def run_main_job():
startTime = datetime.datetime.utcnow()
print ("Anibit website timer, (c) 2014-2015 Anibit Technology");
print ("Reading config...")
with open("capture_metrics.config.json") as f:
minified = minify_json.json_minify(f.read())
config = json.loads(minified)
#check to see if there is a valid database already
dbConnection = setup_database(config['db_name'], config['enable_db_reset'])
jobRunID = db_log_job_runs(dbConnection)
#get list of URL's
for urlJob in config['url_jobs']:
run_job(dbConnection, config, urlJob['url'], urlJob['nickname'], jobRunID)
endTime = datetime.datetime.utcnow()
delta = endTime - startTime
db_log_main_run_time(dbConnection, jobRunID, delta.total_seconds())
print ("complete.")
def run(self):
pluginspath = sublime.packages_path()
allkeybindings = []
for root, dirs, files in os.walk(pluginspath):
for fpath in (
os.path.join(root, f)
for f in files
if f.lower() in ("default (%s).sublime-keymap" % (sublime.platform(),), "default.sublime-keymap")
):
with open(fpath) as f:
content = f.read()
keybindings = json.loads(minify_json.json_minify(content))
for e in keybindings:
# add package name
e["package"] = os.path.split(os.path.split(fpath)[0])[1]
# order context list to be able to compare it
if "context" in e:
e["context"].sort()
else:
e["context"] = None
# normalize command string
for i, command in enumerate(e["keys"]):
cmod, ckey = [], []
comp = command.split("+")
for c in comp:
if c in MODIFIERS:
cmod.append(c)
else:
ckey.append(c)
cmod.sort()
e["keys"][i] = "+".join(cmod + ckey)
allkeybindings.extend(keybindings)
sublime.set_timeout(functools.partial(self.on_done, allkeybindings), 0)
def load_json(self, path): """Loads JSON. Unused and will be removed. Use common.tools.load_json instead """ import json from minify_json import json_minify with open(path) as stream: return json.loads(json_minify(stream.read(), False))
def load_json(self, path): """Loads JSON. Unused and will be removed. Use common.tools.load_json instead """ import json from minify_json import json_minify with open(path) as stream: return json.loads(json_minify(stream.read(), False))
def run_server():
global config
print ("Anibit website timer results server, (c) 2014-2015 Anibit Technology");
print ("Reading config...")
with open("timing_results.config.json") as f:
minified = minify_json.json_minify(f.read())
config = json.loads(minified)
print ("starting server...")
run(host=config['server_host'], port = config['server_port'], debug=True)
def parse_json_with_comments(path):
"""
Stript comment and parse json
Based on solution from Damien Riquet:
http://www.lifl.fr/~riquetd/parse-a-json-file-with-comments.html
"""
with open(path, 'r') as file:
content = file.read().decode('utf-8')
content = minify_json.json_minify(content)
return json.loads(content)
def check_for_conflicts(self, package):
orig_path = os.path.join(PACKAGES_PATH, package)
self.done = False
for filename in os.listdir(orig_path):
if filename.lower() == "default.sublime-keymap" or \
filename.lower() == "default (%s).sublime-keymap" % (PLATFORM.lower()):
path = os.path.join(orig_path, filename)
content = open(path).read()
try:
minified_content = json_minify(content)
if self.debug:
self.debug_minified[package] = minified_content
key_map = json.loads(minified_content)
except:
if not self.prev_error:
self.prev_error = True
sublime.error_message("Could not parse a keymap file. See console for details")
error_path = os.path.join(os.path.basename(orig_path), filename)
print "FindKeyConflicts[Warning]: An error " + \
"occured while parsing '" + error_path + "'"
continue
for entry in key_map:
keys = entry["keys"]
if "context" in entry:
entry["context"].sort()
key_array = []
key_string = ""
for key in keys:
key_array.append(self.order_key_string(key))
if self.check_ignore(key_array):
continue
key_string = ",".join(key_array)
if key_string in self.all_key_map:
tmp = self.all_key_map.get(key_string)
if package not in tmp["packages"]:
tmp["packages"].append(package)
tmp[package] = [entry]
else:
tmp[package].append(entry)
self.all_key_map[key_string] = tmp
else:
new_entry = {}
new_entry["packages"] = [package]
new_entry[package] = [entry]
self.all_key_map[key_string] = new_entry
self.done = True
def find_jshintrc(start_dir):
"""
Locates the most relevant .jshintrc file. Of the following
locations, the first to be found will be used:
1. The file referenced by a jsonHintConfig value in a
package.json file. The package.json file is found in the
start_dir or any of its parents.
2. A .jshintrc file in the start_dir or any of its parents.
3. ~/.jshintrc
start_dir is normally set to the directory of the file being
validated.
When start_dir is not provided (which happens with files that
are not saved yet), the first two locations will not be
available, so ~/.jshintrc is the only candidate that is
considered.
If no relevant .jshintrc is found, the return value is None.
"""
if start_dir:
# locate the nearest package.json
pj = find_up_the_tree(start_dir, "package.json")
if pj:
# does it have a jsonHintConfig setting?
try:
pkg = json.loads(json_minify(open(pj, "r").read()))
if "jsonHintConfig" in pkg:
# does it point to a file that exists?
pj_dir = os.path.dirname(pj)
full_path = os.path.join(pj_dir, pkg["jsonHintConfig"])
full_path = os.path.abspath(full_path)
if os.path.isfile(full_path):
# success
return full_path
except ValueError:
# package.json file is invalid JSON! Skip it.
pass
# locate the nearest .jshintrc
jshrc = find_up_the_tree(start_dir, ".jshintrc")
if jshrc:
return jshrc
# last ditch: look for .jshintrc in the user’s home directory
home_jshrc = os.path.expanduser("~/.jshintrc")
if os.path.isfile(home_jshrc):
return home_jshrc
return None
def find_jshintrc(start_dir):
"""
Locates the most relevant .jshintrc file. Of the following
locations, the first to be found will be used:
1. The file referenced by a jsonHintConfig value in a
package.json file. The package.json file is found in the
start_dir or any of its parents.
2. A .jshintrc file in the start_dir or any of its parents.
3. ~/.jshintrc
start_dir is normally set to the directory of the file being
validated.
When start_dir is not provided (which happens with files that
are not saved yet), the first two locations will not be
available, so ~/.jshintrc is the only candidate that is
considered.
If no relevant .jshintrc is found, the return value is None.
"""
if start_dir:
# locate the nearest package.json
pj = find_up_the_tree(start_dir, 'package.json')
if pj:
# does it have a jsonHintConfig setting?
try:
pkg = json.loads(json_minify(open(pj, 'r').read()))
if 'jsonHintConfig' in pkg:
# does it point to a file that exists?
pj_dir = os.path.dirname(pj)
full_path = os.path.join(pj_dir, pkg['jsonHintConfig'])
full_path = os.path.abspath(full_path)
if os.path.isfile(full_path):
# success
return full_path
except ValueError:
# package.json file is invalid JSON! Skip it.
pass
# locate the nearest .jshintrc
jshrc = find_up_the_tree(start_dir, '.jshintrc')
if jshrc:
return jshrc
# last ditch: look for .jshintrc in the user’s home directory
home_jshrc = os.path.expanduser('~/.jshintrc')
if os.path.isfile(home_jshrc):
return home_jshrc
return None
def token_gen(pub, priv):
if priv == None:
priv = ''
if len(priv) > 0:
pub['o'] = len(priv)
else:
try:
del pub['o']
except:
pass
jss = minify_json.json_minify(json.dumps(pub))
td = jss[1:-1]
sig = sign.sign(td + priv)
tok = "%s%s%s%s" %(len(td), td, priv, sig)
return tok.encode('base64').replace('\n', '').replace('=', '')
def token_gen(pub, priv):
if priv == None:
priv = ''
if len(priv) > 0:
pub['o'] = len(priv)
else:
try:
del pub['o']
except:
pass
jss = minify_json.json_minify(json.dumps(pub))
td = jss[1:-1]
sig = sign.sign(td + priv)
tok = "%s%s%s%s" % (len(td), td, priv, sig)
return tok.encode('base64').replace('\n', '').replace('=', '')
def main():
parser = argparse.ArgumentParser(description='File Manipulation')
parser.add_argument( '-c', '--conf'
,default=__CONFFILE
,help='default config file is params.conf.json'
)
parser.add_argument( '-d', '--directory'
,default=None
,help='The Absolute path of the pictures we are dealing with'
)
args=parser.parse_args()
rootdir = args.directory
CONFFILE = args.conf
# Loading config file
json_data = open( CONFFILE )
data = json.loads( json_minify( json_data.read()))
json_data.close()
conf = data["config"]
# Overriding rootdir by command line if set
if rootdir:
conf["rootDir"] = rootdir
## Logger configuration.
try:
logging.config.dictConfig(data["loggerConf"])
except ValueError:
print >> sys.stderr, "logger configuration not excepted"
print >> sys.stderr, data["loggerConf"]
sys.exit()
logger = logging.getLogger(LOGNAME)
logger.info( "Config file used: %s" % ( CONFFILE ))
logger.info( "Rootdir used: %s" % ( conf["rootDir"] ))
fm = fileManipulation( conf, LOGNAME )
fm.files()
logger.info( "Finished..." )
def manage_package(self, package):
orig_path = os.path.join(PACKAGES_PATH, package)
self.done = False
for filename in os.listdir(orig_path):
if filename.lower() == "default.sublime-keymap" or \
filename.lower() == "default (%s).sublime-keymap" % (PLATFORM.lower()):
path = os.path.join(orig_path, filename)
content = open(path).read()
try:
minified_content = json_minify(content)
if self.debug:
self.debug_minified[package] = minified_content
key_map = json.loads(minified_content)
except:
if not self.prev_error:
self.prev_error = True
sublime.error_message("Could not parse a keymap file. See console for details")
error_path = os.path.join(os.path.basename(orig_path), filename)
logger.warning("FindKeyConflicts[Warning]: An error " + "occured while parsing '" + error_path + "'")
continue
self.handle_key_map(package, key_map)
self.done = True
def getRampsFromFile(fname):
"""
Read extra color ramps into our global RAMPS dictionary
from specified file
"""
from minify_json import json_minify
# Read palette file
palettesFobj = open(fname, "r")
# Minify file contents
palsMinified = json_minify(palettesFobj.read())
# Loads palettes in a dict
pals = json.loads(palsMinified)
# For each palette that's been detected
for pal in pals:
# Check name is present and unique
if "name" in pal:
cur_name = pal["name"]
else:
# Quit - invalid colour scheme structure
msg = 'Invalid colour ramp structure'
raise viewererrors.ColorRampException(msg)
if cur_name in RAMP.keys():
# Quit - invalid colour scheme name
msg = 'Duplicated colour ramp name'
raise viewererrors.ColorRampException(msg)
# Check red, green and blue fields are present
if "description" in pal:
# Parsing description of the colour ramp
descriptionKeys = pal["description"].keys()
# Is it RGB coded?
isRgb = set(descriptionKeys).issubset(set(['red', 'green',
'blue']))
# Is it hex coded?
isHex = descriptionKeys == ['hex']
# If RGB is given it has priority
if isRgb:
reds = pal["description"]["red"]
greens = pal["description"]["green"]
blues = pal["description"]["blue"]
else:
# Else look for HEX
if isHex:
# Convert HEX to RGB
colrgb = numpy.array([
HEXtoRGB(col)
for col in pal["description"]["hex"].split()
])
# Add RGB values to palette decription
reds = " ".join(map(str, colrgb[:, 0]))
greens = " ".join(map(str, colrgb[:, 1]))
blues = " ".join(map(str, colrgb[:, 2]))
else:
# Quit - invalid colour scheme
msg = 'Invalid colour ramp structure'
raise viewererrors.ColorRampException(msg)
else:
# Quit - invalid colour scheme
msg = 'Invalid colour ramp structure'
raise viewererrors.ColorRampException(msg)
# Other fields optional
# not sure what we'll be doing with this yet
if "author" in pal:
cur_author = pal["author"]
else:
cur_author = ''
if "comments" in pal:
cur_comments = pal["comments"]
else:
cur_comments = ''
if "type" in pal:
cur_type = pal["type"]
else:
cur_type = ''
# Assembling dictionary entry
RAMP[cur_name] = {
'author': cur_author,
'comments': cur_comments,
'type': cur_type,
'description': {}
}
# Add decsription fields
RAMP[cur_name]["description"]["red"] = reds
RAMP[cur_name]["description"]["green"] = greens
RAMP[cur_name]["description"]["blue"] = blues
def invoke_service(self, module, *pargs, **kwargs):
# TODO(choudhury): This method should attempt to load the named module,
# then invoke it with the given arguments. However, if the named module
# is "config" or something similar, the method should instead launch a
# special "config" app, which lists the available app modules, along
# with docstrings or similar. It should also allow the user to
# add/delete search paths for other modules.
tangelo.content_type("text/plain")
# Save the system path (be sure to *make a copy* using the list()
# function) - it will be modified before invoking the service, and must
# be restored afterwards.
origpath = list(sys.path)
# By default, the result should be a bare response that we will place an
# error message in if something goes wrong; if nothing goes wrong this
# will be replaced with some other object.
result = tangelo.empty_response()
# Store the modpath in the thread-local storage (tangelo.paths() makes
# use of this per-thread data, so this is the way to get the data across
# the "module boundary" properly).
modpath = os.path.dirname(module)
cherrypy.thread_data.modulepath = modpath
cherrypy.thread_data.modulename = module
# Extend the system path with the module's home path.
sys.path.insert(0, modpath)
# Import the module if not already imported previously (or if the module
# to import, or its configuration file, has been updated since the last
# import).
try:
stamp = self.modules.get(module)
mtime = os.path.getmtime(module)
config_file = module[:-2] + "json"
config_mtime = None
if os.path.exists(config_file):
config_mtime = os.path.getmtime(config_file)
if stamp is None or mtime > stamp["mtime"] or (config_mtime is not None and config_mtime > stamp["mtime"]):
if stamp is None:
tangelo.log("loading new module: " + module)
else:
tangelo.log("reloading module: " + module)
# Load any configuration the module might carry with it.
if config_mtime is not None:
try:
with open(config_file) as f:
config = json.loads(json_minify(f.read()))
if type(config) != dict:
msg = "Service module configuration file does not contain a key-value store (i.e., a JSON Object)"
tangelo.log(msg)
raise TypeError(msg)
except IOError:
tangelo.log("Could not open config file %s" % (config_file))
raise
except ValueError as e:
tangelo.log("Error reading config file %s: %s" % (config_file, e))
raise
else:
config = {}
cherrypy.config["module-config"][module] = config
# Remove .py to get the module name
name = module[:-3]
# Load the module.
service = imp.load_source(name, module)
self.modules[module] = { "module": service,
"mtime": max(mtime, config_mtime) }
else:
service = stamp["module"]
except:
bt = traceback.format_exc()
tangelo.log("Error importing module %s" % (tangelo.request_path()), "SERVICE")
tangelo.log(bt, "SERVICE")
result = tangelo.HTTPStatusCode("501 Error in Python Service", "There was an error while trying to import module %s:<br><pre>%s</pre>" % (tangelo.request_path(), bt))
else:
# Try to run the service - either it's in a function called "run()",
# or else it's in a REST API consisting of at least one of "get()",
# "put()", "post()", or "delete()".
#
# Collect the result in a variable - depending on its type, it will be
# transformed in some way below (by default, to JSON, but may also raise
# a cherrypy exception, log itself in a streaming table, etc.).
#
try:
if 'run' in dir(service):
# Call the module's run() method, passing it the positional and
# keyword args that came into this method.
result = service.run(*pargs, **kwargs)
else:
# Reaching here means it's a REST API. Check for the
# requested method, ensure that it was marked as being part
# of the API, and call it; or give a 405 error.
method = cherrypy.request.method
restfunc = service.__dict__[method.lower()]
if restfunc is not None and hasattr(restfunc, "restful") and restfunc.restful:
result = restfunc(*pargs, **kwargs)
else:
result = tangelo.HTTPStatusCode(405, "Method not allowed")
except Exception as e:
bt = traceback.format_exc()
tangelo.log("Caught exception while executing service %s" % (tangelo.request_path()), "SERVICE")
tangelo.log(bt, "SERVICE")
result = tangelo.HTTPStatusCode("501 Error in Python Service", "There was an error executing service %s:<br><pre>%s</pre>" % (tangelo.request_path(), bt))
# Restore the path to what it was originally.
sys.path = origpath
# Check the type of the result to decide what result to finally return:
#
# 1. If it is an HTTPStatusCode object, raise a cherrypy HTTPError
# exception, which will cause the browser to do the right thing.
#
# 2. TODO: If it's a Python generator object, log it with the Tangelo
# streaming API.
#
# 3. If it's a Python dictionary, convert it to JSON.
#
# 4. If it's a string, don't do anything to it.
#
# This allows the services to return a Python object if they wish, or to
# perform custom serialization (such as for MongoDB results, etc.).
if isinstance(result, tangelo.HTTPStatusCode):
if result.msg:
raise cherrypy.HTTPError(result.code, result.msg)
else:
raise cherrypy.HTTPError(result.code)
elif "next" in dir(result):
# Generate a key corresponding to this object, using 100 random
# bytes from the system - ensure the random key is not already in
# the table (even though it would be crazy to wind up with a
# collision).
#
# TODO(choudhury): replace this with a call to generate_key().
# Move the comment above into the generate_key() function.
key = md5.md5(os.urandom(100)).hexdigest()
while key in self.streams:
key = md5.md5(os.urandom(100)).hexdigest()
# Log the object in the streaming table.
self.streams[key] = result
# Create an object describing the logging of the generator object.
result = tangelo.empty_response()
result["stream_key"] = key
# Serialize it to JSON.
result = json.dumps(result)
elif not isinstance(result, types.StringTypes):
try:
result = json.dumps(result)
except TypeError as e:
t = e.message.split("<service.")[1].split()[0]
msg = "Service %s returned an object of type %s that could not be serialized to JSON" % (tangelo.request_path(), t)
tangelo.log("Error: %s" % (msg), "SERVICE")
raise cherrypy.HTTPError("501 Error in Python Service", msg)
return result
import argparse
import json
import minify_json
# dodaj folder krak do pythonpath
sys.path.append(os.path.abspath("krak"))
import simulator
from robot_controller import compile_robot
parser = argparse.ArgumentParser()
parser.add_argument("test_file", help="path to a file with tests specification")
parser.add_argument("robot_file", help="path to a RobotController file")
#parser.add_argument("--maps_base_path", help="path to a RobotController file") TODO
args = parser.parse_args()
tests_file = open(args.test_file)
minified = minify_json.json_minify(tests_file.read())
robot_class = compile_robot(args.robot_file)[0]
tests = json.loads(minified);
# todo: run tests in parallel - or not - it's bad for debugging
test_id = 0
num_tests = len(tests)
failed_tests = []
results = []
for test in tests:
test_id += 1
print "--+Running test ({},{}) of {}:".format(test_id, test["map"], num_tests)
test["map"] = str(test["map"]) # because of stupid check in simulator
sim = simulator.KrakrobotSimulator(robot_controller_class=robot_class, simulation_dt=0.0, visualisation=False, iteration_write_frequency=1000000, **test)
result = sim.run();
# z position comes from p1 and assumes face of PMT level with top of UI - may need adjustment in future !!!! FIXME !!!!
# Check units - have increase by order of mag as think in cm not mm (need to be given in mm in detector units)
if (num_ == 0):
pos_dir_ = numpy.array([131., 524., 14340.1, 0, 0, 1])
elif (num_ == 1):
pos_dir_ = numpy.array([-364., 32., 14340.1, 0, 0, 1])
elif (num_ == 2):
pos_dir_ = numpy.array([356., 0., 14340.1, 0, 0, 1])
elif (num_ == 3):
pos_dir_ = numpy.array([298., -396., 14340.1, 0, 0, 1])
# Only expect 4 neck tubes
return pos_dir_
with open(args[1], "r") as panel_info_file:
panel_data = yaml.load(json_minify(panel_info_file.read(), False))
f = open(args[0], "rU")
noel_file = csv.reader(f)
# Add dictionary that will map PMT location to a list of PMTs at that location
mapping = {}
# Make the map first
noel_file.next() # Ignore the first line
for pmt in noel_file:
# location is pmt[13]
if pmt[13] not in mapping:
mapping[pmt[13]] = []
# Add whatever descriptor here that tells you e.g. LCN and pmt type
# Here I've added a tuple with ccc and pmt type
mapping[pmt[13]].append(
(pmt[0], pmt[1], pmt[2], noel_type_to_rat_type(pmt[9])))
def validate(quiet=False):
# locate the .jshintrc to use
jshintrc = find_jshintrc(os.environ.get('TM_DIRECTORY', None))
jshintrc_valid = False
if jshintrc:
try:
json.loads(json_minify(open(jshintrc, 'r').read()))
jshintrc_valid = True
except ValueError:
jshintrc_valid = False
# path to our custom jshint reporter
reporter_path = os.path.join(os.path.abspath(os.path.dirname(__file__)),
'reporter.js')
# build jshint args
args = [
os.environ.get('TM_JSHINT_EXTERNAL_JSHINT', 'jshint'),
'--reporter="' + reporter_path + '"'
]
if jshintrc and jshintrc_valid:
args.append('--config="%s"' % jshintrc)
args.append('-')
# Build env for our command: JSHint (and Node) are often
# installed to /usr/local/bin, which may not be on the
# bundle’s PATH in a default install of TextMate.
env = os.environ.copy()
path_parts = env['PATH'].split(':')
if '/bin' not in path_parts:
path_parts.append('/bin')
if '/usr/bin' not in path_parts:
path_parts.append('/usr/bin')
if '/usr/local/bin' not in path_parts:
path_parts.append('/usr/local/bin')
env['PATH'] = ':'.join(path_parts)
try:
jshint = subprocess.Popen(args,
stdin=subprocess.PIPE,
stdout=subprocess.PIPE,
env=env)
except OSError as e:
msg = [
'Hi there. This is the “JavaScript JSHint (External)” bundle for '
+ 'TextMate. I validate your code using JSHint.', '',
'I had the following problem running <code>jshint</code>:', '',
'<code>%s</code>' % e, '', '<h4>How to fix it</h4>',
'Make sure the <code>jshint</code> and <code>node</code> ' +
'commands are on the <code>PATH</code>.', '',
'<ol>' + '<li>Go to <i>TextMate</i> > <i>Preferences…</i> > ' +
'<i>Variables</i></li>' +
'<li>Ensure the <code>PATH</code> is enabled there and that ' +
'it includes the location of your <code>jshint</code> ' +
'and <code>node</code> commands.</li>'
'</ol>', 'The path currently used by TextMate bundles is:', '',
'<div style="overflow:auto"><code>%s</code></div>' % env['PATH'],
'<h4>How to disable validation</h4>',
'If you mistakenly installed this validation tool and want to ' +
'disable it, you can do so in TextMate:', '',
'<ol>' + '<li>On the TextMate menu, choose ' +
'<i>Bundles</i> > <i>Edit Bundles…</i></li>' +
'<li>Locate “JavaScript JSHint (External)”</li>' +
'<li>Uncheck “Enable this item”</li>' +
'<li>Close the Bundle Editor and choose “Save”</li>' + '</ol>'
]
show_error_message('<br>'.join(msg))
sys.exit()
# Pipe stdin to the subprocess; if we are validating an HTML
# file with embedded JavaScript, only pipe content within the
# <script>…</script> tags to the subprocess.
if os.environ['TM_SCOPE'].startswith('source.js'):
for line in sys.stdin:
jshint.stdin.write(line)
else:
start_tag = re.compile('(\<\s*script)[\s\>]', re.IGNORECASE)
end_tag = re.compile('\<\/\s*script[\s\>]', re.IGNORECASE)
state = 'IGNORE'
for line in sys.stdin:
while line:
if state == 'IGNORE':
match = start_tag.search(line)
if match:
# found a script tag
line = ' ' * match.end(1) + line[match.end(1):]
state = 'LOOK_FOR_END_OF_OPENING_TAG'
else:
jshint.stdin.write('\n')
line = None
elif state == 'LOOK_FOR_END_OF_OPENING_TAG':
gt_pos = line.find('>')
if gt_pos != -1:
line = ' ' * (gt_pos + 1) + line[gt_pos + 1:]
state = 'PIPE_TO_OUTPUT'
else:
jshint.stdin.write('\n')
line = None
elif state == 'PIPE_TO_OUTPUT':
match = end_tag.search(line)
if match:
# found closing </script> tag
jshint.stdin.write(line[:match.start()])
line = line[match.end():]
state = 'IGNORE'
else:
jshint.stdin.write(line)
line = None
jshint.stdin.close()
# parse the results
try:
issues = json.loads(json_minify(jshint.stdout.read()))
except ValueError:
print('could not parse data returned from jshint')
sys.exit(1)
# normalize line numbers
input_start_line = int(os.environ['TM_INPUT_START_LINE']) - 1
for issue in issues:
issue['line'] += input_start_line
# add URLs to the issues
if 'TM_FILEPATH' in os.environ:
url_maker = lambda x: \
'txmt://open?url=file://%s&line=%d&column=%d' % \
(os.environ['TM_FILEPATH'], x['line'], x['character'])
else:
url_maker = lambda x: \
'txmt://open?line=%d&column=%d' % (x['line'], x['character'])
for issue in issues:
issue['url'] = url_maker(issue)
# context data we will send to JavaScript
context = {
'jshintrc': jshintrc,
'jshintrcValid': jshintrc_valid,
'issues': issues,
'timestamp': time.strftime('%c')
}
if 'TM_FILEPATH' in os.environ:
context['fileUrl'] = \
'txmt://open?url=file://%s' % os.environ['TM_FILEPATH']
context['targetFilename'] = os.path.basename(os.environ['TM_FILEPATH'])
else:
context['fileUrl'] = 'txmt://open?line=1&column=0'
context['targetFilename'] = '(current unsaved file)'
# Identify the marker file that we will use to indicate the
# TM_FILEPATH of the file currently shown in the validation
# window.
markerDir = get_marker_directory()
hash = hashlib.sha224(context['fileUrl']).hexdigest()
context['markerFile'] = os.path.join(markerDir, hash + '.marker')
context['errorCount'] = \
len([_ for _ in context['issues'] if _['code'][0] == 'E'])
context['warningCount'] = \
len([_ for _ in context['issues'] if _['code'][0] == 'W'])
if context['errorCount'] == 0 and context['warningCount'] == 0:
# There are no errors or warnings. We can bail out if all of
# the following are True:
#
# * There is no validation window currently open for
# this document.
# * quiet is True.
if not os.path.exists(context['markerFile']):
if quiet:
return
# create the marker file
markerFile = open(context['markerFile'], 'w+')
markerFile.close()
# read and prepare the template
my_dir = os.path.abspath(os.path.dirname(__file__))
content_ejs_path = os.path.join(my_dir, 'content.ejs')
content_ejs = open(content_ejs_path, 'r').read()
template_path = os.path.join(my_dir, 'template.html')
template = open(template_path, 'r').read()
template = template.replace('{{ TM_BUNDLE_SUPPORT }}',
os.environ['TM_BUNDLE_SUPPORT'])
template = template.replace('{{ EJS_TEMPLATE }}', json.dumps(content_ejs))
template = template.replace('{{ CONTEXT }}', json.dumps(context))
print(template)
def validate(quiet=False):
# locate the .jshintrc to use
jshintrc = find_jshintrc(os.environ.get("TM_DIRECTORY", None))
jshintrc_valid = False
if jshintrc:
try:
json.loads(json_minify(open(jshintrc, "r").read()))
jshintrc_valid = True
except ValueError:
jshintrc_valid = False
# path to our custom jshint reporter
reporter_path = os.path.join(os.path.abspath(os.path.dirname(__file__)), "reporter.js")
# build jshint args
args = [os.environ.get("TM_JSHINT_EXTERNAL_JSHINT", "jshint"), '--reporter="' + reporter_path + '"']
if jshintrc and jshintrc_valid:
args.append('--config="%s"' % jshintrc)
args.append("-")
# Build env for our command: JSHint (and Node) are often
# installed to /usr/local/bin, which may not be on the
# bundle’s PATH in a default install of TextMate.
env = os.environ.copy()
path_parts = env["PATH"].split(":")
if "/bin" not in path_parts:
path_parts.append("/bin")
if "/usr/bin" not in path_parts:
path_parts.append("/usr/bin")
if "/usr/local/bin" not in path_parts:
path_parts.append("/usr/local/bin")
env["PATH"] = ":".join(path_parts)
try:
jshint = subprocess.Popen(args, stdin=subprocess.PIPE, stdout=subprocess.PIPE, env=env)
except OSError as e:
msg = [
"Hi there. This is the “JavaScript JSHint (External)” bundle for "
+ "TextMate. I validate your code using JSHint.",
"",
"I had the following problem running <code>jshint</code>:",
"",
"<code>%s</code>" % e,
"",
"<h4>How to fix it</h4>",
"Make sure the <code>jshint</code> and <code>node</code> " + "commands are on the <code>PATH</code>.",
"",
"<ol>"
+ "<li>Go to <i>TextMate</i> > <i>Preferences…</i> > "
+ "<i>Variables</i></li>"
+ "<li>Ensure the <code>PATH</code> is enabled there and that "
+ "it includes the location of your <code>jshint</code> "
+ "and <code>node</code> commands.</li>"
"</ol>",
"The path currently used by TextMate bundles is:",
"",
'<div style="overflow:auto"><code>%s</code></div>' % env["PATH"],
"<h4>How to disable validation</h4>",
"If you mistakenly installed this validation tool and want to " + "disable it, you can do so in TextMate:",
"",
"<ol>"
+ "<li>On the TextMate menu, choose "
+ "<i>Bundles</i> > <i>Edit Bundles…</i></li>"
+ "<li>Locate “JavaScript JSHint (External)”</li>"
+ "<li>Uncheck “Enable this item”</li>"
+ "<li>Close the Bundle Editor and choose “Save”</li>"
+ "</ol>",
]
show_error_message("<br>".join(msg))
sys.exit()
# Pipe stdin to the subprocess; if we are validating an HTML
# file with embedded JavaScript, only pipe content within the
# <script>…</script> tags to the subprocess.
if os.environ["TM_SCOPE"].startswith("source.js"):
for line in sys.stdin:
jshint.stdin.write(line)
else:
start_tag = re.compile("(\<\s*script)[\s\>]", re.IGNORECASE)
end_tag = re.compile("\<\/\s*script[\s\>]", re.IGNORECASE)
state = "IGNORE"
for line in sys.stdin:
while line:
if state == "IGNORE":
match = start_tag.search(line)
if match:
# found a script tag
line = " " * match.end(1) + line[match.end(1) :]
state = "LOOK_FOR_END_OF_OPENING_TAG"
else:
jshint.stdin.write("\n")
line = None
elif state == "LOOK_FOR_END_OF_OPENING_TAG":
gt_pos = line.find(">")
if gt_pos != -1:
line = " " * (gt_pos + 1) + line[gt_pos + 1 :]
state = "PIPE_TO_OUTPUT"
else:
jshint.stdin.write("\n")
line = None
elif state == "PIPE_TO_OUTPUT":
match = end_tag.search(line)
if match:
# found closing </script> tag
jshint.stdin.write(line[: match.start()])
line = line[match.end() :]
state = "IGNORE"
else:
jshint.stdin.write(line)
line = None
jshint.stdin.close()
# parse the results
try:
issues = json.loads(json_minify(jshint.stdout.read()))
except ValueError:
print("could not parse data returned from jshint")
sys.exit(1)
# normalize line numbers
input_start_line = int(os.environ["TM_INPUT_START_LINE"]) - 1
for issue in issues:
issue["line"] += input_start_line
# add URLs to the issues
if "TM_FILEPATH" in os.environ:
url_maker = lambda x: "txmt://open?url=file://%s&line=%d&column=%d" % (
os.environ["TM_FILEPATH"],
x["line"],
x["character"],
)
else:
url_maker = lambda x: "txmt://open?line=%d&column=%d" % (x["line"], x["character"])
for issue in issues:
issue["url"] = url_maker(issue)
# context data we will send to JavaScript
context = {
"jshintrc": jshintrc,
"jshintrcValid": jshintrc_valid,
"issues": issues,
"timestamp": time.strftime("%c"),
}
if "TM_FILEPATH" in os.environ:
context["fileUrl"] = "txmt://open?url=file://%s" % os.environ["TM_FILEPATH"]
context["targetFilename"] = os.path.basename(os.environ["TM_FILEPATH"])
else:
context["fileUrl"] = "txmt://open?line=1&column=0"
context["targetFilename"] = "(current unsaved file)"
# Identify the marker file that we will use to indicate the
# TM_FILEPATH of the file currently shown in the validation
# window.
markerDir = get_marker_directory()
hash = hashlib.sha224(context["fileUrl"]).hexdigest()
context["markerFile"] = os.path.join(markerDir, hash + ".marker")
context["errorCount"] = len([_ for _ in context["issues"] if _["code"][0] == "E"])
context["warningCount"] = len([_ for _ in context["issues"] if _["code"][0] == "W"])
if context["errorCount"] == 0 and context["warningCount"] == 0:
# There are no errors or warnings. We can bail out if all of
# the following are True:
#
# * There is no validation window currently open for
# this document.
# * quiet is True.
if not os.path.exists(context["markerFile"]):
if quiet:
return
# create the marker file
markerFile = open(context["markerFile"], "w+")
markerFile.close()
# read and prepare the template
my_dir = os.path.abspath(os.path.dirname(__file__))
content_ejs_path = os.path.join(my_dir, "content.ejs")
content_ejs = open(content_ejs_path, "r").read()
template_path = os.path.join(my_dir, "template.html")
template = open(template_path, "r").read()
template = template.replace("{{ TM_BUNDLE_SUPPORT }}", os.environ["TM_BUNDLE_SUPPORT"])
template = template.replace("{{ EJS_TEMPLATE }}", json.dumps(content_ejs))
template = template.replace("{{ CONTEXT }}", json.dumps(context))
print(template)
def load_json(path):
import json
from minify_json import json_minify
with open(path) as stream:
return json.loads(json_minify(stream.read(), False))
""" Calculate the T10, T14 axis, choose the furthest PMT from the origin."""
dists = sorted( [ [numpy.linalg.norm( pmt - origin ), index] for index, pmt in enumerate( pmtPos ) ], key=lambda tup: tup[0] )
xAxis = pmtPos[dists[-1][1]] - origin
xAxis = xAxis / numpy.linalg.norm( xAxis )
return xAxis
def CalculateT21Axis( pmtPos, origin ):
""" Calculate the T21 axis, use furthest pmts."""
# Now choose the 2 pmtPos furthest from the origin
dists = sorted( [ [numpy.linalg.norm( pmt - origin ), index] for index, pmt in enumerate( pmtPos ) ], key=lambda tup: tup[0] )
xAxis = ( pmtPos[dists[-1][1]] + pmtPos[dists[-2][1]] ) / 2.0 - origin
return xAxis / numpy.linalg.norm( xAxis )
# Now start parsing the file
pmtInfoFile = open( "data/PMTINFO_rat3.ratdb", "r" )
data = yaml.load( json_minify( pmtInfoFile.read(), False ) )
pmtInfoFile.close()
# Loop over the pmts, and condense data to once per panel
newData = {}
newData["panel_number"] = []
newData["panel_type"] = []
newData["r"] = []
newData["s"] = []
newData["t"] = []
newData["u"] = []
newData["v"] = []
newData["w"] = []
newData["x"] = []
newData["y"] = []
newData["z"] = []
def load_json(self, path): import json from minify_json import json_minify with open(path) as stream: return json.loads(json_minify(stream.read(), False))
#!/usr/bin/env python
import yaml # Needs installing
import sys
import numpy
from minify_json import json_minify # In this directory
with open("data/PMTINFO_rat3.ratdb", "r") as original_file:
rat_original = yaml.load(json_minify(original_file.read(), False))
with open("data/snoman_phil.ratdb", "r") as snoman_file:
snoman = yaml.load(json_minify(snoman_file.read(), False))
with open("data/snoman.ratdb", "r") as snoman_file:
rat_snoman = yaml.load(json_minify(snoman_file.read(), False))
with open("data/airfill2.ratdb", "r") as airfill2_file:
airfill2 = yaml.load(json_minify(airfill2_file.read(), False))
with open("data/airfill3.ratdb", "r") as airfill3_file:
airfill3 = yaml.load(json_minify(airfill3_file.read(), False))
# Correct snoman cm to mm
for lcn in range(0, len(snoman["pmt_type"])):
snoman["x"][lcn] = snoman["x"][lcn] * 10.0
snoman["y"][lcn] = snoman["y"][lcn] * 10.0
snoman["z"][lcn] = snoman["z"][lcn] * 10.0
def compare(info1, info2):
for lcn in range(0, len(info1["pmt_type"])):