def makeControlbar1(self):
"""Make composition controlbar."""
# init toolbar
panel = mwx.bgrPanel(self, -1, images.lib['bgrControlbarBorder'], size=(-1, mwx.CONTROLBAR_HEIGHT))
# make controls
formulaMin_label = wx.StaticText(panel, -1, "Minimal formula:")
formulaMin_label.SetFont(wx.SMALL_FONT)
self.formulaMin_value = mwx.formulaCtrl(panel, -1, config.massToFormula['formulaMin'], size=(150, -1))
formulaMax_label = wx.StaticText(panel, -1, "Maximal formula:")
formulaMax_label.SetFont(wx.SMALL_FONT)
self.formulaMax_value = mwx.formulaCtrl(panel, -1, config.massToFormula['formulaMax'], size=(150, -1))
# pack controls
sizer = wx.BoxSizer(wx.HORIZONTAL)
sizer.AddSpacer(mwx.CONTROLBAR_LSPACE)
sizer.Add(formulaMin_label, 0, wx.ALIGN_CENTER_VERTICAL|wx.RIGHT, 5)
sizer.Add(self.formulaMin_value, 1, wx.ALIGN_CENTER_VERTICAL|wx.RIGHT, 5)
sizer.AddSpacer(20)
sizer.Add(formulaMax_label, 0, wx.ALIGN_CENTER_VERTICAL|wx.RIGHT, 5)
sizer.Add(self.formulaMax_value, 1, wx.ALIGN_CENTER_VERTICAL)
sizer.AddSpacer(mwx.CONTROLBAR_RSPACE)
mainSizer = wx.BoxSizer(wx.VERTICAL)
mainSizer.Add(sizer, 1, wx.EXPAND)
mainSizer.Fit(panel)
panel.SetSizer(mainSizer)
return panel
def makeItemEditor(self):
"""Make items editor."""
mainSizer = wx.StaticBoxSizer(wx.StaticBox(self, -1, ""), wx.VERTICAL)
# make elements
itemName_label = wx.StaticText(self, -1, "Name:")
self.itemName_value = wx.TextCtrl(self, -1, "", size=(200, -1))
itemExpression_label = wx.StaticText(self, -1, "Expression:")
self.itemExpression_value = wx.TextCtrl(self, -1, "", size=(200, -1))
itemCTerm_label = wx.StaticText(self, -1, "C-term formula:")
self.itemCTerm_value = mwx.formulaCtrl(self, -1, "", size=(200, -1))
itemNTerm_label = wx.StaticText(self, -1, "N-term formula:")
self.itemNTerm_value = mwx.formulaCtrl(self, -1, "", size=(200, -1))
self.itemModsBefore_check = wx.CheckBox(self, -1, "Allow modification before cut")
self.itemModsAfter_check = wx.CheckBox(self, -1, "Allow modification after cut")
# buttons
add_butt = wx.Button(self, -1, "Add", size=(80,-1))
add_butt.Bind(wx.EVT_BUTTON, self.onAddItem)
delete_butt = wx.Button(self, -1, "Delete", size=(80,-1))
delete_butt.Bind(wx.EVT_BUTTON, self.onDeleteItem)
# pack elements
grid = wx.GridBagSizer(mwx.GRIDBAG_VSPACE, mwx.GRIDBAG_HSPACE)
grid.Add(itemName_label, (0,0), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemName_value, (0,1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemExpression_label, (1,0), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemExpression_value, (1,1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemCTerm_label, (2,0), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemCTerm_value, (2,1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemNTerm_label, (3,0), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemNTerm_value, (3,1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemModsBefore_check, (0,3), flag=wx.ALIGN_LEFT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemModsAfter_check, (1,3), flag=wx.ALIGN_LEFT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(add_butt, (0,7), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(delete_butt, (1,7), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
mainSizer.Add(grid, 0, wx.ALIGN_CENTER|wx.ALL, 10)
return mainSizer
def makeItemEditor(self):
"""Make items editor."""
mainSizer = wx.StaticBoxSizer(wx.StaticBox(self, -1, ""), wx.VERTICAL)
# make elements
itemName_label = wx.StaticText(self, -1, "Name:")
self.itemName_value = wx.TextCtrl(self, -1, "", size=(250, -1))
itemDescription_label = wx.StaticText(self, -1, "Description:")
self.itemDescription_value = wx.TextCtrl(self, -1, "", size=(250, -1))
itemFormula_label = wx.StaticText(self, -1, "Formula:")
self.itemFormula_value = mwx.formulaCtrl(self, -1, "", size=(250, -1))
self.itemFormula_value.Bind(wx.EVT_TEXT, self.onFormulaEdited)
itemMoMass_label = wx.StaticText(self, -1, "Mo. mass:")
self.itemMoMass_value = wx.TextCtrl(self, -1, "", size=(150, -1))
itemMoMass_label.Enable(False)
self.itemMoMass_value.Enable(False)
itemAvMass_label = wx.StaticText(self, -1, "Av. mass:")
self.itemAvMass_value = wx.TextCtrl(self, -1, "", size=(150, -1))
itemAvMass_label.Enable(False)
self.itemAvMass_value.Enable(False)
# buttons
add_butt = wx.Button(self, -1, "Add", size=(80, -1))
add_butt.Bind(wx.EVT_BUTTON, self.onAddItem)
delete_butt = wx.Button(self, -1, "Delete", size=(80, -1))
delete_butt.Bind(wx.EVT_BUTTON, self.onDeleteItem)
# pack elements
grid = wx.GridBagSizer(mwx.GRIDBAG_VSPACE, mwx.GRIDBAG_HSPACE)
grid.Add(itemName_label, (0, 0), flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemName_value, (0, 1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemDescription_label, (1, 0), flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemDescription_value, (1, 1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemFormula_label, (2, 0), flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemFormula_value, (2, 1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemMoMass_label, (0, 3), flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemMoMass_value, (0, 4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemAvMass_label, (1, 3), flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemAvMass_value, (1, 4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(add_butt, (0, 7), flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(delete_butt, (1, 7), flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
mainSizer.Add(grid, 0, wx.ALIGN_CENTER | wx.ALL, 10)
return mainSizer
def makeToolbar(self):
"""Make toolbar."""
# init toolbar
panel = mwx.bgrPanel(self, -1, images.lib['bgrToolbar'], size=(-1, mwx.TOOLBAR_HEIGHT))
# make buttons
self.summary_butt = wx.BitmapButton(panel, ID_massCalculatorSummary, images.lib['massCalculatorSummaryOff'], size=(mwx.TOOLBAR_TOOLSIZE), style=wx.BORDER_NONE)
self.summary_butt.SetToolTip(wx.ToolTip("Compound summary"))
self.summary_butt.Bind(wx.EVT_BUTTON, self.onToolSelected)
self.ionseries_butt = wx.BitmapButton(panel, ID_massCalculatorIonSeries, images.lib['massCalculatorIonSeriesOff'], size=(mwx.TOOLBAR_TOOLSIZE), style=wx.BORDER_NONE)
self.ionseries_butt.SetToolTip(wx.ToolTip("Ion series"))
self.ionseries_butt.Bind(wx.EVT_BUTTON, self.onToolSelected)
self.pattern_butt = wx.BitmapButton(panel, ID_massCalculatorPattern, images.lib['massCalculatorPatternOff'], size=(mwx.TOOLBAR_TOOLSIZE), style=wx.BORDER_NONE)
self.pattern_butt.SetToolTip(wx.ToolTip("Isotopic pattern"))
self.pattern_butt.Bind(wx.EVT_BUTTON, self.onToolSelected)
# make compound fields
compound_label = wx.StaticText(panel, -1, "Formula:")
self.compound_value = mwx.formulaCtrl(panel, -1, "", size=(250, -1), style=wx.TE_PROCESS_ENTER)
compound_label.SetFont(wx.SMALL_FONT)
self.compound_value.Bind(wx.EVT_TEXT, self.onCompoundChanged)
self.compound_value.Bind(wx.EVT_TEXT_ENTER, self.onCompoundChanged)
# make save button
self.save_butt = wx.Button(panel, -1, "Save", size=(-1, mwx.SMALL_BUTTON_HEIGHT))
self.save_butt.Bind(wx.EVT_BUTTON, self.onSave)
# pack elements
self.toolbar = wx.BoxSizer(wx.HORIZONTAL)
self.toolbar.AddSpacer(mwx.TOOLBAR_LSPACE)
self.toolbar.Add(self.summary_butt, 0, wx.ALIGN_CENTER_VERTICAL)
self.toolbar.Add(self.ionseries_butt, 0, wx.ALIGN_CENTER_VERTICAL|wx.LEFT, mwx.BUTTON_SIZE_CORRECTION)
self.toolbar.Add(self.pattern_butt, 0, wx.ALIGN_CENTER_VERTICAL|wx.LEFT, mwx.BUTTON_SIZE_CORRECTION)
self.toolbar.AddSpacer(20)
self.toolbar.Add(compound_label, 0, wx.ALIGN_CENTER_VERTICAL|wx.RIGHT, 5)
self.toolbar.Add(self.compound_value, 1, wx.ALIGN_CENTER_VERTICAL)
self.toolbar.AddSpacer(20)
self.toolbar.Add(self.save_butt, 0, wx.ALIGN_CENTER_VERTICAL)
self.toolbar.AddSpacer(mwx.TOOLBAR_RSPACE)
mainSizer = wx.BoxSizer(wx.VERTICAL)
mainSizer.Add(self.toolbar, 1, wx.EXPAND)
panel.SetSizer(mainSizer)
mainSizer.Fit(panel)
return panel
def makeToolbar(self):
"""Make toolbar."""
# init toolbar
panel = mwx.bgrPanel(self,
-1,
images.lib['bgrToolbar'],
size=(-1, mwx.TOOLBAR_HEIGHT))
# make tools
yAxis_label = wx.StaticText(panel, -1, "MD type:")
yAxis_label.SetFont(wx.SMALL_FONT)
choices = [
'Fractional Mass', 'Mass Defect', 'Relative Mass Defect',
'Kendrick Mass Defect'
]
self.yAxis_choice = wx.Choice(panel,
-1,
choices=choices,
size=(175, mwx.SMALL_CHOICE_HEIGHT))
self.yAxis_choice.Select(1)
choices = ['fraction', 'standard', 'relative', 'kendrick']
if config.massDefectPlot['yAxis'] in choices:
self.yAxis_choice.Select(
choices.index(config.massDefectPlot['yAxis']))
self.yAxis_choice.Bind(wx.EVT_CHOICE, self.onAxisChanged)
nominalMass_label = wx.StaticText(panel, -1, "Nominal mass:")
nominalMass_label.SetFont(wx.SMALL_FONT)
choices = ['Ceil', 'Round', 'Floor']
self.nominalMass_choice = wx.Choice(panel,
-1,
choices=choices,
size=(80, mwx.SMALL_CHOICE_HEIGHT))
self.nominalMass_choice.Select(1)
if config.massDefectPlot['nominalMass'].title() in choices:
self.nominalMass_choice.Select(
choices.index(config.massDefectPlot['nominalMass'].title()))
kendrickFormula_label = wx.StaticText(panel, -1, "Kendrick formula:")
kendrickFormula_label.SetFont(wx.SMALL_FONT)
self.kendrickFormula_value = mwx.formulaCtrl(
panel, -1, config.massDefectPlot['kendrickFormula'], size=(80, -1))
# make buttons
self.plot_butt = wx.Button(panel,
-1,
"Plot",
size=(-1, mwx.SMALL_BUTTON_HEIGHT))
self.plot_butt.Bind(wx.EVT_BUTTON, self.onPlot)
self.onAxisChanged()
# pack elements
sizer = wx.BoxSizer(wx.HORIZONTAL)
sizer.AddSpacer(mwx.CONTROLBAR_LSPACE)
sizer.Add(yAxis_label, 0, wx.ALIGN_CENTER_VERTICAL | wx.RIGHT, 5)
sizer.Add(self.yAxis_choice, 0, wx.ALIGN_CENTER_VERTICAL)
sizer.AddSpacer(20)
sizer.Add(nominalMass_label, 0, wx.ALIGN_CENTER_VERTICAL | wx.RIGHT, 5)
sizer.Add(self.nominalMass_choice, 0, wx.ALIGN_CENTER_VERTICAL)
sizer.AddSpacer(20)
sizer.Add(kendrickFormula_label, 0,
wx.ALIGN_CENTER_VERTICAL | wx.RIGHT, 5)
sizer.Add(self.kendrickFormula_value, 0, wx.ALIGN_CENTER_VERTICAL)
sizer.AddStretchSpacer()
sizer.AddSpacer(20)
sizer.Add(self.plot_butt, 0, wx.ALIGN_CENTER_VERTICAL)
sizer.AddSpacer(mwx.TOOLBAR_RSPACE)
mainSizer = wx.BoxSizer(wx.VERTICAL)
mainSizer.Add(sizer, 1, wx.EXPAND)
panel.SetSizer(mainSizer)
mainSizer.Fit(panel)
return panel
def makeItemEditor(self):
"""Make items editor."""
mainSizer = wx.StaticBoxSizer(wx.StaticBox(self, -1, ""), wx.VERTICAL)
# make elements
itemName_label = wx.StaticText(self, -1, "Name:")
self.itemName_value = wx.TextCtrl(self, -1, "", size=(250, -1))
itemDescription_label = wx.StaticText(self, -1, "Description:")
self.itemDescription_value = wx.TextCtrl(self, -1, "", size=(250, -1))
itemFormula_label = wx.StaticText(self, -1, "Formula:")
self.itemFormula_value = mwx.formulaCtrl(self, -1, "", size=(250, -1))
self.itemFormula_value.Bind(wx.EVT_TEXT, self.onFormulaEdited)
itemMoMass_label = wx.StaticText(self, -1, "Mo. mass:")
self.itemMoMass_value = wx.TextCtrl(self, -1, "", size=(150, -1))
itemMoMass_label.Enable(False)
self.itemMoMass_value.Enable(False)
itemAvMass_label = wx.StaticText(self, -1, "Av. mass:")
self.itemAvMass_value = wx.TextCtrl(self, -1, "", size=(150, -1))
itemAvMass_label.Enable(False)
self.itemAvMass_value.Enable(False)
# buttons
add_butt = wx.Button(self, -1, "Add", size=(80, -1))
add_butt.Bind(wx.EVT_BUTTON, self.onAddItem)
delete_butt = wx.Button(self, -1, "Delete", size=(80, -1))
delete_butt.Bind(wx.EVT_BUTTON, self.onDeleteItem)
# pack elements
grid = wx.GridBagSizer(mwx.GRIDBAG_VSPACE, mwx.GRIDBAG_HSPACE)
grid.Add(itemName_label, (0, 0),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemName_value, (0, 1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemDescription_label, (1, 0),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemDescription_value, (1, 1),
flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemFormula_label, (2, 0),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemFormula_value, (2, 1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemMoMass_label, (0, 3),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemMoMass_value, (0, 4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemAvMass_label, (1, 3),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemAvMass_value, (1, 4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(add_butt, (0, 7),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(delete_butt, (1, 7),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
mainSizer.Add(grid, 0, wx.ALIGN_CENTER | wx.ALL, 10)
return mainSizer
def makeItemEditor(self):
"""Make items editor."""
mainSizer = wx.StaticBoxSizer(wx.StaticBox(self, -1, ""), wx.VERTICAL)
# make elements
itemSearch_label = wx.StaticText(self, -1, "Search:")
self.itemSearch_value = wx.TextCtrl(self, -1, "", size=(200, -1), style=wx.TE_PROCESS_ENTER)
self.itemSearch_value.Bind(wx.EVT_TEXT, self.onSearch)
itemAbbr_label = wx.StaticText(self, -1, "Abbr.:")
self.itemAbbr_value = wx.TextCtrl(self, -1, "", size=(200, -1))
itemName_label = wx.StaticText(self, -1, "Name:")
self.itemName_value = wx.TextCtrl(self, -1, "", size=(200, -1))
itemCategory_label = wx.StaticText(self, -1, "Category:")
self.itemCategory_value = wx.TextCtrl(self, -1, "", size=(200, -1))
itemFormula_label = wx.StaticText(self, -1, "Formula:")
self.itemFormula_value = mwx.formulaCtrl(self, -1, "", size=(150, -1))
self.itemFormula_value.Bind(wx.EVT_TEXT, self.onFormulaEdited)
itemMoMass_label = wx.StaticText(self, -1, "Mo. mass:")
self.itemMoMass_value = wx.TextCtrl(self, -1, "", size=(150, -1))
itemMoMass_label.Enable(False)
self.itemMoMass_value.Enable(False)
itemAvMass_label = wx.StaticText(self, -1, "Av. mass:")
self.itemAvMass_value = wx.TextCtrl(self, -1, "", size=(150, -1))
itemAvMass_label.Enable(False)
self.itemAvMass_value.Enable(False)
itemLossMoMass_label = wx.StaticText(self, -1, "Mo. loss mass:")
self.itemLossMoMass_value = wx.TextCtrl(self, -1, "", size=(150, -1))
itemLossMoMass_label.Enable(False)
self.itemLossMoMass_value.Enable(False)
itemLosses_label = wx.StaticText(self, -1, "Losses:")
self.itemLosses_values = []
for x in range(4):
item = mwx.formulaCtrl(self, -1, "", size=(100, -1))
item.Bind(wx.EVT_TEXT, self.onLossFormula)
item.Bind(wx.EVT_SET_FOCUS, self.onLossFormula)
item.Bind(wx.EVT_KILL_FOCUS, self.onLossFormula)
self.itemLosses_values.append(item)
# buttons
add_butt = wx.Button(self, -1, "Add", size=(80,-1))
add_butt.Bind(wx.EVT_BUTTON, self.onAddItem)
delete_butt = wx.Button(self, -1, "Delete", size=(80,-1))
delete_butt.Bind(wx.EVT_BUTTON, self.onDeleteItem)
# pack elements
grid = wx.GridBagSizer(mwx.GRIDBAG_VSPACE, mwx.GRIDBAG_HSPACE)
grid.Add(itemSearch_label, (0,0), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemSearch_value, (0,1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemAbbr_label, (1,0), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemAbbr_value, (1,1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemName_label, (2,0), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemName_value, (2,1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemCategory_label, (3,0), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemCategory_value, (3,1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemFormula_label, (0,3), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemFormula_value, (0,4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemMoMass_label, (1,3), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemMoMass_value, (1,4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemAvMass_label, (2,3), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemAvMass_value, (2,4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemLossMoMass_label, (3,3), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemLossMoMass_value, (3,4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemLosses_label, (0,6), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemLosses_values[0], (0,7), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemLosses_values[1], (1,7), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemLosses_values[2], (2,7), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemLosses_values[3], (3,7), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(add_butt, (0,10), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(delete_butt, (1,10), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
mainSizer.Add(grid, 0, wx.ALIGN_CENTER|wx.ALL, 10)
return mainSizer
def makeToolbar(self):
"""Make toolbar."""
# init toolbar
panel = mwx.bgrPanel(self, -1, images.lib["bgrToolbar"], size=(-1, mwx.TOOLBAR_HEIGHT))
# make elements
formula_label = wx.StaticText(panel, -1, "Formula:")
formula_label.SetFont(wx.SMALL_FONT)
self.formula_value = mwx.formulaCtrl(panel, -1, "", size=(220, -1))
charge_label = wx.StaticText(panel, -1, "Charge:")
charge_label.SetFont(wx.SMALL_FONT)
self.charge_value = wx.TextCtrl(
panel, -1, str(config.envelopeFit["charge"]), size=(35, -1), validator=mwx.validator("int")
)
exchange_label = wx.StaticText(panel, -1, "Exchange:")
exchange_label.SetFont(wx.SMALL_FONT)
self.exchangeLoss_value = mwx.formulaCtrl(panel, -1, str(config.envelopeFit["loss"]), size=(60, -1))
exchangeVs_label = wx.StaticText(panel, -1, " vs.")
exchangeVs_label.SetFont(wx.SMALL_FONT)
self.exchangeGain_value = mwx.formulaCtrl(panel, -1, str(config.envelopeFit["gain"]), size=(60, -1))
scale_label = wx.StaticText(panel, -1, "Range:")
scale_label.SetFont(wx.SMALL_FONT)
scaleDash_label = wx.StaticText(panel, -1, "-")
scaleDash_label.SetFont(wx.SMALL_FONT)
self.scaleMin_value = wx.TextCtrl(
panel, -1, str(config.envelopeFit["scaleMin"]), size=(35, -1), validator=mwx.validator("intPos")
)
self.scaleMax_value = wx.TextCtrl(
panel, -1, str(config.envelopeFit["scaleMax"]), size=(35, -1), validator=mwx.validator("intPos")
)
self.calculate_butt = wx.Button(panel, -1, "Calculate", size=(-1, mwx.SMALL_BUTTON_HEIGHT))
self.calculate_butt.Bind(wx.EVT_BUTTON, self.onCalculate)
# pack elements
sizer = wx.BoxSizer(wx.HORIZONTAL)
sizer.AddSpacer(mwx.CONTROLBAR_LSPACE)
sizer.Add(formula_label, 0, wx.ALIGN_CENTER_VERTICAL | wx.RIGHT, 5)
sizer.Add(self.formula_value, 0, wx.ALIGN_CENTER_VERTICAL)
sizer.AddSpacer(20)
sizer.Add(charge_label, 0, wx.ALIGN_CENTER_VERTICAL | wx.RIGHT, 5)
sizer.Add(self.charge_value, 0, wx.ALIGN_CENTER_VERTICAL)
sizer.AddSpacer(20)
sizer.Add(exchange_label, 0, wx.ALIGN_CENTER_VERTICAL | wx.RIGHT, 5)
sizer.Add(self.exchangeLoss_value, 0, wx.ALIGN_CENTER_VERTICAL | wx.RIGHT, 5)
sizer.Add(exchangeVs_label, 0, wx.ALIGN_CENTER_VERTICAL | wx.RIGHT, 5)
sizer.Add(self.exchangeGain_value, 0, wx.ALIGN_CENTER_VERTICAL)
sizer.AddSpacer(20)
sizer.Add(scale_label, 0, wx.ALIGN_CENTER_VERTICAL | wx.RIGHT, 5)
sizer.Add(self.scaleMin_value, 0, wx.ALIGN_CENTER_VERTICAL | wx.RIGHT, 5)
sizer.Add(scaleDash_label, 0, wx.ALIGN_CENTER_VERTICAL | wx.RIGHT, 5)
sizer.Add(self.scaleMax_value, 0, wx.ALIGN_CENTER_VERTICAL)
sizer.AddStretchSpacer()
sizer.AddSpacer(20)
sizer.Add(self.calculate_butt, 0, wx.ALIGN_CENTER_VERTICAL)
sizer.AddSpacer(mwx.CONTROLBAR_RSPACE)
mainSizer = wx.BoxSizer(wx.VERTICAL)
mainSizer.Add(sizer, 1, wx.EXPAND)
mainSizer.Fit(panel)
panel.SetSizer(mainSizer)
return panel
def makeToolbar(self):
"""Make toolbar."""
# init toolbar
panel = mwx.bgrPanel(self,
-1,
images.lib['bgrToolbar'],
size=(-1, mwx.TOOLBAR_HEIGHT))
# make buttons
self.summary_butt = wx.BitmapButton(
panel,
ID_massCalculatorSummary,
images.lib['massCalculatorSummaryOff'],
size=(mwx.TOOLBAR_TOOLSIZE),
style=wx.BORDER_NONE)
self.summary_butt.SetToolTip(wx.ToolTip("Compound summary"))
self.summary_butt.Bind(wx.EVT_BUTTON, self.onToolSelected)
self.ionseries_butt = wx.BitmapButton(
panel,
ID_massCalculatorIonSeries,
images.lib['massCalculatorIonSeriesOff'],
size=(mwx.TOOLBAR_TOOLSIZE),
style=wx.BORDER_NONE)
self.ionseries_butt.SetToolTip(wx.ToolTip("Ion series"))
self.ionseries_butt.Bind(wx.EVT_BUTTON, self.onToolSelected)
self.pattern_butt = wx.BitmapButton(
panel,
ID_massCalculatorPattern,
images.lib['massCalculatorPatternOff'],
size=(mwx.TOOLBAR_TOOLSIZE),
style=wx.BORDER_NONE)
self.pattern_butt.SetToolTip(wx.ToolTip("Isotopic pattern"))
self.pattern_butt.Bind(wx.EVT_BUTTON, self.onToolSelected)
# make compound fields
compound_label = wx.StaticText(panel, -1, "Formula:")
self.compound_value = mwx.formulaCtrl(panel,
-1,
"",
size=(250, -1),
style=wx.TE_PROCESS_ENTER)
compound_label.SetFont(wx.SMALL_FONT)
self.compound_value.Bind(wx.EVT_TEXT, self.onCompoundChanged)
self.compound_value.Bind(wx.EVT_TEXT_ENTER, self.onCompoundChanged)
# make save button
self.save_butt = wx.Button(panel,
-1,
"Save",
size=(-1, mwx.SMALL_BUTTON_HEIGHT))
self.save_butt.Bind(wx.EVT_BUTTON, self.onSave)
# pack elements
self.toolbar = wx.BoxSizer(wx.HORIZONTAL)
self.toolbar.AddSpacer(mwx.TOOLBAR_LSPACE)
self.toolbar.Add(self.summary_butt, 0, wx.ALIGN_CENTER_VERTICAL)
self.toolbar.Add(self.ionseries_butt, 0,
wx.ALIGN_CENTER_VERTICAL | wx.LEFT,
mwx.BUTTON_SIZE_CORRECTION)
self.toolbar.Add(self.pattern_butt, 0,
wx.ALIGN_CENTER_VERTICAL | wx.LEFT,
mwx.BUTTON_SIZE_CORRECTION)
self.toolbar.AddSpacer(20)
self.toolbar.Add(compound_label, 0,
wx.ALIGN_CENTER_VERTICAL | wx.RIGHT, 5)
self.toolbar.Add(self.compound_value, 1, wx.ALIGN_CENTER_VERTICAL)
self.toolbar.AddSpacer(20)
self.toolbar.Add(self.save_butt, 0, wx.ALIGN_CENTER_VERTICAL)
self.toolbar.AddSpacer(mwx.TOOLBAR_RSPACE)
mainSizer = wx.BoxSizer(wx.VERTICAL)
mainSizer.Add(self.toolbar, 1, wx.EXPAND)
panel.SetSizer(mainSizer)
mainSizer.Fit(panel)
return panel
def makeItemEditor(self):
"""Make items editor."""
mainSizer = wx.StaticBoxSizer(wx.StaticBox(self, -1, ""), wx.VERTICAL)
# make elements
itemSearch_label = wx.StaticText(self, -1, "Search:")
self.itemSearch_value = wx.TextCtrl(self,
-1,
"",
size=(200, -1),
style=wx.TE_PROCESS_ENTER)
self.itemSearch_value.Bind(wx.EVT_TEXT, self.onSearch)
itemAbbr_label = wx.StaticText(self, -1, "Abbr.:")
self.itemAbbr_value = wx.TextCtrl(self, -1, "", size=(200, -1))
itemName_label = wx.StaticText(self, -1, "Name:")
self.itemName_value = wx.TextCtrl(self, -1, "", size=(200, -1))
itemCategory_label = wx.StaticText(self, -1, "Category:")
self.itemCategory_value = wx.TextCtrl(self, -1, "", size=(200, -1))
itemFormula_label = wx.StaticText(self, -1, "Formula:")
self.itemFormula_value = mwx.formulaCtrl(self, -1, "", size=(150, -1))
self.itemFormula_value.Bind(wx.EVT_TEXT, self.onFormulaEdited)
itemMoMass_label = wx.StaticText(self, -1, "Mo. mass:")
self.itemMoMass_value = wx.TextCtrl(self, -1, "", size=(150, -1))
itemMoMass_label.Enable(False)
self.itemMoMass_value.Enable(False)
itemAvMass_label = wx.StaticText(self, -1, "Av. mass:")
self.itemAvMass_value = wx.TextCtrl(self, -1, "", size=(150, -1))
itemAvMass_label.Enable(False)
self.itemAvMass_value.Enable(False)
itemLossMoMass_label = wx.StaticText(self, -1, "Mo. loss mass:")
self.itemLossMoMass_value = wx.TextCtrl(self, -1, "", size=(150, -1))
itemLossMoMass_label.Enable(False)
self.itemLossMoMass_value.Enable(False)
itemLosses_label = wx.StaticText(self, -1, "Losses:")
self.itemLosses_values = []
for x in range(4):
item = mwx.formulaCtrl(self, -1, "", size=(100, -1))
item.Bind(wx.EVT_TEXT, self.onLossFormula)
item.Bind(wx.EVT_SET_FOCUS, self.onLossFormula)
item.Bind(wx.EVT_KILL_FOCUS, self.onLossFormula)
self.itemLosses_values.append(item)
# buttons
add_butt = wx.Button(self, -1, "Add", size=(80, -1))
add_butt.Bind(wx.EVT_BUTTON, self.onAddItem)
delete_butt = wx.Button(self, -1, "Delete", size=(80, -1))
delete_butt.Bind(wx.EVT_BUTTON, self.onDeleteItem)
# pack elements
grid = wx.GridBagSizer(mwx.GRIDBAG_VSPACE, mwx.GRIDBAG_HSPACE)
grid.Add(itemSearch_label, (0, 0),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemSearch_value, (0, 1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemAbbr_label, (1, 0),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemAbbr_value, (1, 1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemName_label, (2, 0),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemName_value, (2, 1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemCategory_label, (3, 0),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemCategory_value, (3, 1),
flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemFormula_label, (0, 3),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemFormula_value, (0, 4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemMoMass_label, (1, 3),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemMoMass_value, (1, 4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemAvMass_label, (2, 3),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemAvMass_value, (2, 4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemLossMoMass_label, (3, 3),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemLossMoMass_value, (3, 4),
flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemLosses_label, (0, 6),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemLosses_values[0], (0, 7),
flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemLosses_values[1], (1, 7),
flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemLosses_values[2], (2, 7),
flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemLosses_values[3], (3, 7),
flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(add_butt, (0, 10),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(delete_butt, (1, 10),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
mainSizer.Add(grid, 0, wx.ALIGN_CENTER | wx.ALL, 10)
return mainSizer
def makeItemEditor(self):
"""Make items editor."""
mainSizer = wx.StaticBoxSizer(wx.StaticBox(self, -1, ""), wx.VERTICAL)
# make elements
itemName_label = wx.StaticText(self, -1, "Name:")
self.itemName_value = wx.TextCtrl(self, -1, "", size=(250, -1))
itemDescription_label = wx.StaticText(self, -1, "Description:")
self.itemDescription_value = wx.TextCtrl(self, -1, "", size=(250, -1))
itemAminoSpecifity_label = wx.StaticText(self, -1, "Amino specifity:")
self.itemAminoSpecifity_value = wx.TextCtrl(self,
-1,
"",
size=(250, -1))
itemTermSpecifity_label = wx.StaticText(self, -1,
"Terminal specifity:")
self.itemTermSpecifity_choice = wx.Choice(
self,
-1,
choices=['None', 'N-terminus', 'C-terminus'],
size=(250, mwx.CHOICE_HEIGHT))
self.itemTermSpecifity_choice.SetStringSelection('None')
itemGainFormula_label = wx.StaticText(self, -1, "Gain formula:")
self.itemGainFormula_value = mwx.formulaCtrl(self,
-1,
"",
size=(150, -1))
self.itemGainFormula_value.Bind(wx.EVT_TEXT, self.onFormulaEdited)
itemLossFormula_label = wx.StaticText(self, -1, "Loss formula:")
self.itemLossFormula_value = mwx.formulaCtrl(self,
-1,
"",
size=(150, -1))
self.itemLossFormula_value.Bind(wx.EVT_TEXT, self.onFormulaEdited)
itemMoMass_label = wx.StaticText(self, -1, "Mo. mass:")
self.itemMoMass_value = wx.TextCtrl(self, -1, "", size=(150, -1))
itemMoMass_label.Enable(False)
self.itemMoMass_value.Enable(False)
itemAvMass_label = wx.StaticText(self, -1, "Av. mass:")
self.itemAvMass_value = wx.TextCtrl(self, -1, "", size=(150, -1))
itemAvMass_label.Enable(False)
self.itemAvMass_value.Enable(False)
# buttons
add_butt = wx.Button(self, -1, "Add", size=(80, -1))
add_butt.Bind(wx.EVT_BUTTON, self.onAddItem)
delete_butt = wx.Button(self, -1, "Delete", size=(80, -1))
delete_butt.Bind(wx.EVT_BUTTON, self.onDeleteItem)
# pack elements
grid = wx.GridBagSizer(mwx.GRIDBAG_VSPACE, mwx.GRIDBAG_HSPACE)
grid.Add(itemName_label, (0, 0),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemName_value, (0, 1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemDescription_label, (1, 0),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemDescription_value, (1, 1),
flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemAminoSpecifity_label, (2, 0),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemAminoSpecifity_value, (2, 1),
flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemTermSpecifity_label, (3, 0),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemTermSpecifity_choice, (3, 1),
flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemGainFormula_label, (0, 3),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemGainFormula_value, (0, 4),
flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemLossFormula_label, (1, 3),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemLossFormula_value, (1, 4),
flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemMoMass_label, (2, 3),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemMoMass_value, (2, 4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemAvMass_label, (3, 3),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemAvMass_value, (3, 4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(add_butt, (0, 7),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(delete_butt, (1, 7),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
mainSizer.Add(grid, 0, wx.ALIGN_CENTER | wx.ALL, 10)
return mainSizer
def makeItemEditor(self):
"""Make items editor."""
mainSizer = wx.StaticBoxSizer(wx.StaticBox(self, -1, ""), wx.VERTICAL)
# make elements
itemName_label = wx.StaticText(self, -1, "Name:")
self.itemName_value = wx.TextCtrl(self, -1, "", size=(250, -1))
itemDescription_label = wx.StaticText(self, -1, "Description:")
self.itemDescription_value = wx.TextCtrl(self, -1, "", size=(250, -1))
itemAminoSpecifity_label = wx.StaticText(self, -1, "Amino specifity:")
self.itemAminoSpecifity_value = wx.TextCtrl(self, -1, "", size=(250, -1))
itemTermSpecifity_label = wx.StaticText(self, -1, "Terminal specifity:")
self.itemTermSpecifity_choice = wx.Choice(self, -1, choices=['None','N-terminus','C-terminus'], size=(250, mwx.CHOICE_HEIGHT))
self.itemTermSpecifity_choice.SetStringSelection('None')
itemGainFormula_label = wx.StaticText(self, -1, "Gain formula:")
self.itemGainFormula_value = mwx.formulaCtrl(self, -1, "", size=(150, -1))
self.itemGainFormula_value.Bind(wx.EVT_TEXT, self.onFormulaEdited)
itemLossFormula_label = wx.StaticText(self, -1, "Loss formula:")
self.itemLossFormula_value = mwx.formulaCtrl(self, -1, "", size=(150, -1))
self.itemLossFormula_value.Bind(wx.EVT_TEXT, self.onFormulaEdited)
itemMoMass_label = wx.StaticText(self, -1, "Mo. mass:")
self.itemMoMass_value = wx.TextCtrl(self, -1, "", size=(150, -1))
itemMoMass_label.Enable(False)
self.itemMoMass_value.Enable(False)
itemAvMass_label = wx.StaticText(self, -1, "Av. mass:")
self.itemAvMass_value = wx.TextCtrl(self, -1, "", size=(150, -1))
itemAvMass_label.Enable(False)
self.itemAvMass_value.Enable(False)
# buttons
add_butt = wx.Button(self, -1, "Add", size=(80,-1))
add_butt.Bind(wx.EVT_BUTTON, self.onAddItem)
delete_butt = wx.Button(self, -1, "Delete", size=(80,-1))
delete_butt.Bind(wx.EVT_BUTTON, self.onDeleteItem)
# pack elements
grid = wx.GridBagSizer(mwx.GRIDBAG_VSPACE, mwx.GRIDBAG_HSPACE)
grid.Add(itemName_label, (0,0), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemName_value, (0,1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemDescription_label, (1,0), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemDescription_value, (1,1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemAminoSpecifity_label, (2,0), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemAminoSpecifity_value, (2,1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemTermSpecifity_label, (3,0), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemTermSpecifity_choice, (3,1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemGainFormula_label, (0,3), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemGainFormula_value, (0,4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemLossFormula_label, (1,3), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemLossFormula_value, (1,4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemMoMass_label, (2,3), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemMoMass_value, (2,4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemAvMass_label, (3,3), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemAvMass_value, (3,4), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(add_butt, (0,7), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
grid.Add(delete_butt, (1,7), flag=wx.ALIGN_RIGHT|wx.ALIGN_CENTER_VERTICAL)
mainSizer.Add(grid, 0, wx.ALIGN_CENTER|wx.ALL, 10)
return mainSizer
def makeGUI(self):
"""Make GUI elements."""
labelBox = wx.StaticBoxSizer(wx.StaticBox(self, -1, ""), wx.HORIZONTAL)
formulaBox = wx.StaticBoxSizer(wx.StaticBox(self, -1, ""), wx.HORIZONTAL)
# make elements
label_label = wx.StaticText(self, -1, "Label:", style=wx.ALIGN_RIGHT)
self.label_value = wx.TextCtrl(self, -1, '', size=(300,-1), style=wx.TE_PROCESS_ENTER)
self.label_value.Bind(wx.EVT_TEXT_ENTER, self.onOK)
formula_label = wx.StaticText(self, -1, "Formula:", style=wx.ALIGN_RIGHT)
self.formula_value = mwx.formulaCtrl(self, -1, '', size=(300,-1), style=wx.TE_PROCESS_ENTER)
self.formula_value.Bind(wx.EVT_TEXT, self.onFormula)
self.formula_value.Bind(wx.EVT_TEXT_ENTER, self.onOK)
theoreticalMZ_label = wx.StaticText(self, -1, "Theoretical m/z:", style=wx.ALIGN_RIGHT)
self.theoreticalMZ_value = wx.TextCtrl(self, -1, '', size=(120,-1), style=wx.TE_PROCESS_ENTER, validator=mwx.validator('float'))
self.theoreticalMZ_value.Bind(wx.EVT_TEXT_ENTER, self.onOK)
charge_label = wx.StaticText(self, -1, " z:")
self.charge_value = wx.TextCtrl(self, -1, '', size=(30,-1), style=wx.TE_PROCESS_ENTER, validator=mwx.validator('int'))
self.charge_value.Bind(wx.EVT_TEXT, self.onFormula)
self.charge_value.Bind(wx.EVT_TEXT_ENTER, self.onOK)
self.radical_check = wx.CheckBox(self, -1, "M*", size=(50,-1))
self.radical_check.Bind(wx.EVT_CHECKBOX, self.onMassType)
self.mzByUser_radio = wx.RadioButton(self, -1, "Manual", style=wx.RB_GROUP)
self.mzByUser_radio.SetFont(wx.SMALL_FONT)
self.mzByUser_radio.Bind(wx.EVT_RADIOBUTTON, self.onMassType)
self.mzByUser_radio.SetValue(True)
self.mzByFormulaMo_radio = wx.RadioButton(self, -1, "Mo")
self.mzByFormulaMo_radio.SetFont(wx.SMALL_FONT)
self.mzByFormulaMo_radio.Bind(wx.EVT_RADIOBUTTON, self.onMassType)
self.mzByFormulaAv_radio = wx.RadioButton(self, -1, "Av")
self.mzByFormulaAv_radio.SetFont(wx.SMALL_FONT)
self.mzByFormulaAv_radio.Bind(wx.EVT_RADIOBUTTON, self.onMassType)
buttons = self.makeButtons()
# pack elements
labelBox.Add(label_label, 0, wx.ALL|wx.ALIGN_CENTER_VERTICAL, 5)
labelBox.Add(self.label_value, 1, wx.TOP|wx.RIGHT|wx.BOTTOM|wx.ALIGN_CENTER_VERTICAL, 10)
formulaGrid = wx.GridBagSizer(mwx.GRIDBAG_VSPACE, mwx.GRIDBAG_HSPACE)
formulaGrid.Add(formula_label, (0,0), flag=wx.ALIGN_CENTER_VERTICAL|wx.ALIGN_RIGHT)
formulaGrid.Add(self.formula_value, (0,1), (1,7), flag=wx.EXPAND)
formulaGrid.Add(theoreticalMZ_label, (1,0), flag=wx.ALIGN_CENTER_VERTICAL|wx.ALIGN_RIGHT)
formulaGrid.Add(self.theoreticalMZ_value, (1,1))
formulaGrid.Add(charge_label, (1,2), flag=wx.ALIGN_CENTER_VERTICAL|wx.ALIGN_RIGHT)
formulaGrid.Add(self.charge_value, (1,3))
formulaGrid.Add(self.radical_check, (1,4), flag=wx.ALIGN_CENTER_VERTICAL)
formulaGrid.Add(self.mzByUser_radio, (1,5), flag=wx.ALIGN_CENTER_VERTICAL)
formulaGrid.Add(self.mzByFormulaMo_radio, (1,6), flag=wx.ALIGN_CENTER_VERTICAL)
formulaGrid.Add(self.mzByFormulaAv_radio, (1,7), flag=wx.ALIGN_CENTER_VERTICAL)
formulaGrid.AddGrowableCol(1)
formulaBox.Add(formulaGrid, 1, wx.EXPAND|wx.ALL, 10)
mainSizer = wx.BoxSizer(wx.VERTICAL)
mainSizer.Add(labelBox, 0, wx.EXPAND|wx.CENTER|wx.ALL, mwx.PANEL_SPACE_MAIN)
mainSizer.Add(formulaBox, 0, wx.EXPAND|wx.CENTER|wx.LEFT|wx.RIGHT|wx.BOTTOM, mwx.PANEL_SPACE_MAIN)
mainSizer.Add(buttons, 0, wx.CENTER|wx.LEFT|wx.RIGHT|wx.BOTTOM, mwx.PANEL_SPACE_MAIN)
return mainSizer
def makeToolbar(self):
"""Make toolbar."""
# init toolbar
panel = mwx.bgrPanel(self, -1, images.lib['bgrToolbar'], size=(-1, mwx.TOOLBAR_HEIGHT))
# make elements
formula_label = wx.StaticText(panel, -1, "Formula:")
formula_label.SetFont(wx.SMALL_FONT)
self.formula_value = mwx.formulaCtrl(panel, -1, "", size=(220, -1))
charge_label = wx.StaticText(panel, -1, "Charge:")
charge_label.SetFont(wx.SMALL_FONT)
self.charge_value = wx.TextCtrl(panel, -1, str(config.envelopeFit['charge']), size=(35, -1), validator=mwx.validator('int'))
exchange_label = wx.StaticText(panel, -1, "Exchange:")
exchange_label.SetFont(wx.SMALL_FONT)
self.exchangeLoss_value = mwx.formulaCtrl(panel, -1, str(config.envelopeFit['loss']), size=(60, -1))
exchangeVs_label = wx.StaticText(panel, -1, " vs.")
exchangeVs_label.SetFont(wx.SMALL_FONT)
self.exchangeGain_value = mwx.formulaCtrl(panel, -1, str(config.envelopeFit['gain']), size=(60, -1))
scale_label = wx.StaticText(panel, -1, "Range:")
scale_label.SetFont(wx.SMALL_FONT)
scaleDash_label = wx.StaticText(panel, -1, "-")
scaleDash_label.SetFont(wx.SMALL_FONT)
self.scaleMin_value = wx.TextCtrl(panel, -1, str(config.envelopeFit['scaleMin']), size=(35, -1), validator=mwx.validator('intPos'))
self.scaleMax_value = wx.TextCtrl(panel, -1, str(config.envelopeFit['scaleMax']), size=(35, -1), validator=mwx.validator('intPos'))
self.calculate_butt = wx.Button(panel, -1, "Calculate", size=(-1, mwx.SMALL_BUTTON_HEIGHT))
self.calculate_butt.Bind(wx.EVT_BUTTON, self.onCalculate)
# pack elements
sizer = wx.BoxSizer(wx.HORIZONTAL)
sizer.AddSpacer(mwx.CONTROLBAR_LSPACE)
sizer.Add(formula_label, 0, wx.ALIGN_CENTER_VERTICAL|wx.RIGHT, 5)
sizer.Add(self.formula_value, 0, wx.ALIGN_CENTER_VERTICAL)
sizer.AddSpacer(20)
sizer.Add(charge_label, 0, wx.ALIGN_CENTER_VERTICAL|wx.RIGHT, 5)
sizer.Add(self.charge_value, 0, wx.ALIGN_CENTER_VERTICAL)
sizer.AddSpacer(20)
sizer.Add(exchange_label, 0, wx.ALIGN_CENTER_VERTICAL|wx.RIGHT, 5)
sizer.Add(self.exchangeLoss_value, 0, wx.ALIGN_CENTER_VERTICAL|wx.RIGHT, 5)
sizer.Add(exchangeVs_label, 0, wx.ALIGN_CENTER_VERTICAL|wx.RIGHT, 5)
sizer.Add(self.exchangeGain_value, 0, wx.ALIGN_CENTER_VERTICAL)
sizer.AddSpacer(20)
sizer.Add(scale_label, 0, wx.ALIGN_CENTER_VERTICAL|wx.RIGHT, 5)
sizer.Add(self.scaleMin_value, 0, wx.ALIGN_CENTER_VERTICAL|wx.RIGHT, 5)
sizer.Add(scaleDash_label, 0, wx.ALIGN_CENTER_VERTICAL|wx.RIGHT, 5)
sizer.Add(self.scaleMax_value, 0, wx.ALIGN_CENTER_VERTICAL)
sizer.AddStretchSpacer()
sizer.AddSpacer(20)
sizer.Add(self.calculate_butt, 0, wx.ALIGN_CENTER_VERTICAL)
sizer.AddSpacer(mwx.CONTROLBAR_RSPACE)
mainSizer = wx.BoxSizer(wx.VERTICAL)
mainSizer.Add(sizer, 1, wx.EXPAND)
mainSizer.Fit(panel)
panel.SetSizer(mainSizer)
return panel
def makeItemEditor(self):
"""Make items editor."""
mainSizer = wx.StaticBoxSizer(wx.StaticBox(self, -1, ""), wx.VERTICAL)
# make elements
itemName_label = wx.StaticText(self, -1, "Name:")
self.itemName_value = wx.TextCtrl(self, -1, "", size=(200, -1))
itemExpression_label = wx.StaticText(self, -1, "Expression:")
self.itemExpression_value = wx.TextCtrl(self, -1, "", size=(200, -1))
itemCTerm_label = wx.StaticText(self, -1, "C-term formula:")
self.itemCTerm_value = mwx.formulaCtrl(self, -1, "", size=(200, -1))
itemNTerm_label = wx.StaticText(self, -1, "N-term formula:")
self.itemNTerm_value = mwx.formulaCtrl(self, -1, "", size=(200, -1))
self.itemModsBefore_check = wx.CheckBox(
self, -1, "Allow modification before cut")
self.itemModsAfter_check = wx.CheckBox(self, -1,
"Allow modification after cut")
# buttons
add_butt = wx.Button(self, -1, "Add", size=(80, -1))
add_butt.Bind(wx.EVT_BUTTON, self.onAddItem)
delete_butt = wx.Button(self, -1, "Delete", size=(80, -1))
delete_butt.Bind(wx.EVT_BUTTON, self.onDeleteItem)
# pack elements
grid = wx.GridBagSizer(mwx.GRIDBAG_VSPACE, mwx.GRIDBAG_HSPACE)
grid.Add(itemName_label, (0, 0),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemName_value, (0, 1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemExpression_label, (1, 0),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemExpression_value, (1, 1),
flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemCTerm_label, (2, 0),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemCTerm_value, (2, 1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(itemNTerm_label, (3, 0),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemNTerm_value, (3, 1), flag=wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemModsBefore_check, (0, 3),
flag=wx.ALIGN_LEFT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(self.itemModsAfter_check, (1, 3),
flag=wx.ALIGN_LEFT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(add_butt, (0, 7),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
grid.Add(delete_butt, (1, 7),
flag=wx.ALIGN_RIGHT | wx.ALIGN_CENTER_VERTICAL)
mainSizer.Add(grid, 0, wx.ALIGN_CENTER | wx.ALL, 10)
return mainSizer
