def perfromTsneOnNCl(n_clusters): surf_codebook.main(n_clusters) #PERFORM TSNE surf_tsne, s_ids = tsne.TSNE_Surf("surf_n"+str(n_clusters)) #PLOT #surf_tsne, s_ids = tsneHandler.getTSNEwithIds("surf_n"+str(n_clusters)) plot_visualisation.plot_raw_TSNE(surf_tsne,s_ids,"surf"+str(n_clusters)+'_tsne')
def main(): filenm = "surf3" # tsne_x,X_Ids = TSNE_Surf(filenm) Tsne, ids = tsneHandler.getTSNEwithIds(filenm) img = plot_visualisation.plot_raw_TSNE(Tsne, ids, filenm) # img = cv2.imread(dirm.outputDirectory+"surf3.jpg") plot_visualisation.displayInteractiveImage(img, "surf3")
def main(): filenm = "surf3" #tsne_x,X_Ids = TSNE_Surf(filenm) Tsne, ids = tsneHandler.getTSNEwithIds(filenm) img = plot_visualisation.plot_raw_TSNE(Tsne, ids, filenm) #img = cv2.imread(dirm.outputDirectory+"surf3.jpg") plot_visualisation.displayInteractiveImage(img, "surf3")
def run(): #EXTRACT ALL OUR FEATURES AND STORE THEM IN THE SQL DATABASE imagesHandler.main() colourHandler.main("RGB") colourHandler.main("LAB") hogHandler.main() surf_start = timeit.default_timer() surf_codebook.run_codebook(n_clusters,hessian_threshold, resize_ratio, resize_method, crop_amount) surfRunTime = timeit.default_timer() - surf_start sift_start = timeit.default_timer() sift_codebook.run_codebook(n_clusters, resize_ratio, resize_method, crop_amount) siftRunTime = timeit.default_timer() - sift_start orb_start = timeit.default_timer() orb_codebook.run_codebook(n_clusters, resize_ratio, resize_method, crop_amount) orbRunTime = timeit.default_timer() - orb_start print "SurfRunttime:",surfRunTime,"siftRuntime:",siftRunTime,"orbRt",orbRunTime # PERFORM TSNE tsneHandler.drop_database_table() tsneHandler.create_database_table() RGB_col_tsne,R_c_ids = tsne.TSNE_General(colourHandler.RGB_table_name) LAB_col_tsne,L_c_ids = tsne.TSNE_General(colourHandler.LAB_table_name) hog_tsne, h_ids = tsne.TSNE_General(hogHandler.table_name) gist_tsne,g_ids = tsne.TSNE_Gist("gist_tsne", "gistvals") surf_tsne, su_ids = tsne.TSNE_Surf("surf_ht"+str(hessian_threshold)+"_rz"+str(resize_ratio)+"_cr"+str(crop_amount) +"_n"+str(n_clusters)) orb_tsne, o_ids = tsne.TSNE_orb("orb_rz"+str(resize_ratio)+"_cr"+str(crop_amount) +"_n"+str(n_clusters)) sift_tsne, si_ids = tsne.TSNE_sift("sift_rz"+str(resize_ratio)+"_cr"+str(crop_amount) +"_n"+str(n_clusters)) # get from sql #col_tsne, c_ids = tsneHandler.getTSNEwithIds(colourHandler.table_name) #hog_tsne, h_ids = tsneHandler.getTSNEwithIds(hogHandler.table_name) #surf_tsne, s_ids = tsneHandler.getTSNEwithIds("surf_n"+str(n_clusters)) #Plot plot_visualisation.plot_raw_TSNE(RGB_col_tsne,R_c_ids,colourHandler.RGB_table_name) plot_visualisation.plot_raw_TSNE(LAB_col_tsne, L_c_ids, colourHandler.LAB_table_name) plot_visualisation.plot_raw_TSNE(hog_tsne,h_ids,hogHandler.table_name) plot_visualisation.plot_raw_TSNE(gist_tsne, g_ids, "gist") plot_visualisation.plot_raw_TSNE(surf_tsne,su_ids,"surf_ht"+str(hessian_threshold)+"_rz"+str(resize_ratio)+"_cr"+str(crop_amount) +"_n"+str(n_clusters) + '_tsne') plot_visualisation.plot_raw_TSNE(orb_tsne,o_ids,"orb_rz"+str(resize_ratio)+"_cr"+str(crop_amount) +"_n"+str(n_clusters) + '_tsne') plot_visualisation.plot_raw_TSNE(sift_tsne,si_ids,"sift_rz"+str(resize_ratio)+"_cr"+str(crop_amount) +"_n"+str(n_clusters) + '_tsne') #Export tsne results to csv to be processed by gephi ect tsneHandler.exportTsneWithFile(colourHandler.RGB_table_name) tsneHandler.exportTsneWithFile(colourHandler.LAB_table_name) tsneHandler.exportTsneWithFile(hogHandler.table_name) tsneHandler.exportTsneWithFile("gist_tsne") tsneHandler.exportTsneWithFile("surf_ht"+str(hessian_threshold)+"_rz"+str(resize_ratio)+"_cr"+str(crop_amount) +"_n"+str(n_clusters)) tsneHandler.exportTsneWithFile("orb_rz"+str(resize_ratio)+"_cr"+str(crop_amount) +"_n"+str(n_clusters)) tsneHandler.exportTsneWithFile("sift_rz"+str(resize_ratio)+"_cr"+str(crop_amount) +"_n"+str(n_clusters))