def test_ReconAll_outputs():
output_map = dict(
BA_stats=dict(
altkey='BA',
loc='stats',
),
T1=dict(loc='mri', ),
annot=dict(
altkey='*annot',
loc='label',
),
aparc_a2009s_stats=dict(
altkey='aparc.a2009s',
loc='stats',
),
aparc_aseg=dict(
altkey='aparc*aseg',
loc='mri',
),
aparc_stats=dict(
altkey='aparc',
loc='stats',
),
aseg=dict(loc='mri', ),
aseg_stats=dict(
altkey='aseg',
loc='stats',
),
brain=dict(loc='mri', ),
brainmask=dict(loc='mri', ),
curv=dict(loc='surf', ),
curv_stats=dict(
altkey='curv',
loc='stats',
),
entorhinal_exvivo_stats=dict(
altkey='entorhinal_exvivo',
loc='stats',
),
filled=dict(loc='mri', ),
inflated=dict(loc='surf', ),
label=dict(
altkey='*label',
loc='label',
),
norm=dict(loc='mri', ),
nu=dict(loc='mri', ),
orig=dict(loc='mri', ),
pial=dict(loc='surf', ),
rawavg=dict(loc='mri', ),
ribbon=dict(
altkey='*ribbon',
loc='mri',
),
smoothwm=dict(loc='surf', ),
sphere=dict(loc='surf', ),
sphere_reg=dict(
altkey='sphere.reg',
loc='surf',
),
subject_id=dict(),
subjects_dir=dict(),
sulc=dict(loc='surf', ),
thickness=dict(loc='surf', ),
volume=dict(loc='surf', ),
white=dict(loc='surf', ),
wm=dict(loc='mri', ),
wmparc=dict(loc='mri', ),
wmparc_stats=dict(
altkey='wmparc',
loc='stats',
),
)
outputs = ReconAll.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_ReconAll_outputs():
output_map = dict(BA_stats=dict(altkey='BA',
loc='stats',
),
T1=dict(loc='mri',
),
annot=dict(altkey='*annot',
loc='label',
),
aparc_a2009s_stats=dict(altkey='aparc.a2009s',
loc='stats',
),
aparc_aseg=dict(altkey='aparc*aseg',
loc='mri',
),
aparc_stats=dict(altkey='aparc',
loc='stats',
),
aseg=dict(loc='mri',
),
aseg_stats=dict(altkey='aseg',
loc='stats',
),
brain=dict(loc='mri',
),
brainmask=dict(loc='mri',
),
curv=dict(loc='surf',
),
curv_stats=dict(altkey='curv',
loc='stats',
),
entorhinal_exvivo_stats=dict(altkey='entorhinal_exvivo',
loc='stats',
),
filled=dict(loc='mri',
),
inflated=dict(loc='surf',
),
label=dict(altkey='*label',
loc='label',
),
norm=dict(loc='mri',
),
nu=dict(loc='mri',
),
orig=dict(loc='mri',
),
pial=dict(loc='surf',
),
rawavg=dict(loc='mri',
),
ribbon=dict(altkey='*ribbon',
loc='mri',
),
smoothwm=dict(loc='surf',
),
sphere=dict(loc='surf',
),
sphere_reg=dict(altkey='sphere.reg',
loc='surf',
),
subject_id=dict(),
subjects_dir=dict(),
sulc=dict(loc='surf',
),
thickness=dict(loc='surf',
),
volume=dict(loc='surf',
),
white=dict(loc='surf',
),
wm=dict(loc='mri',
),
wmparc=dict(loc='mri',
),
wmparc_stats=dict(altkey='wmparc',
loc='stats',
),
)
outputs = ReconAll.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
