def data_coverage(paths=[],
starttime=None,
endtime=None,
scale=lambda x: x,
invalid_value=0.0):
"""
Calculates the datacoverage percentage between ``starttime`` and
``endtime``.
See :class:`~obspy.imaging.scripts.scan.Scanner` and
:meth:`~obspy.imaging.scripts.scan.Scanner.analyze_parsed_data`
for more information.
:type paths: list
:param paths: list of filepaths (as string values)
to the datefiles to be scanned
:type starttime: :class:`~obspy.core.utcdatetime.UTCDateTime`
:param starttime:
:type endtime: :class:`~obspy.core.utcdatetime.UTCDateTime`
:param endtime:
:type scale: func, optional
:param scale: defaults to identity function,
scaling function applied to data values
:type invalid_value: float, optional
:param invalid_value: default to ``0.0``
:rtype: list or None
:return: list of lists containing timestamp (as
:class:`~obspy.core.utcdatetime.UTCDateTime` instance), data value,
and additional z value as string.
"""
if starttime is None or endtime is None:
return None
if starttime > endtime:
starttime, endtime = endtime, starttime
st0 = Stream()
for path in paths:
st = fileutils.get_stream(path)
if st is None:
continue
st0 += st
percentage = invalid_value
# Arbitrary z_value as string following python dictionary syntax
z_value = "{{'starttime':'{}'}}".format(str(starttime))
if len(st0) > 0:
scanner = Scanner()
scanner.add_stream(st0)
scanner.analyze_parsed_data(starttime=starttime, endtime=endtime)
percentage = scanner._info[st0[0].id]['percentage']
percentage = invalid_value if percentage is None else percentage
percentage = scale(percentage)
return [[endtime, percentage, z_value]]
def test_scanner_manually_add_streams(self, all_files, image_path):
"""
Test Scanner class, manually adding streams of read data files
"""
scanner = Scanner()
# Copy files to a temp folder to avoid wildcard scans.
with TemporaryWorkingDirectory():
for filename in all_files:
shutil.copy(filename, os.curdir)
for file_ in os.listdir(os.curdir):
# some files used in the test cases actually can not
# be read with obspy..
if file_ in ('STA2.testlines_out', 'STA2.testlines',
'seism-shorter.sac', 'seism-longer.sac'):
continue
st = read(file_, headonly=True)
scanner.add_stream(st)
scanner.plot(str(image_path))
def test_scanner_manually_add_streams(self):
"""
Test Scanner class, manually adding streams of read data files
"""
scanner = Scanner()
# Copy files to a temp folder to avoid wildcard scans.
with TemporaryWorkingDirectory():
for filename in self.all_files:
shutil.copy(filename, os.curdir)
for file_ in os.listdir(os.curdir):
# some files used in the test cases actually can not
# be read with obspy..
if file_ in ('STA2.testlines_out', 'STA2.testlines',
'seism-shorter.sac', 'seism-longer.sac'):
continue
st = read(file_, headonly=True)
scanner.add_stream(st)
with ImageComparison(self.path, 'scan.png') as ic:
scanner.plot(ic.name)