コード例 #1
0
ファイル: test_me2n2.py プロジェクト: Dayou-Zhang/mrh
    def test_derivatives(self):
        np.random.seed(1)
        las = LASSCF(mf, (4, ),
                     (4, ), spin_sub=(1, )).set(max_cycle_macro=1,
                                                ah_level_shift=0).run()
        ugg = las.get_ugg()
        ci0_csf = np.random.rand(ugg.ncsf_sub[0][0])
        ci0_csf /= np.linalg.norm(ci0_csf)
        ci0 = ugg.ci_transformers[0][0].vec_csf2det(ci0_csf)
        las_gorb, las_gci = las.get_grad(mo_coeff=mf.mo_coeff, ci=[[ci0]])[:2]
        las_grad = np.append(las_gorb, las_gci)
        las_hess = las.get_hop(ugg=ugg, mo_coeff=mf.mo_coeff, ci=[[ci0]])
        self.assertAlmostEqual(lib.fp(las_grad), lib.fp(las_hess.get_grad()),
                               8)
        cas_grad, _, cas_hess, _ = newton_casscf.gen_g_hop(
            mc, mf.mo_coeff, ci0, mc.ao2mo(mf.mo_coeff))
        _pack_ci, _unpack_ci = newton_casscf._pack_ci_get_H(
            mc, mf.mo_coeff, ci0)[-2:]

        def pack_cas(kappa, ci1):
            return np.append(mc.pack_uniq_var(kappa), _pack_ci(ci1))

        def unpack_cas(x):
            return mc.unpack_uniq_var(x[:ugg.nvar_orb]), _unpack_ci(
                x[ugg.nvar_orb:])

        def cas2las(y, mode='hx'):
            yorb, yci = unpack_cas(y)
            yc = yci[0].ravel().dot(ci0.ravel())
            yci[0] -= yc * ci0
            yorb *= (0.5 if mode == 'hx' else 1)
            return ugg.pack(yorb, [yci])

        def las2cas(y, mode='x'):
            yorb, yci = ugg.unpack(y)
            yc = yci[0][0].ravel().dot(ci0.ravel())
            yci[0][0] -= yc * ci0
            yorb *= (0.5 if mode == 'x' else 1)
            return pack_cas(yorb, yci[0])

        cas_grad = cas2las(cas_grad)
        self.assertAlmostEqual(lib.fp(las_grad), lib.fp(cas_grad), 8)
        x = np.random.rand(ugg.nvar_tot)
        # orb on input
        x_las = x.copy()
        x_las[ugg.nvar_orb:] = 0.0
        x_cas = las2cas(x_las, mode='x')
        hx_las = las_hess._matvec(x_las)
        hx_cas = cas2las(cas_hess(x_cas), mode='x')
        self.assertAlmostEqual(lib.fp(hx_las), lib.fp(hx_cas), 8)
        # CI on input
        x_las = x.copy()
        x_las[:ugg.nvar_orb] = 0.0
        x_cas = las2cas(x_las, mode='hx')
        hx_las = las_hess._matvec(x_las)
        hx_cas = cas2las(cas_hess(x_cas), mode='hx')
        self.assertAlmostEqual(lib.fp(hx_las), lib.fp(hx_cas), 8)
コード例 #2
0
from mrh.my_pyscf.mcscf.lasscf_testing import LASSCF

dr_nn = 2.0
mol = struct(dr_nn, dr_nn, '6-31g', symmetry=False)
mol.verbose = lib.logger.DEBUG
mol.output = '/dev/null'
mol.spin = 0
mol.build()
mf = scf.RHF(mol).run()
las = LASSCF(mf, (4, 4), ((3, 1), (1, 3)), spin_sub=(3, 3))
las.max_cycle_macro = 1
las.kernel()
las.mo_coeff = np.loadtxt('test_lasci_mo.dat')
las.ci = [[np.loadtxt('test_lasci_ci0.dat')],
          [-np.loadtxt('test_lasci_ci1.dat').T]]
ugg = las.get_ugg()
h_op = las.get_hop(ugg=ugg)
np.random.seed(0)
x = np.random.rand(ugg.nvar_tot)


def tearDownModule():
    global mol, mf, las, ugg, h_op, x
    mol.stdout.close()
    del mol, mf, las, ugg, h_op, x


class KnownValues(unittest.TestCase):
    def test_grad(self):
        gorb0, gci0, gx0 = las.get_grad(ugg=ugg)
        grad0 = np.append(gorb0, gci0)
コード例 #3
0
import os

mol = struct(2.0, 2.0, '6-31g', symmetry=False)
mol.output = 'sa_lasscf_testing.log'
mol.verbose = lib.logger.DEBUG
mol.build()
mf = scf.RHF(mol).run()
mo_coeff = mf.mo_coeff.copy()
las = LASSCF(mf, (4, 4), (4, 4), spin_sub=(1, 1))
mo_loc = las.localize_init_guess((list(range(3)), list(range(9, 12))),
                                 mo_coeff=mo_coeff)
las.state_average_(weights=[0.5, 0.5], spins=[[0, 0], [2, -2]])
las.set(max_cycle_macro=1, max_cycle_micro=1, ah_level_shift=0).kernel()

np.random.seed(1)
ugg = las.get_ugg()
ci0 = [np.random.rand(ncsf) for ncsf in ugg.ncsf_sub.ravel()]
ci0 = [c / linalg.norm(c) for c in ci0]
x0 = np.concatenate([
    np.zeros(ugg.nvar_orb),
] + ci0)
_, ci0_sa = ugg.unpack(x0)
las.mo_coeff = mo_loc
las.ci = ci0_sa
hop = las.get_hop(ugg=ugg)

ci0_sing = [[ci0_sa[0][0]], [ci0_sa[1][0]]]
las_sing = LASSCF(mf, (4, 4), (4, 4), spin_sub=(1, 1)).set(mo_coeff=mo_loc,
                                                           ci=ci0_sing)
las_sing = las_sing.set(ah_level_shift=0, max_cycle_macro=1,
                        max_cycle_micro=1).run()
コード例 #4
0
ファイル: test_me2n2_sa.py プロジェクト: Dayou-Zhang/mrh
    def test_derivatives(self):
        np.random.seed(1)
        las = LASSCF(mf, (4, ), (4, ), spin_sub=(1, )).set(max_cycle_macro=1,
                                                           ah_level_shift=0)
        las.state_average_(weights=[0.5, 0.5],
                           charges=[0, 0],
                           spins=[0, 2],
                           smults=[1, 3]).run()
        ugg = las.get_ugg()
        ci0_csf = [np.random.rand(ncsf) for ncsf in ugg.ncsf_sub[0]]
        ci0_csf = [c / np.linalg.norm(c) for c in ci0_csf]
        ci0 = [
            t.vec_csf2det(c) for t, c in zip(ugg.ci_transformers[0], ci0_csf)
        ]
        las_gorb, las_gci = las.get_grad(mo_coeff=mf.mo_coeff, ci=[ci0])[:2]
        las_grad = np.append(las_gorb, las_gci)
        las_hess = las.get_hop(ugg=ugg, mo_coeff=mf.mo_coeff, ci=[ci0])
        self.assertAlmostEqual(lib.fp(las_grad), lib.fp(las_hess.get_grad()),
                               8)
        cas_grad, _, cas_hess, _ = newton_casscf.gen_g_hop(
            mc, mf.mo_coeff, ci0, mc.ao2mo(mf.mo_coeff))
        _pack_ci, _unpack_ci = newton_casscf._pack_ci_get_H(
            mc, mf.mo_coeff, ci0)[-2:]

        def pack_cas(kappa, ci1):
            return np.append(mc.pack_uniq_var(kappa), _pack_ci(ci1))

        def unpack_cas(x):
            return mc.unpack_uniq_var(x[:ugg.nvar_orb]), _unpack_ci(
                x[ugg.nvar_orb:])

        def cas2las(y, mode='hx'):
            yorb, yci = unpack_cas(y)
            yci = [
                2 * (yc - c * c.ravel().dot(yc.ravel()))
                for c, yc in zip(ci0, yci)
            ]
            yorb *= (0.5 if mode == 'hx' else 1)
            return ugg.pack(yorb, [yci])

        def las2cas(y, mode='x'):
            yorb, yci = ugg.unpack(y)
            yci = [
                yc - c * c.ravel().dot(yc.ravel())
                for c, yc in zip(ci0, yci[0])
            ]
            yorb *= (0.5 if mode == 'x' else 1)
            return pack_cas(yorb, yci)

        cas_grad = cas2las(cas_grad)
        self.assertAlmostEqual(lib.fp(las_grad), lib.fp(cas_grad), 8)
        x = np.random.rand(ugg.nvar_tot)
        # orb on input
        x_las = x.copy()
        x_las[ugg.nvar_orb:] = 0.0
        x_cas = las2cas(x_las, mode='x')
        hx_las = las_hess._matvec(x_las)
        hx_cas = cas2las(cas_hess(x_cas), mode='x')
        self.assertAlmostEqual(lib.fp(hx_las), lib.fp(hx_cas), 8)
        # CI on input
        x_las = x.copy()
        x_las[:ugg.nvar_orb] = 0.0
        x_cas = las2cas(x_las, mode='hx')
        hx_las = las_hess._matvec(x_las)
        hx_cas = cas2las(cas_hess(x_cas), mode='hx')
        self.assertAlmostEqual(lib.fp(hx_las), lib.fp(hx_cas), 8)