""""""
import datetime
import json
import os
import posixpath
from neurodocker import __version__
from neurodocker.interfaces._base import _BaseInterface
from neurodocker.interfaces._base import apt_install
from neurodocker.interfaces._base import yum_install
_installation_implementations = {
ii._name: ii
for ii in _BaseInterface.__subclasses__()
}
ND_DIRECTORY = posixpath.join(posixpath.sep, 'neurodocker')
NEURODOCKER_ENTRYPOINT = posixpath.join(ND_DIRECTORY, 'startup.sh')
SPEC_FILE = posixpath.join(ND_DIRECTORY, 'neurodocker_specs.json')
# TODO: add common methods like `--install` here. Reference them in the
# Dockerfile and SingularityRecipe implementation classes.
def _add_to_entrypoint(cmd):
"""Return command to add `cmd` to the container's entrypoint."""
base_cmd = "sed -i '$i{}' $ND_ENTRYPOINT"
escaped_bash_cmd = json.dumps(cmd)[1:-1]
return base_cmd.format(escaped_bash_cmd)
""""""
import datetime
import json
import posixpath
from neurodocker import __version__
from neurodocker.interfaces._base import _BaseInterface
from neurodocker.interfaces._base import apt_install
from neurodocker.interfaces._base import yum_install
_installation_implementations = {
ii._name: ii for ii in _BaseInterface.__subclasses__()
}
ND_DIRECTORY = posixpath.join(posixpath.sep, 'neurodocker')
NEURODOCKER_ENTRYPOINT = posixpath.join(ND_DIRECTORY, 'startup.sh')
SPEC_FILE = posixpath.join(ND_DIRECTORY, 'neurodocker_specs.json')
# TODO: add common methods like `--install` here. Reference them in the
# Dockerfile and SingularityRecipe implementation classes.
def _add_to_entrypoint(cmd):
"""Return command to add `cmd` to the container's entrypoint."""
base_cmd = "sed -i '$i{}' $ND_ENTRYPOINT"
escaped_bash_cmd = json.dumps(cmd)[1:-1]
return base_cmd.format(escaped_bash_cmd)
def _apt_install(pkgs, apt_opts=None):