def draw_top_panel(self):
self.top_panel = wx.Panel(self)
szr = wx.BoxSizer(wx.VERTICAL)
self.top_panel.SetSizer(szr)
grid = wx.FlexGridSizer(cols=4)
szr.Add(grid, 0, wx.ALL)
grid.Add(utils.bold_text(self.top_panel, "Position type:"), 0,
utils.std_sizer_flags, 5)
pos_choice = wx.Choice(parent=self.top_panel,
choices=ramalyze.res_type_labels)
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, pos_choice)
pos_choice.SetSelection(ramalyze.RAMA_GENERAL)
grid.Add(pos_choice, 0, utils.std_sizer_flags, 5)
grid.Add(utils.bold_text(self.top_panel, "Residue name:"), 0,
utils.std_sizer_flags, 5)
aa = [
'ALA',
'ARG',
'ASN',
'ASP',
'CYS',
'GLN',
'GLU',
'HIS',
'LEU',
'LYS',
'MET',
'PHE',
'SER',
'THR',
'TRP',
'TYR',
]
res_choice = wx.Choice(parent=self.top_panel, choices=['*'] + aa)
res_choice.SetSelection(0)
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, res_choice)
res_choice.Disable()
grid.Add(res_choice, 0, utils.std_sizer_flags, 5)
grid.Add(utils.bold_text(self.top_panel, "Show data points:"), 0,
utils.std_sizer_flags, 5)
default = ramalyze.RAMALYZE_ANY
if (self._validation.n_total > 2500):
default = ramalyze.RAMALYZE_NOT_FAVORED
pt_choice = wx.Choice(parent=self.top_panel,
choices=ramalyze.rama_type_labels)
pt_choice.SetSelection(default)
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, pt_choice)
grid.Add(pt_choice, 0, utils.std_sizer_flags, 5)
grid.Add(utils.bold_text(self.top_panel, "Color scheme:"), 0,
utils.std_sizer_flags, 5)
cm_choice = wx.Choice(parent=self.top_panel,
choices=wxtbx.plots.colormap_names)
cm_choice.SetStringSelection("Blue")
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, cm_choice)
grid.Add(cm_choice, 0, utils.std_sizer_flags, 5)
self.choices = [pos_choice, res_choice, pt_choice, cm_choice]
self.show_labels = wx.CheckBox(self.top_panel, label="Show labels")
self.show_labels.SetValue(True)
self.Bind(wx.EVT_CHECKBOX, self.OnUpdatePlot, self.show_labels)
grid.Add(self.show_labels, 0, utils.std_sizer_flags, 5)
def draw_top_panel(self):
self.top_panel = wx.Panel(self)
szr = wx.BoxSizer(wx.VERTICAL)
self.top_panel.SetSizer(szr)
grid = wx.FlexGridSizer(cols=4)
szr.Add(grid, 0, wx.ALL)
grid.Add(utils.bold_text(self.top_panel, "Residue name:"), 0,
utils.std_sizer_flags, 5)
res_choice = wx.Choice(parent=self.top_panel, choices=self.residues)
res_choice.SetSelection(0)
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, res_choice)
grid.Add(res_choice, 0, utils.std_sizer_flags, 5)
grid.Add(utils.bold_text(self.top_panel, "Show data points:"), 0,
utils.std_sizer_flags, 5)
pt_names = ["All", "None", "Outlier"]
pt_choice = wx.Choice(self.top_panel, choices=pt_names)
pt_choice.SetSelection(0)
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, pt_choice)
grid.Add(pt_choice, 0, utils.std_sizer_flags, 5)
grid.Add(utils.bold_text(self.top_panel, "Color scheme:"), 0,
utils.std_sizer_flags, 5)
cm_choice = wx.Choice(parent=self.top_panel,
choices=wxtbx.plots.colormap_names)
cm_choice.SetSelection(5)
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, cm_choice)
grid.Add(cm_choice, 0, utils.std_sizer_flags, 5)
self.choices = [res_choice, pt_choice, cm_choice]
self.show_labels = wx.CheckBox(self.top_panel, label="Show labels")
self.show_labels.SetValue(False)
self.Bind(wx.EVT_CHECKBOX, self.OnUpdatePlot, self.show_labels)
grid.Add(self.show_labels, 0, utils.std_sizer_flags, 5)
def draw_top_panel (self) :
self.top_panel = wx.Panel(self)
szr = wx.BoxSizer(wx.VERTICAL)
self.top_panel.SetSizer(szr)
grid = wx.FlexGridSizer(cols=4)
szr.Add(grid, 0, wx.ALL)
grid.Add(utils.bold_text(self.top_panel, "Residue name:"), 0,
utils.std_sizer_flags, 5)
res_choice = wx.Choice(parent=self.top_panel, choices=self.residues)
res_choice.SetSelection(0)
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, res_choice)
grid.Add(res_choice, 0, utils.std_sizer_flags, 5)
grid.Add(utils.bold_text(self.top_panel, "Show data points:"), 0,
utils.std_sizer_flags, 5)
pt_names = ["All", "None", "Outlier"]
pt_choice = wx.Choice(self.top_panel, choices=pt_names)
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, pt_choice)
grid.Add(pt_choice, 0, utils.std_sizer_flags, 5)
grid.Add(utils.bold_text(self.top_panel, "Color scheme:"), 0,
utils.std_sizer_flags, 5)
cm_choice = wx.Choice(parent=self.top_panel,
choices=wxtbx.plots.colormap_names)
cm_choice.SetSelection(5)
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, cm_choice)
grid.Add(cm_choice, 0, utils.std_sizer_flags, 5)
self.choices = [res_choice, pt_choice, cm_choice]
self.show_labels = wx.CheckBox(self.top_panel, label="Show labels")
self.show_labels.SetValue(False)
self.Bind(wx.EVT_CHECKBOX, self.OnUpdatePlot, self.show_labels)
grid.Add(self.show_labels, 0, utils.std_sizer_flags, 5)
def draw_top_panel (self) :
self.top_panel = wx.Panel(self)
szr = wx.BoxSizer(wx.VERTICAL)
self.top_panel.SetSizer(szr)
grid = wx.FlexGridSizer(cols=4)
szr.Add(grid, 0, wx.ALL)
grid.Add(utils.bold_text(self.top_panel, "Position type:"), 0,
utils.std_sizer_flags, 5)
pos_choice = wx.Choice(parent=self.top_panel,
choices=ramalyze.res_type_labels)
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, pos_choice)
pos_choice.SetSelection(ramalyze.RAMA_GENERAL)
grid.Add(pos_choice, 0, utils.std_sizer_flags, 5)
grid.Add(utils.bold_text(self.top_panel, "Residue name:"), 0,
utils.std_sizer_flags, 5)
aa = ['ALA', 'ARG', 'ASN', 'ASP', 'CYS', 'GLN', 'GLU', 'HIS', 'LEU',
'LYS', 'MET', 'PHE', 'SER', 'THR', 'TRP', 'TYR',]
res_choice = wx.Choice(parent=self.top_panel,
choices=['*']+aa)
res_choice.SetSelection(0)
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, res_choice)
res_choice.Disable()
grid.Add(res_choice, 0, utils.std_sizer_flags, 5)
grid.Add(utils.bold_text(self.top_panel, "Show data points:"), 0,
utils.std_sizer_flags, 5)
default = ramalyze.RAMALYZE_ANY
if (self._validation.n_total > 2500) :
default = ramalyze.RAMALYZE_NOT_FAVORED
pt_choice = wx.Choice(parent=self.top_panel,
choices=ramalyze.rama_type_labels)
pt_choice.SetSelection(default)
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, pt_choice)
grid.Add(pt_choice, 0, utils.std_sizer_flags, 5)
grid.Add(utils.bold_text(self.top_panel, "Color scheme:"), 0,
utils.std_sizer_flags, 5)
cm_choice = wx.Choice(parent=self.top_panel,
choices=wxtbx.plots.colormap_names)
cm_choice.SetStringSelection("Blue")
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, cm_choice)
grid.Add(cm_choice, 0, utils.std_sizer_flags, 5)
self.choices = [pos_choice, res_choice, pt_choice, cm_choice]
self.show_labels = wx.CheckBox(self.top_panel, label="Show labels")
self.show_labels.SetValue(True)
self.Bind(wx.EVT_CHECKBOX, self.OnUpdatePlot, self.show_labels)
grid.Add(self.show_labels, 0, utils.std_sizer_flags, 5)
def draw_top_panel (self) :
self.top_panel = wx.Panel(self)
szr = wx.BoxSizer(wx.VERTICAL)
self.top_panel.SetSizer(szr)
grid = wx.FlexGridSizer(cols=4)
szr.Add(grid, 0, wx.ALL)
grid.Add(utils.bold_text(self.top_panel, "Show residues:"), 0,
utils.std_sizer_flags, 5)
self.range_choice = wx.Choice(parent=self.top_panel,
choices=self._binner.get_ranges())
self.range_choice.SetSelection(0)
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, self.range_choice)
grid.Add(self.range_choice, 0, utils.std_sizer_flags, 5)
grid.Add(utils.bold_text(self.top_panel, "Click to zoom residue:"), 0,
utils.std_sizer_flags, 5)
self.residue_status = wx.TextCtrl(self.top_panel, size=(160,-1),
style=wx.TE_READONLY)
grid.Add(self.residue_status, 0, utils.std_sizer_flags, 5)
def draw_top_panel (self) :
self.top_panel = wx.Panel(self)
szr = wx.BoxSizer(wx.VERTICAL)
self.top_panel.SetSizer(szr)
grid = wx.FlexGridSizer(cols=4)
szr.Add(grid, 0, wx.ALL)
grid.Add(utils.bold_text(self.top_panel, "Show residues:"), 0,
utils.std_sizer_flags, 5)
self.range_choice = wx.Choice(parent=self.top_panel,
choices=self._binner.get_ranges())
self.range_choice.SetSelection(0)
self.Bind(wx.EVT_CHOICE, self.OnUpdatePlot, self.range_choice)
grid.Add(self.range_choice, 0, utils.std_sizer_flags, 5)
grid.Add(utils.bold_text(self.top_panel, "Click to zoom residue:"), 0,
utils.std_sizer_flags, 5)
self.residue_status = wx.TextCtrl(self.top_panel, size=(160,-1),
style=wx.TE_READONLY)
grid.Add(self.residue_status, 0, utils.std_sizer_flags, 5)