def loadtree(hdfnode, moosenode):
"""Load the element tree saved under the group `hdfnode` into `moosenode`"""
pathclass = {}
basepath = hdfnode.attr['path']
if basepath != '/':
basepath = basepath + '/'
emdata = hdfnode['vec'][:]
sorted_paths = sorted(emdata['path'], key=lambda x: x.count('/'))
dims = dict(emdata['path', 'dims'])
classes = dict(emdata['path', 'class'])
current = moose.getCwe()
moose.setCwe(moosenode)
# First create all the ematrices
for path in sorted_paths:
rpath = path[len(basepath):]
classname = classes[path]
shape = dims[path]
em = moose.vec(rpath, shape, classname)
wfields = {}
for cinfo in moose.element('/classes').children:
cname = cinfo[0].name
wfields[cname] = [f[len('set_'):] for f in moose.getFieldNames(cname, 'destFinfo')
if f.startswith('set_') and f not in ['set_this', 'set_name', 'set_lastDimension', 'set_runTime'] and not f.startswith('set_num_')]
for key in hdfnode['/elements']:
dset = hdfnode['/elements/'][key][:]
fieldnames = dset.dtype.names
for ii in range(len(dset)):
obj = moose.element(dset['path'][ii][len(basepath):])
for f in wfields[obj.className]:
obj.setField(f, dset[f][ii])
def connectBioModel(self):
connecttoBioModel = BioModelsClientWidget()
if connecttoBioModel.exec_():
pass
filepath = connecttoBioModel.filePath
if filepath:
head, fileName = os.path.split(filepath)
modelName = os.path.splitext(fileName)[0]
pwe = moose.getCwe()
ret = loadFile(str(filepath), '/model/%s' % (modelName), merge=False)
self.objectEditSlot('/',False)
pluginLookup = '%s/%s' % (ret['modeltype'], ret['subtype'])
try:
pluginName = subtype_plugin_map['%s/%s' % (ret['modeltype'], ret['subtype'])]
except KeyError:
pluginName = 'default'
print 'Loaded model', ret['model'].path,subtype
self._loadedModels.append([ret['model'].path,pluginName])
if len(self._loadedModels)>5:
self._loadedModels.pop(0)
if not moose.exists(ret['model'].path+'/info'):
moose.Annotator(ret['model'].path+'/info')
modelAnno = moose.Annotator(ret['model'].path+'/info')
if ret['subtype']:
modelAnno.modeltype = ret['subtype']
else:
modelAnno.modeltype = ret['modeltype']
modelAnno.dirpath = str(dialog.directory().absolutePath())
self.loadedModelsAction(ret['model'].path,pluginName)
self.setPlugin(pluginName, ret['model'].path)
def loadtree(hdfnode, moosenode):
"""Load the element tree saved under the group `hdfnode` into `moosenode`"""
pathclass = {}
basepath = hdfnode.attr['path']
if basepath != '/':
basepath = basepath + '/'
emdata = hdfnode['vec'][:]
sorted_paths = sorted(emdata['path'], key=lambda x: x.count('/'))
dims = dict(emdata['path', 'dims'])
classes = dict(emdata['path', 'class'])
current = moose.getCwe()
moose.setCwe(moosenode)
# First create all the ematrices
for path in sorted_paths:
rpath = path[len(basepath):]
classname = classes[path]
shape = dims[path]
em = moose.vec(rpath, shape, classname)
wfields = {}
for cinfo in moose.element('/classes').children:
cname = cinfo[0].name
wfields[cname] = [
f[len('set_'):] for f in moose.getFieldNames(cname, 'destFinfo')
if f.startswith('set_') and f not in
['set_this', 'set_name', 'set_lastDimension', 'set_runTime']
and not f.startswith('set_num_')
]
for key in hdfnode['/elements']:
dset = hdfnode['/elements/'][key][:]
fieldnames = dset.dtype.names
for ii in range(len(dset)):
obj = moose.element(dset['path'][ii][len(basepath):])
for f in wfields[obj.className]:
obj.setField(f, dset[f][ii])
def pwe():
"""Print present working element. Convenience function for GENESIS
users. If you want to retrieve the element in stead of printing
the path, use moose.getCwe()
"""
pwe_ = moose.getCwe()
print(pwe_.getPath())
return pwe_
def pwe():
"""Print present working element. Convenience function for GENESIS
users. If you want to retrieve the element in stead of printing
the path, use moose.getCwe()
"""
pwe_ = moose.getCwe()
print(pwe_.getPath())
return pwe_
def loadFile(filename, target, merge=True):
"""Try to load a model from specified `filename` under the element
`target`.
if `merge` is True, the contents are just loaded at target. If
false, everything is deleted from the parent of target unless the
parent is root.
Returns
-------
a dict containing at least these three entries:
modeltype: type of the loaded model.
subtype: subtype of the loaded model, None if no specific subtype
modelroot: root element of the model, None if could not be located - as is the case with Python scripts
"""
istext = True
with open(filename, 'rb') as infile:
istext = mtypes.istextfile(infile)
if not istext:
print 'Cannot handle any binary formats yet'
return None
parent, child = posixpath.split(target)
p = moose.Neutral(parent)
if not merge and p.path != '/':
for ch in p.children:
moose.delete(ch)
try:
modeltype = mtypes.getType(filename)
subtype = mtypes.getSubtype(filename, modeltype)
except KeyError:
raise FileLoadError('Do not know how to handle this filetype: %s' % (filename))
pwe = moose.getCwe()
if modeltype == 'genesis':
if subtype == 'kkit' or subtype == 'prototype':
model = moose.loadModel(filename, target)
else:
print 'Only kkit and prototype files can be loaded.'
elif modeltype == 'cspace':
model = moose.loadModel(filename, target)
elif modeltype == 'xml' and subtype == 'neuroml':
model = neuroml.loadNeuroML_L123(filename)
else:
raise FileLoadError('Do not know how to handle this filetype: %s' % (filename))
moose.setCwe(pwe) # The MOOSE loadModel changes the current working element to newly loaded model. We revert that behaviour
# TODO: check with Aditya how to specify the target for
# neuroml reader
return {'modeltype': modeltype,
'subtype': subtype,
'model': model}
def connectBioModel(self):
connecttoBioModel = BioModelsClientWidget()
if connecttoBioModel.exec_():
pass
filepath = connecttoBioModel.filePath
if filepath:
head, fileName = os.path.split(filepath)
modelName = os.path.splitext(fileName)[0]
pwe = moose.getCwe()
ret = loadFile(str(filepath), '/model/%s' % (modelName), merge=False)
self.objectEditSlot('/',False)
pluginLookup = '%s/%s' % (ret['modeltype'], ret['subtype'])
try:
pluginName = subtype_plugin_map['%s/%s' % (ret['modeltype'], ret['subtype'])]
except KeyError:
pluginName = 'default'
print 'Loaded model', ret['model'].path
self.setPlugin(pluginName, ret['model'].path)
def test_children():
a1 = moose.Neutral('/a')
a2 = moose.Neutral('/a/b')
a3 = moose.Neutral('/a/b/c1')
moose.Neutral('/a/b/c2')
assert len(a1.children) == 1
assert len(a2.children) == 2
moose.le(a1)
moose.le(a2)
moose.le(a3)
moose.setCwe(a3)
s = moose.getCwe()
assert s == a3, (s, a3)
a11 = a1.children[0]
ax = moose.element(a1)
ax1 = ax.children[0]
assert ax == a1
assert ax1 == a11
assert a11[0].isA['Neutral'], a11.isA
assert ax1[0].isA['Neutral'], a11.isA
print("test_children is done")
def loadFile(filename, target, solver="gsl", merge=True):
"""Try to load a model from specified `filename` under the element
`target`.
if `merge` is True, the contents are just loaded at target. If
false, everything is deleted from the parent of target unless the
parent is root.
Returns
-------
a dict containing at least these three entries:
modeltype: type of the loaded model.
subtype: subtype of the loaded model, None if no specific subtype
modelroot: root element of the model, None if could not be located - as is the case with Python scripts
"""
num = 1
newTarget = target
while moose.exists(newTarget):
newTarget = target + "-" + str(num)
num = num + 1
target = newTarget
istext = True
with open(filename, 'rb') as infile:
istext = mtypes.istextfile(infile)
if not istext:
print 'Cannot handle any binary formats yet'
return None
parent, child = posixpath.split(target)
p = moose.Neutral(parent)
if not merge and p.path != '/':
for ch in p.children:
moose.delete(ch)
try:
modeltype = mtypes.getType(filename)
subtype = mtypes.getSubtype(filename, modeltype)
except KeyError:
raise FileLoadError('Do not know how to handle this filetype: %s' %
(filename))
pwe = moose.getCwe()
#self.statusBar.showMessage('Loading model, please wait')
# app = QtGui.qApp
# app.setOverrideCursor(QtGui.QCursor(Qt.Qt.BusyCursor)) #shows a hourglass - or a busy/working arrow
if modeltype == 'genesis':
if subtype == 'kkit' or subtype == 'prototype':
model, modelpath = loadGenCsp(target, filename, solver)
if moose.exists(moose.element(modelpath).path):
moose.Annotator(moose.element(modelpath).path +
'/info').modeltype = "kkit"
else:
print " path doesn't exists"
moose.le(modelpath)
else:
print 'Only kkit and prototype files can be loaded.'
elif modeltype == 'cspace':
model, modelpath = loadGenCsp(target, filename)
if moose.exists(modelpath):
moose.Annotator(
(moose.element(modelpath).path + '/info')).modeltype = "cspace"
addSolver(modelpath, 'gsl')
elif modeltype == 'xml':
if subtype == 'neuroml':
popdict, projdict = neuroml.loadNeuroML_L123(filename)
# Circus to get the container of populations from loaded neuroml
for popinfo in popdict.values():
for cell in popinfo[1].values():
solver = moose.HSolve(cell.path + "/hsolve")
solver.target = cell.path
# model = cell.parent
# break
# break
# Moving model to a new location under the model name
# model name is the filename without extension
model = moose.Neutral("/" + splitext(basename(filename))[0])
element = moose.Neutral(model.path + "/model")
if (moose.exists("/cells")): moose.move("/cells", element.path)
if (moose.exists("/elec")): moose.move("/elec", model.path)
if (moose.exists("/library")): moose.move("/library", model.path)
# moose.move("cells/", cell.path)
elif subtype == 'sbml':
if target != '/':
if moose.exists(target):
moose.delete(target)
model = mooseReadSBML(filename, target)
if moose.exists(moose.element(model).path):
moose.Annotator(moose.element(model).path +
'/info').modeltype = "sbml"
addSolver(target, 'gsl')
else:
raise FileLoadError('Do not know how to handle this filetype: %s' %
(filename))
moose.setCwe(
pwe
) # The MOOSE loadModel changes the current working element to newly loaded model. We revert that behaviour
# TODO: check with Aditya how to specify the target for
# neuroml reader
# app.restoreOverrideCursor()
return {'modeltype': modeltype, 'subtype': subtype, 'model': model}
def loadFile(filename, target, solver="gsl", merge=True):
"""Try to load a model from specified `filename` under the element
`target`.
if `merge` is True, the contents are just loaded at target. If
false, everything is deleted from the parent of target unless the
parent is root.
Returns
-------
a dict containing at least these three entries:
modeltype: type of the loaded model.
subtype: subtype of the loaded model, None if no specific subtype
modelroot: root element of the model, None if could not be located - as is the case with Python scripts
"""
num = 1
newTarget = target
while moose.exists(newTarget):
newTarget = target + "-" + str(num)
num = num + 1
target = newTarget
istext = True
with open(filename, "rb") as infile:
istext = mtypes.istextfile(infile)
if not istext:
print("Cannot handle any binary formats yet")
return None
parent, child = posixpath.split(target)
p = moose.Neutral(parent)
if not merge and p.path != "/":
for ch in p.children:
moose.delete(ch)
try:
modeltype = mtypes.getType(filename)
subtype = mtypes.getSubtype(filename, modeltype)
except KeyError:
raise FileLoadError("Do not know how to handle this filetype: %s" % (filename))
pwe = moose.getCwe()
# self.statusBar.showMessage('Loading model, please wait')
# app = QtGui.qApp
# app.setOverrideCursor(QtGui.QCursor(Qt.Qt.BusyCursor)) #shows a hourglass - or a busy/working arrow
if modeltype == "genesis":
if subtype == "kkit" or subtype == "prototype":
model, modelpath = loadGenCsp(target, filename, solver)
if moose.exists(moose.element(modelpath).path):
moose.Annotator(moose.element(modelpath).path + "/info").modeltype = "kkit"
else:
print(" path doesn't exists")
moose.le(modelpath)
else:
print("Only kkit and prototype files can be loaded.")
elif modeltype == "cspace":
model, modelpath = loadGenCsp(target, filename)
if moose.exists(modelpath):
moose.Annotator((moose.element(modelpath).path + "/info")).modeltype = "cspace"
addSolver(modelpath, "gsl")
elif modeltype == "xml":
if subtype == "neuroml":
popdict, projdict = neuroml.loadNeuroML_L123(filename)
# Circus to get the container of populations from loaded neuroml
for popinfo in list(popdict.values()):
for cell in list(popinfo[1].values()):
solver = moose.HSolve(cell.path + "/hsolve")
solver.target = cell.path
# model = cell.parent
# break
# break
# Moving model to a new location under the model name
# model name is the filename without extension
model = moose.Neutral("/" + splitext(basename(filename))[0])
element = moose.Neutral(model.path + "/model")
if moose.exists("/cells"):
moose.move("/cells", element.path)
if moose.exists("/elec"):
moose.move("/elec", model.path)
if moose.exists("/library"):
moose.move("/library", model.path)
# moose.move("cells/", cell.path)
elif subtype == "sbml":
if target != "/":
if moose.exists(target):
moose.delete(target)
model = mooseReadSBML(filename, target)
if moose.exists(moose.element(model).path):
moose.Annotator(moose.element(model).path + "/info").modeltype = "sbml"
addSolver(target, "gsl")
else:
raise FileLoadError("Do not know how to handle this filetype: %s" % (filename))
moose.setCwe(
pwe
) # The MOOSE loadModel changes the current working element to newly loaded model. We revert that behaviour
# TODO: check with Aditya how to specify the target for
# neuroml reader
# app.restoreOverrideCursor()
return {"modeltype": modeltype, "subtype": subtype, "model": model}
def loadFile(filename, target, solver="gsl", merge=True):
"""Try to load a model from specified `filename` under the element
`target`.
if `merge` is True, the contents are just loaded at target. If
false, everything is deleted from the parent of target unless the
parent is root.
Returns
-------
a dict containing at least these three entries:
modeltype: type of the loaded model.
subtype: subtype of the loaded model, None if no specific subtype
modelroot: root element of the model, None if could not be located - as is the case with Python scripts
"""
loaderror = ""
num = 1
libsfound = True
model = '/'
newTarget = target
while moose.exists(newTarget):
newTarget = target + "-" + str(num)
num = num + 1
target = newTarget
istext = True
with open(filename, 'rb') as infile:
istext = mtypes.istextfile(infile)
if not istext:
print('Cannot handle any binary formats yet')
return None
# parent, child = posixpath.split(target)
# p = moose.Neutral(parent)
# if not merge and p.path != '/':
# for ch in p.children:
# moose.delete(ch)
try:
modeltype = mtypes.getType(filename)
subtype = mtypes.getSubtype(filename, modeltype)
except KeyError:
raise FileLoadError('Do not know how to handle this filetype: %s' %
(filename))
pwe = moose.getCwe()
#self.statusBar.showMessage('Loading model, please wait')
# app = QtGui.qApp
# app.setOverrideCursor(QtGui.QCursor(Qt.Qt.BusyCursor)) #shows a hourglass - or a busy/working arrow
if modeltype == 'genesis':
if subtype == 'kkit' or subtype == 'prototype':
model, modelpath = loadGenCsp(target, filename, solver)
xcord, ycord = [], []
if moose.exists(moose.element(modelpath).path):
process = True
compt = len(moose.wildcardFind(modelpath +
'/##[ISA=CubeMesh]'))
if not compt:
loaderror = "Model has no compartment, atleast one compartment should exist to display the widget"
process = False
else:
p = len(moose.wildcardFind(modelpath +
'/##[ISA=PoolBase]'))
if p < 2:
loaderror = "Model has no pool, atleast two pool should exist to display the widget"
process = False
if process:
if moose.exists(moose.element(modelpath).path):
mObj = moose.wildcardFind(
moose.element(modelpath).path + '/##[ISA=PoolBase]' +
',' + moose.element(modelpath).path +
'/##[ISA=ReacBase]' + ',' +
moose.element(modelpath).path + '/##[ISA=EnzBase]' +
',' + moose.element(modelpath).path +
'/##[ISA=StimulusTable]')
for p in mObj:
if not isinstance(moose.element(p.parent),
moose.CplxEnzBase):
xcord.append(moose.element(p.path + '/info').x)
ycord.append(moose.element(p.path + '/info').y)
recalculatecoordinatesforKkit(mObj, xcord, ycord)
for ememb in moose.wildcardFind(
moose.element(modelpath).path +
'/##[ISA=EnzBase]'):
objInfo = ememb.path + '/info'
#Enzyme's textcolor (from kkit) will be bgcolor (in moose)
if moose.exists(objInfo):
bgcolor = moose.element(objInfo).color
moose.element(objInfo).color = moose.element(
objInfo).textColor
moose.element(objInfo).textColor = bgcolor
moose.Annotator(moose.element(modelpath).path +
'/info').modeltype = "kkit"
else:
print(" path doesn't exists")
moose.le(modelpath)
else:
print('Only kkit and prototype files can be loaded.')
elif modeltype == 'cspace':
model, modelpath = loadGenCsp(target, filename)
if moose.exists(modelpath):
moose.Annotator(
(moose.element(modelpath).path + '/info')).modeltype = "cspace"
addSolver(modelpath, 'gsl')
elif modeltype == 'xml':
if subtype == 'neuroml':
popdict, projdict = neuroml.loadNeuroML_L123(filename)
# Circus to get the container of populations from loaded neuroml
for popinfo in popdict.values():
for cell in popinfo[1].values():
solver = moose.HSolve(cell.path + "/hsolve")
solver.target = cell.path
# model = cell.parent
# break
# break
# Moving model to a new location under the model name
# model name is the filename without extension
model = moose.Neutral("/" + splitext(basename(filename))[0])
element = moose.Neutral(model.path + "/model")
if (moose.exists("/cells")): moose.move("/cells", element.path)
if (moose.exists("/elec")): moose.move("/elec", model.path)
if (moose.exists("/library")): moose.move("/library", model.path)
# moose.move("cells/", cell.path)
elif subtype == 'sbml':
foundLibSBML_ = False
try:
import libsbml
foundLibSBML_ = True
except ImportError:
pass
if foundLibSBML_:
if target != '/':
if moose.exists(target):
moose.delete(target)
model, loaderror = mooseReadSBML(filename, target)
if moose.exists(moose.element(model).path):
moose.Annotator(moose.element(model).path +
'/info').modeltype = "sbml"
addSolver(target, 'gsl')
libsfound = foundLibSBML_
else:
raise FileLoadError('Do not know how to handle this filetype: %s' %
(filename))
moose.setCwe(
pwe
) # The MOOSE loadModel changes the current working element to newly loaded model. We revert that behaviour
# TODO: check with Aditya how to specify the target for
# neuroml reader
# app.restoreOverrideCursor()
return {
'modeltype': modeltype,
'subtype': subtype,
'model': model,
'foundlib': libsfound,
'loaderror': loaderror
}
def loadFile(filename, target, merge=True):
"""Try to load a model from specified `filename` under the element
`target`.
if `merge` is True, the contents are just loaded at target. If
false, everything is deleted from the parent of target unless the
parent is root.
Returns
-------
a dict containing at least these three entries:
modeltype: type of the loaded model.
subtype: subtype of the loaded model, None if no specific subtype
modelroot: root element of the model, None if could not be located - as is the case with Python scripts
"""
istext = True
with open(filename, 'rb') as infile:
istext = mtypes.istextfile(infile)
if not istext:
print 'Cannot handle any binary formats yet'
return None
parent, child = posixpath.split(target)
p = moose.Neutral(parent)
if not merge and p.path != '/':
for ch in p.children:
moose.delete(ch)
try:
modeltype = mtypes.getType(filename)
subtype = mtypes.getSubtype(filename, modeltype)
except KeyError:
raise FileLoadError('Do not know how to handle this filetype: %s' % (filename))
pwe = moose.getCwe()
#self.statusBar.showMessage('Loading model, please wait')
# app = QtGui.qApp
# app.setOverrideCursor(QtGui.QCursor(Qt.Qt.BusyCursor)) #shows a hourglass - or a busy/working arrow
if modeltype == 'genesis':
if subtype == 'kkit' or subtype == 'prototype':
model = moose.loadModel(filename, target,'gsl')
#Harsha: Moving the model under /modelname/model and graphs under /model/graphs
lmodel = moose.Neutral('%s/%s' %(model.path,"model"))
for compt in moose.wildcardFind(model.path+'/##[ISA=ChemCompt]'):
moose.move(compt.path,lmodel)
if not moose.exists(model.path+'/data'):
graphspath = moose.Neutral('%s/%s' %(model.path,"data"))
dataPath = moose.element(model.path+'/data')
i =0
nGraphs = moose.wildcardFind(model.path+'/graphs/##[TYPE=Table2]')
for graphs in nGraphs:
if not moose.exists(dataPath.path+'/graph_'+str(i)):
graphspath = moose.Neutral('%s/%s' %(dataPath.path,"graph_"+str(i)))
else:
graphspath = moose.element(dataPath.path+'/graph_'+str(i))
moose.move(graphs.path,graphspath)
if len(nGraphs) > 0:
i = i+1
#print " i ", i,moose.wildcardFind(model.path+'/moregraphs/##[TYPE=Table2]')
for moregraphs in moose.wildcardFind(model.path+'/moregraphs/##[TYPE=Table2]'):
if not moose.exists(dataPath.path+'/graph_'+str(i)):
graphspath = moose.Neutral('%s/%s' %(dataPath.path,"graph_"+str(i)))
else:
graphspath = moose.element(dataPath.path+'/graph_'+str(i))
moose.move(moregraphs.path,graphspath)
moose.delete(model.path+'/graphs')
moose.delete(model.path+'/moregraphs')
else:
print 'Only kkit and prototype files can be loaded.'
elif modeltype == 'cspace':
model = moose.loadModel(filename, target,'gsl')
#Harsha: Moving the model under /modelname/model and graphs under /model/graphs
lmodel = moose.Neutral('%s/%s' %(model.path,"model"))
for compt in moose.wildcardFind(model.path+'/##[ISA=ChemCompt]'):
moose.move(compt.path,lmodel)
if not moose.exists(model.path+'/data'):
graphspath = moose.Neutral('%s/%s' %(model.path,"data"))
dataPath = moose.element(model.path+'/data')
i =0
nGraphs = moose.wildcardFind(model.path+'/graphs/##[TYPE=Table2]')
for graphs in nGraphs:
if not moose.exists(dataPath.path+'/graph_'+str(i)):
graphspath = moose.Neutral('%s/%s' %(dataPath.path,"graph_"+str(i)))
else:
graphspath = moose.element(dataPath.path+'/graph_'+str(i))
moose.move(graphs.path,graphspath)
if len(nGraphs) > 0:
i = i+1
#print " i ", i,moose.wildcardFind(model.path+'/moregraphs/##[TYPE=Table2]')
for moregraphs in moose.wildcardFind(model.path+'/moregraphs/##[TYPE=Table2]'):
if not moose.exists(dataPath.path+'/graph_'+str(i)):
graphspath = moose.Neutral('%s/%s' %(dataPath.path,"graph_"+str(i)))
else:
graphspath = moose.element(dataPath.path+'/graph_'+str(i))
moose.move(moregraphs.path,graphspath)
moose.delete(model.path+'/graphs')
moose.delete(model.path+'/moregraphs')
addSolver(target,'gsl')
elif modeltype == 'xml':
if subtype == 'neuroml':
popdict, projdict = neuroml.loadNeuroML_L123(filename)
# Circus to get the container of populations from loaded neuroml
for popinfo in popdict.values():
for cell in popinfo[1].values():
solver = moose.HSolve(cell.path + "/hsolve")
solver.target = cell.path
# model = cell.parent
# break
# break
# Moving model to a new location under the model name
# model name is the filename without extension
model = moose.Neutral("/" + splitext(basename(filename))[0])
element = moose.Neutral(model.path + "/model")
if(moose.exists("/cells")) : moose.move("/cells" , element.path)
if(moose.exists("/elec")) : moose.move("/elec" , model.path)
if(moose.exists("/library")): moose.move("/library", model.path)
# moose.move("cells/", cell.path)
elif subtype == 'sbml':
model = moose.readSBML(filename,target,'gsl')
addSolver(target,'gsl')
else:
raise FileLoadError('Do not know how to handle this filetype: %s' % (filename))
moose.setCwe(pwe) # The MOOSE loadModel changes the current working element to newly loaded model. We revert that behaviour
# TODO: check with Aditya how to specify the target for
# neuroml reader
# app.restoreOverrideCursor()
return {'modeltype': modeltype,
'subtype': subtype,
'model': model}