def test_all(self):
parsers.parser_for_contact_map()
parsers.parser_for_frag_overview()
parsers.parser_for_BW_overview()
parsers.parser_for_densities()
parsers.parser_for_CGN_overview()
parsers.parser_for_rn()
parsers.parser_for_interface()
parsers.parser_for_dih()
parsers.parser_for_sites()
parsers.parser_for_compare_neighborhoods()
parsers.parser_for_examples()
parsers.parser_for_residues()
#!/usr/bin/env python3 ############################################################################## # This file is part of mdciao. # # Copyright 2020 Charité Universitätsmedizin Berlin and the Authors # # Authors: Guillermo Pérez-Hernandez # Contributors: # # mdciao is free software: you can redistribute it and/or modify # it under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # mdciao is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU Lesser General Public License for more details. # # You should have received a copy of the GNU Lesser General Public License # along with mdciao. If not, see <https://www.gnu.org/licenses/>. ############################################################################## from mdciao.parsers import parser_for_BW_overview from mdciao.cli.cli import _fragment_overview parser = parser_for_BW_overview() a = parser.parse_args() _fragment_overview(a,"BW")
def test_BW_url(self):
a = parser_for_BW_overview()
a = a.parse_args(["adrb2_human"])
a.__setattr__("topology",test_filenames.pdb_3SN6)
cli._fragment_overview(a, "BW")
def test_no_top(self):
a = parser_for_BW_overview()
a = a.parse_args([test_filenames.adrb2_human_xlsx])
a.__setattr__("labels","3.50")
cli._fragment_overview(a, "BW")
def test_BW_paths_and_verbose(self):
a = parser_for_BW_overview()
a = a.parse_args([test_filenames.adrb2_human_xlsx])
a.__setattr__("print_conlab",True)
a.__setattr__("topology",test_filenames.top_pdb)
cli._fragment_overview(a, "BW")