コード例 #1
0
ファイル: settings.py プロジェクト: Mahmood-B/odemis
    def __init__(self, tab_panel, tab_data):
        super(SparcAlignSettingsController, self).__init__(tab_data)
        main_data = tab_data.main
        self._ar_setting_cont = AngularSettingsController(
            tab_panel.fp_ma_settings_ar, "No angle-resolved camera found")
        self._spect_setting_cont = SpectrumSettingsController(
            tab_panel.fp_ma_settings_spectrum, "No spectrometer found")

        if main_data.ccd:
            self.add_hw_component(main_data.ccd, self._ar_setting_cont)

        if main_data.spectrometer:
            self.add_hw_component(main_data.spectrometer,
                                  self._spect_setting_cont)
            # increase a bit the font size for easy reading from far
            self.add_spec_chronograph(self._spect_setting_cont, 12)

        if main_data.spectrograph:
            comp = main_data.spectrograph
            conf = get_hw_config(comp, self._hw_settings_config)
            for a in ("wavelength", "grating", "slit-in"):
                if a not in comp.axes:
                    logging.debug(
                        "Skipping non existent axis %s on component %s", a,
                        comp.name)
                    continue
                self._spect_setting_cont.add_axis(a, comp, conf.get(a))
コード例 #2
0
ファイル: settings.py プロジェクト: Mahmood-B/odemis
    def add_hw_component(self, hw_comp, setting_controller, hidden=None):
        """ Add setting entries for the given hardware component

        hidden (None or set of str): name of VAs to not show

        """

        hidden = HIDDEN_VAS | (hidden or set())
        self.setting_controllers.append(setting_controller)

        vas_comp = getVAs(hw_comp)
        vas_config = get_hw_config(
            hw_comp, self._hw_settings_config)  # OrderedDict or dict

        # Re-order the VAs of the component in the same order as in the config
        vas_names = util.sorted_according_to(list(vas_comp.keys()),
                                             list(vas_config.keys()))

        for name in vas_names:
            try:
                if name in hidden:
                    continue
                elif name in vas_config:
                    va_conf = vas_config[name]
                else:
                    logging.debug("No config found for %s: %s", hw_comp.role,
                                  name)
                    va_conf = None
                va = vas_comp[name]
                setting_controller.add_setting_entry(name, va, hw_comp,
                                                     va_conf)
            except TypeError:
                msg = "Error adding %s setting for: %s"
                logging.exception(msg, hw_comp.name, name)
コード例 #3
0
ファイル: settings.py プロジェクト: delmic/odemis
    def __init__(self, tab_panel, tab_data):
        super(SparcAlignSettingsController, self).__init__(tab_data)
        main_data = tab_data.main
        self._ar_setting_cont = AngularSettingsController(tab_panel.fp_ma_settings_ar,
                                                          "No angle-resolved camera found")
        self._spect_setting_cont = SpectrumSettingsController(tab_panel.fp_ma_settings_spectrum,
                                                              "No spectrometer found")

        if main_data.ccd:
            self.add_hw_component(main_data.ccd, self._ar_setting_cont)

        if main_data.spectrometer:
            self.add_hw_component(main_data.spectrometer, self._spect_setting_cont)
            # increase a bit the font size for easy reading from far
            self.add_spec_chronograph(self._spect_setting_cont, 12)

        if main_data.spectrograph:
            comp = main_data.spectrograph
            conf = get_hw_config(comp, self._hw_settings_config)
            for a in ("wavelength", "grating", "slit-in"):
                if a not in comp.axes:
                    logging.debug("Skipping non existent axis %s on component %s",
                                  a, comp.name)
                    continue
                self._spect_setting_cont.add_axis(a, comp, conf.get(a))
コード例 #4
0
ファイル: settings.py プロジェクト: delmic/odemis
    def add_hw_component(self, hw_comp, setting_controller, hidden=None):
        """ Add setting entries for the given hardware component

        hidden (None or set of str): name of VAs to not show

        """

        hidden = HIDDEN_VAS | (hidden or set())
        self.setting_controllers.append(setting_controller)

        vas_comp = getVAs(hw_comp)
        vas_config = get_hw_config(hw_comp, self._hw_settings_config)  # OrderedDict or dict

        # Re-order the VAs of the component in the same order as in the config
        vas_names = util.sorted_according_to(vas_comp.keys(), vas_config.keys())

        for name in vas_names:
            try:
                if name in hidden:
                    continue
                elif name in vas_config:
                    va_conf = vas_config[name]
                else:
                    logging.debug("No config found for %s: %s", hw_comp.role, name)
                    va_conf = None
                va = vas_comp[name]
                setting_controller.add_setting_entry(name, va, hw_comp, va_conf)
            except TypeError:
                msg = "Error adding %s setting for: %s"
                logging.exception(msg, hw_comp.name, name)
コード例 #5
0
ファイル: settings.py プロジェクト: Mahmood-B/odemis
    def __init__(self, tab_panel, tab_data, highlight_change=False):
        super(SecomSettingsController, self).__init__(tab_data)
        main_data = tab_data.main

        self._sem_panel = SemSettingsController(
            tab_panel.fp_settings_secom_sem, "No SEM found", highlight_change,
            tab_data)

        self._optical_panel = OpticalSettingsController(
            tab_panel.fp_settings_secom_optical, "No optical microscope found",
            highlight_change, tab_data)

        # Add the components based on what is available
        # TODO: move it to a separate thread to save time at init?
        if main_data.ccd:
            # Hide exposureTime as it's in local settings of the stream
            self.add_hw_component(main_data.ccd,
                                  self._optical_panel,
                                  hidden={"exposureTime"})

        if hasattr(tab_data, "confocal_set_stream"):
            conf_set_e = StreamController(tab_panel.pnl_opt_streams,
                                          tab_data.confocal_set_stream,
                                          tab_data)
            conf_set_e.stream_panel.flatten()  # removes the expander header
            # StreamController looks pretty much the same as SettingController
            self.setting_controllers.append(conf_set_e)
        else:
            tab_panel.pnl_opt_streams.Hide()  # Not needed

        # For now, we assume that the pinhole (axis) is global: valid for all
        # the confocal streams and FLIM stream. That's partly because most likely
        # the user wouldn't want to have separate values... and also because
        # anyway we don't currently support local stream axes.
        if main_data.pinhole:
            conf = get_hw_config(main_data.pinhole, self._hw_settings_config)
            for a in ("d", ):
                if a not in main_data.pinhole.axes:
                    continue
                self._optical_panel.add_axis(a, main_data.pinhole, conf.get(a))

        if main_data.ebeam:
            self.add_hw_component(main_data.ebeam, self._sem_panel)

            # If can do AutoContrast, display the button
            # TODO: check if detector has a .applyAutoContrast() method, instead
            # of detecting indirectly via the presence of .bpp.
            det = main_data.sed or main_data.bsd
            if det and model.hasVA(det, "bpp"):
                self._sem_panel.add_bc_control(det)
コード例 #6
0
ファイル: settings.py プロジェクト: delmic/odemis
    def __init__(self, tab_panel, tab_data, highlight_change=False):
        super(SecomSettingsController, self).__init__(tab_data)
        main_data = tab_data.main

        self._sem_panel = SemSettingsController(tab_panel.fp_settings_secom_sem,
                                                "No SEM found",
                                                highlight_change,
                                                tab_data)

        self._optical_panel = OpticalSettingsController(tab_panel.fp_settings_secom_optical,
                                                        "No optical microscope found",
                                                        highlight_change,
                                                        tab_data)

        # Add the components based on what is available
        # TODO: move it to a separate thread to save time at init?
        if main_data.ccd:
            # Hide exposureTime as it's in local settings of the stream
            self.add_hw_component(main_data.ccd, self._optical_panel, hidden={"exposureTime"})

        if hasattr(tab_data, "confocal_set_stream"):
            conf_set_e = StreamController(tab_panel.pnl_opt_streams, tab_data.confocal_set_stream, tab_data)
            conf_set_e.stream_panel.flatten()  # removes the expander header
            # StreamController looks pretty much the same as SettingController
            self.setting_controllers.append(conf_set_e)
        else:
            tab_panel.pnl_opt_streams.Hide()  # Not needed

        # For now, we assume that the pinhole (axis) is global: valid for all
        # the confocal streams and FLIM stream. That's partly because most likely
        # the user wouldn't want to have separate values... and also because
        # anyway we don't currently support local stream axes.
        if main_data.pinhole:
            conf = get_hw_config(main_data.pinhole, self._hw_settings_config)
            for a in ("d",):
                if a not in main_data.pinhole.axes:
                    continue
                self._optical_panel.add_axis(a, main_data.pinhole, conf.get(a))

        if main_data.ebeam:
            self.add_hw_component(main_data.ebeam, self._sem_panel)

            # If can do AutoContrast, display the button
            # TODO: check if detector has a .applyAutoContrast() method, instead
            # of detecting indirectly via the presence of .bpp.
            det = main_data.sed or main_data.bsd
            if det and model.hasVA(det, "bpp"):
                self._sem_panel.add_bc_control(det)