Python view_img_on_surfの例

コード例 #1

def test_view_img_on_surf():
    img = _get_img()
    surfaces = datasets.fetch_surf_fsaverage()
    html = html_surface.view_img_on_surf(img, threshold='92.3%')
    check_html(html)
    html = html_surface.view_img_on_surf(img, threshold=0, surf_mesh=surfaces)
    check_html(html)
    html = html_surface.view_img_on_surf(img, threshold=.4, title="SOME_TITLE")
    assert "SOME_TITLE" in html.html
    check_html(html)
    html = html_surface.view_img_on_surf(
        img, threshold=.4, cmap='hot', black_bg=True)
    check_html(html)
    with pytest.raises(DimensionError):
        html_surface.view_img_on_surf([img, img])
    img_4d = image.new_img_like(img, get_data(img)[:, :, :, np.newaxis])
    assert len(img_4d.shape) == 4
    html = html_surface.view_img_on_surf(img, threshold='92.3%')
    check_html(html)
    np.clip(get_data(img), 0, None, out=get_data(img))
    html = html_surface.view_img_on_surf(img, symmetric_cmap=False)
    check_html(html)
    html = html_surface.view_img_on_surf(img, symmetric_cmap=False,
                                         vol_to_surf_kwargs={
                                             "n_samples": 1,
                                             "radius": 0.,
                                             "interpolation": "nearest"})
    check_html(html)

コード例 #2

ファイル: test_html_surface.py プロジェクト: ramku31/nilearn

def test_view_img_on_surf():
    img = _get_img()
    fsaverage = dict(fetch_surf_fsaverage())
    html = html_surface.view_img_on_surf(img, threshold='92.3%')
    check_html(html)
    html = html_surface.view_img_on_surf(img, threshold=0, surf_mesh=fsaverage)
    check_html(html)
    html = html_surface.view_img_on_surf(img, threshold=.4, title="SOME_TITLE")
    assert "SOME_TITLE" in html.html
    check_html(html)
    html = html_surface.view_img_on_surf(img,
                                         threshold=.4,
                                         cmap='hot',
                                         black_bg=True)
    check_html(html)
    html = html_surface.view_img_on_surf(img, surf_mesh='fsaverage')
    check_html(html)
    with pytest.raises(DimensionError):
        html_surface.view_img_on_surf([img, img])
    img_4d = image.new_img_like(img, get_data(img)[:, :, :, np.newaxis])
    assert len(img_4d.shape) == 4
    html = html_surface.view_img_on_surf(img, threshold='92.3%')
    check_html(html)
    np.clip(get_data(img), 0, None, out=get_data(img))
    html = html_surface.view_img_on_surf(img, symmetric_cmap=False)
    check_html(html)

コード例 #3

ファイル: test_html_surface.py プロジェクト: bthirion/nilearn

def test_view_img_on_surf():
    img = _get_img()
    fsaverage = dict(fetch_surf_fsaverage())
    html = html_surface.view_img_on_surf(img, threshold='92.3%')
    check_html(html)
    html = html_surface.view_img_on_surf(img, threshold=0, surf_mesh=fsaverage)
    check_html(html)
    html = html_surface.view_img_on_surf(img, threshold=.4)
    check_html(html)
    html = html_surface.view_img_on_surf(
        img, threshold=.4, cmap='hot', black_bg=True)
    check_html(html)
    html = html_surface.view_img_on_surf(img, surf_mesh='fsaverage')
    check_html(html)
    assert_raises(DimensionError, html_surface.view_img_on_surf, [img, img])

コード例 #4

ファイル: test_html_surface.py プロジェクト: reiningc/nilearn

def test_view_img_on_surf():
    img = _get_img()
    fsaverage = dict(fetch_surf_fsaverage())
    html = html_surface.view_img_on_surf(img, threshold='92.3%')
    check_html(html)
    html = html_surface.view_img_on_surf(img, threshold=0, surf_mesh=fsaverage)
    check_html(html)
    html = html_surface.view_img_on_surf(img, threshold=.4)
    check_html(html)
    html = html_surface.view_img_on_surf(
        img, threshold=.4, cmap='hot', black_bg=True)
    check_html(html)
    html = html_surface.view_img_on_surf(img, surf_mesh='fsaverage')
    check_html(html)
    assert_raises(DimensionError, html_surface.view_img_on_surf, [img, img])
    img_4d = image.new_img_like(img, img.get_data()[:, :, :, np.newaxis])
    assert len(img_4d.shape) == 4
    html = html_surface.view_img_on_surf(img, threshold='92.3%')
    check_html(html)
    np.clip(img.get_data(), 0, None, out=img.get_data())
    html = html_surface.view_img_on_surf(img, symmetric_cmap=False)
    check_html(html)

コード例 #5

ファイル: test_html_surface.py プロジェクト: jeromedockes/nilearn

def test_view_img_on_surf():
    img = _get_img()
    fsaverage = dict(fetch_surf_fsaverage())
    html = html_surface.view_img_on_surf(img, threshold='92.3%')
    check_html(html)
    html = html_surface.view_img_on_surf(img, threshold=0, surf_mesh=fsaverage)
    check_html(html)
    html = html_surface.view_img_on_surf(img, threshold=.4)
    check_html(html)
    html = html_surface.view_img_on_surf(
        img, threshold=.4, cmap='hot', black_bg=True)
    check_html(html)
    html = html_surface.view_img_on_surf(img, surf_mesh='fsaverage')
    check_html(html)
    assert_raises(DimensionError, html_surface.view_img_on_surf, [img, img])
    img_4d = image.new_img_like(img, img.get_data()[:, :, :, np.newaxis])
    assert len(img_4d.shape) == 4
    html = html_surface.view_img_on_surf(img, threshold='92.3%')
    check_html(html)