def test_add_verified_region(self):
seq_example = 'AAaa'
verified_region_to_add_example = (3, 3)
expected_verified_regions = [(0, 1), (3, 3)]
expected_record_seq = 'AAaA'
epitope = Epitope(SeqRecord(Seq(seq_example)))
epitope.add_verified_region(verified_region_to_add_example)
actual_verified_regions = epitope.verified_regions
actual_record_seq = str(epitope.record.seq)
self.assertEqual(expected_verified_regions, actual_verified_regions)
self.assertEqual(expected_record_seq, actual_record_seq)
def _add_verified_regions_lst(epitope: Epitope, verified_regions_lst: List[Tuple[int, int]]) -> Epitope:
for verified_region in verified_regions_lst:
epitope.add_verified_region(verified_region)
return epitope