Python full_brain_infoの例

コード例 #1

ファイル: test_html_surface.py プロジェクト: jeromedockes/nilearn

def test_fill_html_template():
    fsaverage = fetch_surf_fsaverage()
    mesh = surface.load_surf_mesh(fsaverage['pial_right'])
    surf_map = mesh[0][:, 0]
    img = _get_img()
    info = html_surface.one_mesh_info(
        surf_map, fsaverage['pial_right'], '90%', black_bg=True,
        bg_map=fsaverage['sulc_right'])
    html = html_surface._fill_html_template(info, embed_js=False)
    check_html(html)
    assert "jquery.min.js" in html.html
    info = html_surface.full_brain_info(img)
    html = html_surface._fill_html_template(info)
    check_html(html)
    assert "* plotly.js (gl3d - minified) v1.38.3" in html.html

コード例 #2

ファイル: test_html_surface.py プロジェクト: reiningc/nilearn

def test_fill_html_template():
    fsaverage = fetch_surf_fsaverage()
    mesh = surface.load_surf_mesh(fsaverage['pial_right'])
    surf_map = mesh[0][:, 0]
    img = _get_img()
    info = html_surface.one_mesh_info(
        surf_map, fsaverage['pial_right'], '90%', black_bg=True,
        bg_map=fsaverage['sulc_right'])
    html = html_surface._fill_html_template(info, embed_js=False)
    check_html(html)
    assert "jquery.min.js" in html.html
    info = html_surface.full_brain_info(img)
    html = html_surface._fill_html_template(info)
    check_html(html)
    assert "* plotly.js (gl3d - minified) v1.38.3" in html.html

コード例 #3

ファイル: test_html_surface.py プロジェクト: thomasbazeille/nilearn

def test_full_brain_info():
    surfaces = datasets.fetch_surf_fsaverage()
    img = _get_img()
    info = html_surface.full_brain_info(img, surfaces)
    check_colors(info['colorscale'])
    assert {'pial_left', 'pial_right',
            'inflated_left', 'inflated_right',
            'vertexcolor_left', 'vertexcolor_right'}.issubset(info.keys())
    assert info['cmin'] == - info['cmax']
    assert info['full_brain_mesh']
    assert not info['black_bg']
    assert type(info['cmax']) == float
    json.dumps(info)
    for hemi in ['left', 'right']:
        mesh = surface.load_surf_mesh(surfaces['pial_{}'.format(hemi)])
        assert len(info['vertexcolor_{}'.format(hemi)]) == len(mesh[0])
        assert len(decode(
            info['inflated_{}'.format(hemi)]['_z'], '<f4')) == len(mesh[0])
        assert len(decode(
            info['pial_{}'.format(hemi)]['_j'], '<i4')) == len(mesh[1])

コード例 #4

ファイル: test_html_surface.py プロジェクト: jeromedockes/nilearn

def test_full_brain_info():
    fsaverage = fetch_surf_fsaverage()
    img = _get_img()
    info = html_surface.full_brain_info(img)
    check_colors(info['colorscale'])
    assert {'pial_left', 'pial_right',
            'inflated_left', 'inflated_right',
            'vertexcolor_left', 'vertexcolor_right'}.issubset(info.keys())
    assert info['cmin'] == - info['cmax']
    assert info['full_brain_mesh']
    assert not info['black_bg']
    assert type(info['cmax']) == float
    json.dumps(info)
    for hemi in ['left', 'right']:
        mesh = surface.load_surf_mesh(fsaverage['pial_{}'.format(hemi)])
        assert len(info['vertexcolor_{}'.format(hemi)]) == len(mesh[0])
        assert len(decode(
            info['inflated_{}'.format(hemi)]['_z'], '<f4')) == len(mesh[0])
        assert len(decode(
            info['pial_{}'.format(hemi)]['_j'], '<i4')) == len(mesh[1])