def test_BRAINSDemonWarp_outputs(): output_map = dict(outputCheckerboardVolume=dict(), outputDisplacementFieldVolume=dict(), outputVolume=dict(), ) outputs = BRAINSDemonWarp.output_spec() for key, metadata in output_map.items(): for metakey, value in metadata.items(): yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_BRAINSDemonWarp_outputs(): output_map = dict( outputCheckerboardVolume=dict(), outputDisplacementFieldVolume=dict(), outputVolume=dict(), ) outputs = BRAINSDemonWarp.output_spec() for key, metadata in output_map.items(): for metakey, value in metadata.items(): yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_BRAINSDemonWarp_inputs(): input_map = dict(args=dict(argstr='%s', ), arrayOfPyramidLevelIterations=dict(argstr='--arrayOfPyramidLevelIterations %s', sep=',', ), backgroundFillValue=dict(argstr='--backgroundFillValue %d', ), checkerboardPatternSubdivisions=dict(argstr='--checkerboardPatternSubdivisions %s', sep=',', ), environ=dict(nohash=True, usedefault=True, ), fixedBinaryVolume=dict(argstr='--fixedBinaryVolume %s', ), fixedVolume=dict(argstr='--fixedVolume %s', ), gradient_type=dict(argstr='--gradient_type %s', ), gui=dict(argstr='--gui ', ), histogramMatch=dict(argstr='--histogramMatch ', ), ignore_exception=dict(nohash=True, usedefault=True, ), initializeWithDisplacementField=dict(argstr='--initializeWithDisplacementField %s', ), initializeWithTransform=dict(argstr='--initializeWithTransform %s', ), inputPixelType=dict(argstr='--inputPixelType %s', ), interpolationMode=dict(argstr='--interpolationMode %s', ), lowerThresholdForBOBF=dict(argstr='--lowerThresholdForBOBF %d', ), maskProcessingMode=dict(argstr='--maskProcessingMode %s', ), max_step_length=dict(argstr='--max_step_length %f', ), medianFilterSize=dict(argstr='--medianFilterSize %s', sep=',', ), minimumFixedPyramid=dict(argstr='--minimumFixedPyramid %s', sep=',', ), minimumMovingPyramid=dict(argstr='--minimumMovingPyramid %s', sep=',', ), movingBinaryVolume=dict(argstr='--movingBinaryVolume %s', ), movingVolume=dict(argstr='--movingVolume %s', ), neighborhoodForBOBF=dict(argstr='--neighborhoodForBOBF %s', sep=',', ), numberOfBCHApproximationTerms=dict(argstr='--numberOfBCHApproximationTerms %d', ), numberOfHistogramBins=dict(argstr='--numberOfHistogramBins %d', ), numberOfMatchPoints=dict(argstr='--numberOfMatchPoints %d', ), numberOfPyramidLevels=dict(argstr='--numberOfPyramidLevels %d', ), numberOfThreads=dict(argstr='--numberOfThreads %d', ), outputCheckerboardVolume=dict(argstr='--outputCheckerboardVolume %s', hash_files=False, ), outputDebug=dict(argstr='--outputDebug ', ), outputDisplacementFieldPrefix=dict(argstr='--outputDisplacementFieldPrefix %s', ), outputDisplacementFieldVolume=dict(argstr='--outputDisplacementFieldVolume %s', hash_files=False, ), outputNormalized=dict(argstr='--outputNormalized ', ), outputPixelType=dict(argstr='--outputPixelType %s', ), outputVolume=dict(argstr='--outputVolume %s', hash_files=False, ), promptUser=dict(argstr='--promptUser ', ), registrationFilterType=dict(argstr='--registrationFilterType %s', ), seedForBOBF=dict(argstr='--seedForBOBF %s', sep=',', ), smoothDisplacementFieldSigma=dict(argstr='--smoothDisplacementFieldSigma %f', ), terminal_output=dict(nohash=True, ), upFieldSmoothing=dict(argstr='--upFieldSmoothing %f', ), upperThresholdForBOBF=dict(argstr='--upperThresholdForBOBF %d', ), use_vanilla_dem=dict(argstr='--use_vanilla_dem ', ), ) inputs = BRAINSDemonWarp.input_spec() for key, metadata in input_map.items(): for metakey, value in metadata.items(): yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_BRAINSDemonWarp_inputs(): input_map = dict( args=dict(argstr='%s', ), arrayOfPyramidLevelIterations=dict( argstr='--arrayOfPyramidLevelIterations %s', sep=',', ), backgroundFillValue=dict(argstr='--backgroundFillValue %d', ), checkerboardPatternSubdivisions=dict( argstr='--checkerboardPatternSubdivisions %s', sep=',', ), environ=dict( nohash=True, usedefault=True, ), fixedBinaryVolume=dict(argstr='--fixedBinaryVolume %s', ), fixedVolume=dict(argstr='--fixedVolume %s', ), gradient_type=dict(argstr='--gradient_type %s', ), gui=dict(argstr='--gui ', ), histogramMatch=dict(argstr='--histogramMatch ', ), ignore_exception=dict( nohash=True, usedefault=True, ), initializeWithDisplacementField=dict( argstr='--initializeWithDisplacementField %s', ), initializeWithTransform=dict(argstr='--initializeWithTransform %s', ), inputPixelType=dict(argstr='--inputPixelType %s', ), interpolationMode=dict(argstr='--interpolationMode %s', ), lowerThresholdForBOBF=dict(argstr='--lowerThresholdForBOBF %d', ), maskProcessingMode=dict(argstr='--maskProcessingMode %s', ), max_step_length=dict(argstr='--max_step_length %f', ), medianFilterSize=dict( argstr='--medianFilterSize %s', sep=',', ), minimumFixedPyramid=dict( argstr='--minimumFixedPyramid %s', sep=',', ), minimumMovingPyramid=dict( argstr='--minimumMovingPyramid %s', sep=',', ), movingBinaryVolume=dict(argstr='--movingBinaryVolume %s', ), movingVolume=dict(argstr='--movingVolume %s', ), neighborhoodForBOBF=dict( argstr='--neighborhoodForBOBF %s', sep=',', ), numberOfBCHApproximationTerms=dict( argstr='--numberOfBCHApproximationTerms %d', ), numberOfHistogramBins=dict(argstr='--numberOfHistogramBins %d', ), numberOfMatchPoints=dict(argstr='--numberOfMatchPoints %d', ), numberOfPyramidLevels=dict(argstr='--numberOfPyramidLevels %d', ), numberOfThreads=dict(argstr='--numberOfThreads %d', ), outputCheckerboardVolume=dict( argstr='--outputCheckerboardVolume %s', hash_files=False, ), outputDebug=dict(argstr='--outputDebug ', ), outputDisplacementFieldPrefix=dict( argstr='--outputDisplacementFieldPrefix %s', ), outputDisplacementFieldVolume=dict( argstr='--outputDisplacementFieldVolume %s', hash_files=False, ), outputNormalized=dict(argstr='--outputNormalized ', ), outputPixelType=dict(argstr='--outputPixelType %s', ), outputVolume=dict( argstr='--outputVolume %s', hash_files=False, ), promptUser=dict(argstr='--promptUser ', ), registrationFilterType=dict(argstr='--registrationFilterType %s', ), seedForBOBF=dict( argstr='--seedForBOBF %s', sep=',', ), smoothDisplacementFieldSigma=dict( argstr='--smoothDisplacementFieldSigma %f', ), terminal_output=dict(nohash=True, ), upFieldSmoothing=dict(argstr='--upFieldSmoothing %f', ), upperThresholdForBOBF=dict(argstr='--upperThresholdForBOBF %d', ), use_vanilla_dem=dict(argstr='--use_vanilla_dem ', ), ) inputs = BRAINSDemonWarp.input_spec() for key, metadata in input_map.items(): for metakey, value in metadata.items(): yield assert_equal, getattr(inputs.traits()[key], metakey), value