def test_load_repo_data(self):
repo_data = { 'tool_shed_status':
{ 'latest_installable_revision': 'True',
'revision_update': 'False',
'revision_upgrade': 'False',
'repository_deprecated': 'False' },
'status': 'Installed',
'name': 'trimmomatic',
'deleted': False,
'ctx_rev': '2',
'error_message': '',
'installed_changeset_revision': 'a60283899c6d',
'tool_shed': 'toolshed.g2.bx.psu.edu',
'dist_to_shed': False,
'url': '/galaxy_dev/api/tool_shed_repositories/68b273cb7d2d6cff',
'id': '68b273cb7d2d6cff',
'owner': 'pjbriggs',
'uninstalled': False,
'changeset_revision': 'a60283899c6d',
'includes_datatypes': False }
repo = Repository(repo_data)
self.assertEqual(repo.name,'trimmomatic')
self.assertEqual(repo.owner,'pjbriggs')
self.assertEqual(repo.tool_shed,'toolshed.g2.bx.psu.edu')
self.assertEqual(repo.id,
'toolshed.g2.bx.psu.edu/pjbriggs/trimmomatic')
revisions = repo.revisions()
self.assertEqual(len(revisions),1)
self.assertEqual(revisions[0].revision_number,'2')
self.assertEqual(revisions[0].changeset_revision,'a60283899c6d')
self.assertEqual(revisions[0].installed_changeset_revision,
'a60283899c6d')
self.assertEqual(revisions[0].status,'Installed')
self.assertEqual(revisions[0].error_message,'')
self.assertFalse(revisions[0].deleted)
self.assertFalse(revisions[0].revision_update)
self.assertFalse(revisions[0].revision_upgrade)
self.assertTrue(revisions[0].latest_revision)
self.assertEqual(revisions[0].revision_id,'2:a60283899c6d')
def test_load_repo_data(self):
repo_data = { u'tool_shed_status':
{ u'latest_installable_revision': u'True',
u'revision_update': u'False',
u'revision_upgrade': u'False',
u'repository_deprecated': u'False' },
u'status': u'Installed',
u'name': u'trimmomatic',
u'deleted': False,
u'ctx_rev': u'2',
u'error_message': u'',
u'installed_changeset_revision': u'a60283899c6d',
u'tool_shed': u'toolshed.g2.bx.psu.edu',
u'dist_to_shed': False,
u'url': u'/galaxy_dev/api/tool_shed_repositories/68b273cb7d2d6cff',
u'id': u'68b273cb7d2d6cff',
u'owner': u'pjbriggs',
u'uninstalled': False,
u'changeset_revision': u'a60283899c6d',
u'includes_datatypes': False }
repo = Repository(repo_data)
self.assertEqual(repo.name,'trimmomatic')
self.assertEqual(repo.owner,'pjbriggs')
self.assertEqual(repo.tool_shed,'toolshed.g2.bx.psu.edu')
self.assertEqual(repo.id,
'toolshed.g2.bx.psu.edu/pjbriggs/trimmomatic')
revisions = repo.revisions()
self.assertEqual(len(revisions),1)
self.assertEqual(revisions[0].revision_number,'2')
self.assertEqual(revisions[0].changeset_revision,'a60283899c6d')
self.assertEqual(revisions[0].installed_changeset_revision,
'a60283899c6d')
self.assertEqual(revisions[0].status,'Installed')
self.assertEqual(revisions[0].error_message,'')
self.assertFalse(revisions[0].deleted)
self.assertFalse(revisions[0].revision_update)
self.assertFalse(revisions[0].revision_upgrade)
self.assertTrue(revisions[0].latest_revision)
self.assertEqual(revisions[0].revision_id,'2:a60283899c6d')
def test_multiple_revisions(self):
repo_data1 = { 'tool_shed_status':
{ 'latest_installable_revision': 'True',
'revision_update': 'False',
'revision_upgrade': 'False',
'repository_deprecated': 'False' },
'status': 'Installed',
'name': 'trimmomatic',
'deleted': False,
'ctx_rev': '2',
'error_message': '',
'installed_changeset_revision': 'a60283899c6d',
'tool_shed': 'toolshed.g2.bx.psu.edu',
'dist_to_shed': False,
'url': '/galaxy_dev/api/tool_shed_repositories/68b273cb7d2d6cff',
'id': '68b273cb7d2d6cff',
'owner': 'pjbriggs',
'uninstalled': False,
'changeset_revision': 'a60283899c6d',
'includes_datatypes': False }
repo_data2 = { 'tool_shed_status':
{'latest_installable_revision': 'False',
'revision_update': 'False',
'revision_upgrade': 'True',
'repository_deprecated': 'False' },
'status': 'Installed',
'name': 'trimmomatic',
'deleted': False,
'ctx_rev': '1',
'error_message': '',
'installed_changeset_revision': '3358c3d30143',
'tool_shed': 'toolshed.g2.bx.psu.edu',
'dist_to_shed': False,
'url': '/galaxy_dev/api/tool_shed_repositories/d6f760c242aa425c',
'id': 'd6f760c242aa425c',
'owner': 'pjbriggs',
'uninstalled': False,
'changeset_revision': '2bd7cdbb6228',
'includes_datatypes': False}
repo = Repository(repo_data2)
repo.add_revision(repo_data1)
self.assertEqual(repo.name,'trimmomatic')
self.assertEqual(repo.owner,'pjbriggs')
self.assertEqual(repo.tool_shed,'toolshed.g2.bx.psu.edu')
self.assertEqual(repo.id,
'toolshed.g2.bx.psu.edu/pjbriggs/trimmomatic')
revisions = repo.revisions()
# Most recent revision
self.assertEqual(len(revisions),2)
self.assertEqual(revisions[0].revision_number,'2')
self.assertEqual(revisions[0].changeset_revision,'a60283899c6d')
self.assertEqual(revisions[0].installed_changeset_revision,
'a60283899c6d')
self.assertEqual(revisions[0].status,'Installed')
self.assertEqual(revisions[0].error_message,'')
self.assertFalse(revisions[0].deleted)
self.assertFalse(revisions[0].revision_update)
self.assertFalse(revisions[0].revision_upgrade)
self.assertTrue(revisions[0].latest_revision)
self.assertEqual(revisions[0].revision_id,'2:a60283899c6d')
# Previous revision
self.assertEqual(revisions[1].revision_number,'1')
self.assertEqual(revisions[1].changeset_revision,'2bd7cdbb6228')
self.assertEqual(revisions[1].installed_changeset_revision,
'3358c3d30143')
self.assertEqual(revisions[1].status,'Installed')
self.assertEqual(revisions[1].error_message,'')
self.assertFalse(revisions[1].deleted)
self.assertFalse(revisions[1].revision_update)
self.assertTrue(revisions[1].revision_upgrade)
self.assertFalse(revisions[1].latest_revision)
self.assertEqual(revisions[1].revision_id,'1:2bd7cdbb6228')
def test_multiple_revisions(self):
repo_data1 = { u'tool_shed_status':
{ u'latest_installable_revision': u'True',
u'revision_update': u'False',
u'revision_upgrade': u'False',
u'repository_deprecated': u'False' },
u'status': u'Installed',
u'name': u'trimmomatic',
u'deleted': False,
u'ctx_rev': u'2',
u'error_message': u'',
u'installed_changeset_revision': u'a60283899c6d',
u'tool_shed': u'toolshed.g2.bx.psu.edu',
u'dist_to_shed': False,
u'url': u'/galaxy_dev/api/tool_shed_repositories/68b273cb7d2d6cff',
u'id': u'68b273cb7d2d6cff',
u'owner': u'pjbriggs',
u'uninstalled': False,
u'changeset_revision': u'a60283899c6d',
u'includes_datatypes': False }
repo_data2 = { u'tool_shed_status':
{u'latest_installable_revision': u'False',
u'revision_update': u'False',
u'revision_upgrade': u'True',
u'repository_deprecated': u'False' },
u'status': u'Installed',
u'name': u'trimmomatic',
u'deleted': False,
u'ctx_rev': u'1',
u'error_message': u'',
u'installed_changeset_revision': u'3358c3d30143',
u'tool_shed': u'toolshed.g2.bx.psu.edu',
u'dist_to_shed': False,
u'url': u'/galaxy_dev/api/tool_shed_repositories/d6f760c242aa425c',
u'id': u'd6f760c242aa425c',
u'owner': u'pjbriggs',
u'uninstalled': False,
u'changeset_revision': u'2bd7cdbb6228',
u'includes_datatypes': False}
repo = Repository(repo_data2)
repo.add_revision(repo_data1)
self.assertEqual(repo.name,'trimmomatic')
self.assertEqual(repo.owner,'pjbriggs')
self.assertEqual(repo.tool_shed,'toolshed.g2.bx.psu.edu')
self.assertEqual(repo.id,
'toolshed.g2.bx.psu.edu/pjbriggs/trimmomatic')
revisions = repo.revisions()
# Most recent revision
self.assertEqual(len(revisions),2)
self.assertEqual(revisions[0].revision_number,'2')
self.assertEqual(revisions[0].changeset_revision,'a60283899c6d')
self.assertEqual(revisions[0].installed_changeset_revision,
'a60283899c6d')
self.assertEqual(revisions[0].status,'Installed')
self.assertEqual(revisions[0].error_message,'')
self.assertFalse(revisions[0].deleted)
self.assertFalse(revisions[0].revision_update)
self.assertFalse(revisions[0].revision_upgrade)
self.assertTrue(revisions[0].latest_revision)
self.assertEqual(revisions[0].revision_id,'2:a60283899c6d')
# Previous revision
self.assertEqual(revisions[1].revision_number,'1')
self.assertEqual(revisions[1].changeset_revision,'2bd7cdbb6228')
self.assertEqual(revisions[1].installed_changeset_revision,
'3358c3d30143')
self.assertEqual(revisions[1].status,'Installed')
self.assertEqual(revisions[1].error_message,'')
self.assertFalse(revisions[1].deleted)
self.assertFalse(revisions[1].revision_update)
self.assertTrue(revisions[1].revision_upgrade)
self.assertFalse(revisions[1].latest_revision)
self.assertEqual(revisions[1].revision_id,'1:2bd7cdbb6228')