class Qualify(object):
def __init__(self):
print '<===INIT QUALIFY===>'
self.marker = Marker()
self.gate = Gate()
def run(self):
self.marker.run()
self.gate.run()
def main():
(rand_proc, tree_height) = parse_args()
if isinstance(rand_proc, R3):
marker = MarkerR3(tree_height)
else:
marker = Marker(tree_height)
marker.run(rand_proc)
print(marker.status())
return 0
def main():
image_fn = '/home/joni/smallbrains-nas1/array1/pseudopupil_joni/Spectrometer/DPP_cal_1_ty2/snap_2020-02-21_14.15.08.088000_0.tiff'
fig, ax = plt.subplots()
marker = Marker(fig, ax, [image_fn], None)
pinhole = marker.run()
crop = pinhole[image_fn])
pinhole_image = image_fn
coodinates = get_xy_coordinates(image_fn)