def test_JointFusion_inputs():
input_map = dict(
alpha=dict(
requires=['method'],
usedefault=True,
),
args=dict(argstr='%s', ),
atlas_group_id=dict(argstr='-gp %d...', ),
atlas_group_weights=dict(argstr='-gpw %d...', ),
beta=dict(
requires=['method'],
usedefault=True,
),
dimension=dict(
argstr='%d',
mandatory=True,
position=0,
usedefault=True,
),
environ=dict(
nohash=True,
usedefault=True,
),
exclusion_region=dict(argstr='-x %s', ),
ignore_exception=dict(
nohash=True,
usedefault=True,
),
method=dict(
argstr='-m %s',
usedefault=True,
),
modalities=dict(
argstr='%d',
mandatory=True,
position=1,
),
num_threads=dict(
nohash=True,
usedefault=True,
),
output_label_image=dict(
argstr='%s',
mandatory=True,
name_template='%s',
output_name='output_label_image',
position=-1,
),
patch_radius=dict(
argstr='-rp %s',
maxlen=3,
minlen=3,
),
search_radius=dict(
argstr='-rs %s',
maxlen=3,
minlen=3,
),
target_image=dict(
argstr='-tg %s...',
mandatory=True,
),
terminal_output=dict(nohash=True, ),
warped_intensity_images=dict(
argstr='-g %s...',
mandatory=True,
),
warped_label_images=dict(
argstr='-l %s...',
mandatory=True,
),
)
inputs = JointFusion.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_JointFusion_inputs():
input_map = dict(alpha=dict(requires=['method'],
usedefault=True,
),
args=dict(argstr='%s',
),
atlas_group_id=dict(argstr='-gp %d...',
),
atlas_group_weights=dict(argstr='-gpw %d...',
),
beta=dict(requires=['method'],
usedefault=True,
),
dimension=dict(argstr='%d',
mandatory=True,
position=0,
usedefault=True,
),
environ=dict(nohash=True,
usedefault=True,
),
exclusion_region=dict(argstr='-x %s',
),
ignore_exception=dict(nohash=True,
usedefault=True,
),
method=dict(argstr='-m %s',
usedefault=True,
),
modalities=dict(argstr='%d',
mandatory=True,
position=1,
),
num_threads=dict(nohash=True,
usedefault=True,
),
output_label_image=dict(argstr='%s',
mandatory=True,
name_template='%s',
output_name='output_label_image',
position=-1,
),
patch_radius=dict(argstr='-rp %s',
maxlen=3,
minlen=3,
),
search_radius=dict(argstr='-rs %s',
maxlen=3,
minlen=3,
),
target_image=dict(argstr='-tg %s...',
mandatory=True,
),
terminal_output=dict(nohash=True,
),
warped_intensity_images=dict(argstr='-g %s...',
mandatory=True,
),
warped_label_images=dict(argstr='-l %s...',
mandatory=True,
),
)
inputs = JointFusion.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
