def test_invalid_gc_type(self, presenter):
"""When the user submits an invalid type for GC ratio, they
are shown an error.
"""
presenter._user_submits('ATATGCGC', '3', 'invalid gc', '0.65', 0)
assert (presenter.view.mock_calls ==
[call.show_error('Invalid ratio for GC: invalid gc')])
assert presenter.model.mock_calls == []
def test_invalid_gc_type(self, presenter):
"""When the user submits an invalid type for GC ratio, they
are shown an error.
"""
presenter._user_submits('ATATGCGC', '3', 'invalid gc', '0.65', 0)
assert (presenter.view.mock_calls == [
call.show_error('Invalid ratio for GC: invalid gc')
])
assert presenter.model.mock_calls == []
def test_invalid_island_size_type(self, presenter):
"""When the user submits an invalid type of island size, they
are shown an error."""
presenter._user_submits(
'ATATGCGC', 'invalid size', '0.5', '0.65', 0)
assert (presenter.view.mock_calls ==
[call.show_error(
'Invalid integer for island size: invalid size')])
assert presenter.model.mock_calls == []
def test_invalid_sequence(self, presenter):
"""When the user submits a sequence that does not contain
valid bases, they are shown an error."""
presenter._user_submits('ABCD', '3', '0.5', '0.65', 0)
assert (presenter.view.mock_calls == [call.show_error(
'Sequence letters not within alphabet:\n'
' Alphabet: GATC\n'
' Sequence: ABCD')])
assert presenter.model.mock_calls == []
def test_invalid_sequence(self, presenter):
presenter.model.load_file.side_effect = ValueError(
'this is a fake message')
presenter._file_loaded(sentinel.file_path)
assert (presenter.model.mock_calls ==
[call.load_file(sentinel.file_path)])
assert (presenter.view.mock_calls ==
[call.show_error(
'Sequence parsing error: this is a fake message')])
def test_invalid_island_size_type(self, presenter):
"""When the user submits an invalid type of island size, they
are shown an error."""
presenter._user_submits('ATATGCGC', 'invalid size', '0.5', '0.65',
0)
assert (presenter.view.mock_calls == [
call.show_error(
'Invalid integer for island size: invalid size')
])
assert presenter.model.mock_calls == []
def test_invalid_sequence(self, presenter):
"""When the user submits a sequence that does not contain
valid bases, they are shown an error."""
presenter._user_submits('ABCD', '3', '0.5', '0.65', 0)
assert (presenter.view.mock_calls == [
call.show_error('Sequence letters not within alphabet:\n'
' Alphabet: GATC\n'
' Sequence: ABCD')
])
assert presenter.model.mock_calls == []
def test_invalid_min_obs_exp_cpg_type(self, presenter):
"""When the user submits an invalid type for minimum
observed/expected CpG ratio, they are shown an error.
"""
presenter._user_submits('ATATGCGC', '3', '0.5',
'invalid obsexpcpg', 0)
assert (presenter.view.mock_calls == [
call.show_error('Invalid ratio for minimum observed/expected '
'CpG ratio: invalid obsexpcpg')
])
assert presenter.model.mock_calls == []
def test_invalid_sequence(self, presenter):
presenter.model.load_file.side_effect = ValueError(
'this is a fake message')
presenter._file_loaded(sentinel.file_path)
assert (presenter.model.mock_calls == [
call.load_file(sentinel.file_path)
])
assert (presenter.view.mock_calls == [
call.show_error(
'Sequence parsing error: this is a fake message')
])
def test_invalid_min_obs_exp_cpg_type(self, presenter):
"""When the user submits an invalid type for minimum
observed/expected CpG ratio, they are shown an error.
"""
presenter._user_submits(
'ATATGCGC', '3', '0.5', 'invalid obsexpcpg', 0)
assert (presenter.view.mock_calls ==
[call.show_error(
'Invalid ratio for minimum observed/expected '
'CpG ratio: invalid obsexpcpg')])
assert presenter.model.mock_calls == []
