Python sanitize_configの例

コード例 #1

ファイル: test_morph_stats.py プロジェクト: jdcourcol/NeuroM

def test_sanitize_config():
    nt.assert_raises(ConfigError, ms.sanitize_config, {'neurite': []})

    new_config = ms.sanitize_config({}) #empty
    nt.eq_(2, len(new_config)) #neurite & neuron created

    full_config = {
        'neurite': {
            'section_lengths': ['max', 'total'],
            'section_volumes': ['total'],
            'section_branch_orders': ['max']
        },
        'neurite_type': ['AXON', 'APICAL_DENDRITE', 'BASAL_DENDRITE', 'ALL'],
        'neuron': {
            'soma_radii': ['mean']
        }
    }
    new_config = ms.sanitize_config(full_config)
    nt.eq_(3, len(new_config)) #neurite, neurite_type & neuron

コード例 #2

ファイル: test_morph_stats.py プロジェクト: yamagatm/NeuroM

def test_sanitize_config():
    nt.assert_raises(ConfigError, ms.sanitize_config, {'neurite': []})

    new_config = ms.sanitize_config({}) #empty
    nt.eq_(2, len(new_config)) #neurite & neuron created

    full_config = {
        'neurite': {
            'section_lengths': ['max', 'total'],
            'section_volumes': ['total'],
            'section_branch_orders': ['max']
        },
        'neurite_type': ['AXON', 'APICAL_DENDRITE', 'BASAL_DENDRITE', 'ALL'],
        'neuron': {
            'soma_radii': ['mean']
        }
    }
    new_config = ms.sanitize_config(full_config)
    nt.eq_(3, len(new_config)) #neurite, neurite_type & neuron

コード例 #3

def test_sanitize_config():

    with pytest.raises(ConfigError):
        ms.sanitize_config({'neurite': []})

    new_config = ms.sanitize_config({})  # empty
    assert 2 == len(new_config)  # neurite & neuron created

    full_config = {
        'neurite': {
            'section_lengths': ['max', 'total'],
            'section_volumes': ['total'],
            'section_branch_orders': ['max']
        },
        'neurite_type': ['AXON', 'APICAL_DENDRITE', 'BASAL_DENDRITE', 'ALL'],
        'neuron': {
            'soma_radii': ['mean']
        }
    }
    new_config = ms.sanitize_config(full_config)
    assert 3 == len(new_config)  # neurite, neurite_type & neuron