.__class__.__name__)
if mismatchName:
SaveNexus(InputWorkspace=valNames[0],
Filename=self.__class__.__name__+mismatchName+'-mismatch.nxs')
else:
SaveNexus(InputWorkspace=valNames[0],
Filename=self.__class__.__name__+'-mismatch.nxs')
return False
return True
def test_incorrect_run_number(self):
alg = AlgorithmManager.create('LoadElementalAnalysisData')
alg.setChild(True)
alg.initialize()
alg.setProperty('Run', 1)
alg.setProperty('GroupWorkspace', '1')
errors = alg.validateInputs()
self.assertTrue("Run" in errors)
self.assertEquals(len(errors), 1)
self.assertFalse(AnalysisDataService.doesExist("1"))
def run_reduction(input_workspace: EventWorkspace, workspace_name: str,
settings_file: str, output_dir: str): # Run reduction
# Get the angle
angle = get_angle(input_workspace)
params = find_angle_parameters_from_settings_json(settings_file, angle)
alg = AlgorithmManager.create("ReflectometryISISLoadAndProcess")
properties = {
"InputRunList": workspace_name,
"FirstTransmissionRunList": params.first_transmission_run_list,
"SecondTransmissionRunList": params.second_transmission_run_list,
"ThetaIn": angle,
"DetectorCorrectionType": params.detector_correction_type,
"MonitorBackgroundWavelengthMin":
params.monitor_background_wavelength_min,
"MonitorBackgroundWavelengthMax":
params.monitor_background_wavelength_max,
"MonitorIntegrationWavelengthMin":
params.monitor_integration_wavelength_min,
"MonitorIntegrationWavelengthMax":
params.monitor_integration_wavelength_max,
"WavelengthMin": params.wavelength_min,
"WavelengthMax": params.wavelength_max,
"I0MonitorIndex": params.i_zero_monitor_index,
"AnalysisMode": params.analysis_mode,
"StartOverlap": params.start_overlap,
"EndOverlap": params.end_overlap,
"ScaleRHSWorkspace": params.scale_rhs_workspace,
"TransmissionProcessingInstructions":
params.transmission_processing_instructions,
"ProcessingInstructions": params.processing_instructions
}
alg.setProperties(properties)
alg.execute()
# Save reduced data as Nexus files
OutputWorkspace = alg.getPropertyValue("OutputWorkspace")
OutputWorkspaceBinned = alg.getPropertyValue("OutputWorkspaceBinned")
SaveNexus(OutputWorkspace,
os.path.join(output_dir, OutputWorkspace + ".nxs"))
SaveNexus(OutputWorkspaceBinned,
os.path.join(output_dir, OutputWorkspaceBinned + ".nxs"))
# Save a copy of the .json settings file
copy(settings_file, output_dir)
return OutputWorkspaceBinned
def checkWorkspacesMatch(self, ws1, ws2):
from mantid.simpleapi import SaveNexus, AlgorithmManager
checker = AlgorithmManager.create("CheckWorkspacesMatch")
checker.setLogging(True)
checker.setPropertyValue("Workspace1", ws1)
checker.setPropertyValue("Workspace2", ws2)
checker.setPropertyValue("Tolerance", str(self.tolerance))
checker.setPropertyValue("CheckInstrument","0")
checker.execute()
if checker.getPropertyValue("Result") != 'Success!':
print self.__class__.__name__
SaveNexus(InputWorkspace=ws2,Filename=self.__class__.__name__+'-mismatch.nxs')
return False
return True
def validate(self):
results = 'SCDR_output'
reference = 'SingleCrystalDiffuseReduction.nxs'
Load(Filename=reference,OutputWorkspace=reference)
checker = AlgorithmManager.create("CompareMDWorkspaces")
checker.setLogging(True)
checker.setPropertyValue("Workspace1",results)
checker.setPropertyValue("Workspace2",reference)
checker.setPropertyValue("Tolerance", "1e-7")
checker.execute()
if checker.getPropertyValue("Equals") != "1":
print(" Workspaces do not match, result: ",checker.getPropertyValue("Result"))
print(self.__class__.__name__)
SaveMD(InputWorkspace=results,Filename=self.__class__.__name__+'-mismatch.nxs')
return False
return True
def validate(self):
results = 'SCDR_output'
reference = 'SingleCrystalDiffuseReduction.nxs'
Load(Filename=reference,OutputWorkspace=reference)
checker = AlgorithmManager.create("CompareMDWorkspaces")
checker.setLogging(True)
checker.setPropertyValue("Workspace1",results)
checker.setPropertyValue("Workspace2",reference)
checker.setPropertyValue("Tolerance", "1e-7")
checker.execute()
if checker.getPropertyValue("Equals") != "1":
print(" Workspaces do not match, result: ",checker.getPropertyValue("Result"))
print(self.__class__.__name__)
SaveMD(InputWorkspace=results,Filename=self.__class__.__name__+'-mismatch.nxs')
return False
return True
def validate(self):
results = 'CMRSCMD_output_HKL'
reference = 'ConvertMultipleRunsToSingleCrystalMD_HKL.nxs'
Load(Filename=reference,OutputWorkspace=reference)
checker = AlgorithmManager.create("CompareMDWorkspaces")
checker.setLogging(True)
checker.setPropertyValue("Workspace1",results)
checker.setPropertyValue("Workspace2",reference)
checker.setPropertyValue("Tolerance", "1e-5")
checker.setPropertyValue("IgnoreBoxID", "1")
checker.execute()
if checker.getPropertyValue("Equals") != "1":
print(" Workspaces do not match, result: ",checker.getPropertyValue("Result"))
print(self.__class__.__name__)
SaveMD(InputWorkspace=results,Filename=self.__class__.__name__+'-mismatch.nxs')
return False
return True
def validate(self):
results = 'CMRSCMD_output_HKL'
reference = 'ConvertMultipleRunsToSingleCrystalMD_HKL.nxs'
Load(Filename=reference,OutputWorkspace=reference)
checker = AlgorithmManager.create("CompareMDWorkspaces")
checker.setLogging(True)
checker.setPropertyValue("Workspace1",results)
checker.setPropertyValue("Workspace2",reference)
checker.setPropertyValue("Tolerance", "1e-5")
checker.setPropertyValue("IgnoreBoxID", "1")
checker.execute()
if checker.getPropertyValue("Equals") != "1":
print(" Workspaces do not match, result: ",checker.getPropertyValue("Result"))
print(self.__class__.__name__)
SaveMD(InputWorkspace=results,Filename=self.__class__.__name__+'-mismatch.nxs')
return False
return True
