def createConsumerInvokeSetOne():
cw = ClassWriter(0)
cw.visit(
52, Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL + Opcodes.ACC_SUPER,
"my/InvokeSetOne",
"<T::Lnet/imglib2/type/operators/SetOne>Ljava/lang/ObjectLjava/util/function/Consumer<TT>;",
"java/lang/Object", ["java/util/function/Consumer"])
mv = cw.visitMethod(Opcodes.ACC_PUBLIC, "<init>", "()V", None, None)
mv.visitCode()
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "java/lang/Object", "<init>",
"()V", False)
mv.visitInsn(Opcodes.RETURN)
mv.visitMaxs(1, 1)
mv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL, "accept",
"(Lnet/imglib2/type/operators/SetOne;)V", "(TT)V",
None)
mv.visitCode()
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE,
"net/imglib2/type/operators/SetOne", "setOne", "()V",
True)
mv.visitInsn(Opcodes.RETURN)
mv.visitMaxs(1, 2)
mv.visitEnd()
mv = cw.visitMethod(
Opcodes.ACC_PUBLIC + Opcodes.ACC_BRIDGE + Opcodes.ACC_SYNTHETIC,
"accept", "(Ljava/lang/Object;)V", None, None)
mv.visitCode()
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitTypeInsn(Opcodes.CHECKCAST, "net/imglib2/type/operators/SetOne")
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "my/InvokeSetOne", "accept",
"(Lnet/imglib2/type/operators/SetOne;)V", False)
mv.visitInsn(Opcodes.RETURN)
mv.visitMaxs(2, 2)
mv.visitEnd()
cw.visitEnd()
# Load class
return CustomClassLoader().defineClass("my.InvokeSetOne", cw.toByteArray())
def createNativePointMatchesClass(classloader=None):
# Class my/PointMatchesFast
cw = ClassWriter(0)
cw.visit(52, Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL + Opcodes.ACC_SUPER, "my/PointMatchesFast", None, "java/lang/Object", None)
fv = cw.visitField(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL, "pointmatches", "Ljava/util/List;", "Ljava/util/List<Lmpicbg/models/PointMatch;>;", None)
fv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PUBLIC, "<init>", "(Ljava/util/List;)V", "(Ljava/util/List<Lmpicbg/models/PointMatch;>;)V", None)
mv.visitCode()
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "java/lang/Object", "<init>", "()V")
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitFieldInsn(Opcodes.PUTFIELD, "my/PointMatchesFast", "pointmatches", "Ljava/util/List;")
mv.visitInsn(Opcodes.RETURN)
mv.visitMaxs(2, 2)
mv.visitEnd()
for PM_method, C_method in (("fromFeatures", "matches"),
("fromFeaturesScaleInvariant", "matchesScaleInvariant")):
mv = cw.visitMethod(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL + Opcodes.ACC_STATIC, PM_method, "(Ljava/util/List;Ljava/util/List;DD)Lmy/PointMatchesFast;", "(Ljava/util/List<Lmy/ConstellationFast;>;Ljava/util/List<Lmy/ConstellationFast;>;DD)Lmy/PointMatchesFast;", None)
mv.visitCode()
mv.visitTypeInsn(Opcodes.NEW, "java/util/ArrayList")
mv.visitInsn(Opcodes.DUP)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "java/util/ArrayList", "<init>", "()V")
mv.visitVarInsn(Opcodes.ASTORE, 6)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "iterator", "()Ljava/util/Iterator;")
mv.visitVarInsn(Opcodes.ASTORE, 7)
l0 = Label()
mv.visitLabel(l0)
mv.visitFrame(Opcodes.F_APPEND,2, ["java/util/List", "java/util/Iterator"], 0, None)
mv.visitVarInsn(Opcodes.ALOAD, 7)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/Iterator", "hasNext", "()Z")
l1 = Label()
mv.visitJumpInsn(Opcodes.IFEQ, l1)
mv.visitVarInsn(Opcodes.ALOAD, 7)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/Iterator", "next", "()Ljava/lang/Object;")
mv.visitTypeInsn(Opcodes.CHECKCAST, "my/ConstellationFast")
mv.visitVarInsn(Opcodes.ASTORE, 8)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "iterator", "()Ljava/util/Iterator;")
mv.visitVarInsn(Opcodes.ASTORE, 9)
l2 = Label()
mv.visitLabel(l2)
mv.visitFrame(Opcodes.F_APPEND,2, ["my/ConstellationFast", "java/util/Iterator"], 0, None)
mv.visitVarInsn(Opcodes.ALOAD, 9)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/Iterator", "hasNext", "()Z")
l3 = Label()
mv.visitJumpInsn(Opcodes.IFEQ, l3)
mv.visitVarInsn(Opcodes.ALOAD, 9)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/Iterator", "next", "()Ljava/lang/Object;")
mv.visitTypeInsn(Opcodes.CHECKCAST, "my/ConstellationFast")
mv.visitVarInsn(Opcodes.ASTORE, 10)
mv.visitVarInsn(Opcodes.ALOAD, 8)
mv.visitVarInsn(Opcodes.ALOAD, 10)
mv.visitVarInsn(Opcodes.DLOAD, 2)
mv.visitVarInsn(Opcodes.DLOAD, 4)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "my/ConstellationFast", C_method, "(Lmy/ConstellationFast;DD)Z")
l4 = Label()
mv.visitJumpInsn(Opcodes.IFEQ, l4)
mv.visitVarInsn(Opcodes.ALOAD, 6)
mv.visitTypeInsn(Opcodes.NEW, "mpicbg/models/PointMatch")
mv.visitInsn(Opcodes.DUP)
mv.visitVarInsn(Opcodes.ALOAD, 8)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "position", "Lmpicbg/models/Point;")
mv.visitVarInsn(Opcodes.ALOAD, 10)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "position", "Lmpicbg/models/Point;")
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "mpicbg/models/PointMatch", "<init>", "(Lmpicbg/models/Point;Lmpicbg/models/Point;)V")
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "add", "(Ljava/lang/Object;)Z")
mv.visitInsn(Opcodes.POP)
mv.visitLabel(l4)
mv.visitFrame(Opcodes.F_SAME, 0, None, 0, None)
mv.visitJumpInsn(Opcodes.GOTO, l2)
mv.visitLabel(l3)
mv.visitFrame(Opcodes.F_CHOP,2, None, 0, None)
mv.visitJumpInsn(Opcodes.GOTO, l0)
mv.visitLabel(l1)
mv.visitFrame(Opcodes.F_CHOP,1, None, 0, None)
mv.visitTypeInsn(Opcodes.NEW, "my/PointMatchesFast")
mv.visitInsn(Opcodes.DUP)
mv.visitVarInsn(Opcodes.ALOAD, 6)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "my/PointMatchesFast", "<init>", "(Ljava/util/List;)V")
mv.visitInsn(Opcodes.ARETURN)
mv.visitMaxs(6, 11)
mv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL + Opcodes.ACC_STATIC, "fromNearbyFeatures", "(DLjava/util/List;Ljava/util/List;DD)Lmy/PointMatchesFast;", "(DLjava/util/List<Lmy/ConstellationFast;>;Ljava/util/List<Lmy/ConstellationFast;>;DD)Lmy/PointMatchesFast;", None)
mv.visitCode()
mv.visitTypeInsn(Opcodes.NEW, "java/util/ArrayList")
mv.visitInsn(Opcodes.DUP)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "java/util/ArrayList", "<init>", "()V")
mv.visitVarInsn(Opcodes.ASTORE, 8)
mv.visitVarInsn(Opcodes.ALOAD, 3)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "iterator", "()Ljava/util/Iterator;")
mv.visitVarInsn(Opcodes.ASTORE, 9)
l0 = Label()
mv.visitLabel(l0)
mv.visitFrame(Opcodes.F_APPEND,2, ["java/util/List", "java/util/Iterator"], 0, None)
mv.visitVarInsn(Opcodes.ALOAD, 9)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/Iterator", "hasNext", "()Z")
l1 = Label()
mv.visitJumpInsn(Opcodes.IFEQ, l1)
mv.visitVarInsn(Opcodes.ALOAD, 9)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/Iterator", "next", "()Ljava/lang/Object;")
mv.visitTypeInsn(Opcodes.CHECKCAST, "my/ConstellationFast")
mv.visitVarInsn(Opcodes.ASTORE, 10)
mv.visitVarInsn(Opcodes.ALOAD, 8)
mv.visitVarInsn(Opcodes.ALOAD, 10)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "position", "Lmpicbg/models/Point;")
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "mpicbg/models/Point", "getW", "()[D")
mv.visitMethodInsn(Opcodes.INVOKESTATIC, "net/imglib2/RealPoint", "wrap", "([D)Lnet/imglib2/RealPoint;")
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "add", "(Ljava/lang/Object;)Z")
mv.visitInsn(Opcodes.POP)
mv.visitJumpInsn(Opcodes.GOTO, l0)
mv.visitLabel(l1)
mv.visitFrame(Opcodes.F_CHOP,1, None, 0, None)
mv.visitTypeInsn(Opcodes.NEW, "net/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree")
mv.visitInsn(Opcodes.DUP)
mv.visitTypeInsn(Opcodes.NEW, "net/imglib2/KDTree")
mv.visitInsn(Opcodes.DUP)
mv.visitVarInsn(Opcodes.ALOAD, 3)
mv.visitVarInsn(Opcodes.ALOAD, 8)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "net/imglib2/KDTree", "<init>", "(Ljava/util/List;Ljava/util/List;)V")
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "net/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree", "<init>", "(Lnet/imglib2/KDTree;)V")
mv.visitVarInsn(Opcodes.ASTORE, 9)
mv.visitTypeInsn(Opcodes.NEW, "java/util/ArrayList")
mv.visitInsn(Opcodes.DUP)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "java/util/ArrayList", "<init>", "()V")
mv.visitVarInsn(Opcodes.ASTORE, 10)
mv.visitVarInsn(Opcodes.ALOAD, 2)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "iterator", "()Ljava/util/Iterator;")
mv.visitVarInsn(Opcodes.ASTORE, 11)
l2 = Label()
mv.visitLabel(l2)
mv.visitFrame(Opcodes.F_APPEND,3, ["net/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree", "java/util/List", "java/util/Iterator"], 0, None)
mv.visitVarInsn(Opcodes.ALOAD, 11)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/Iterator", "hasNext", "()Z")
l3 = Label()
mv.visitJumpInsn(Opcodes.IFEQ, l3)
mv.visitVarInsn(Opcodes.ALOAD, 11)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/Iterator", "next", "()Ljava/lang/Object;")
mv.visitTypeInsn(Opcodes.CHECKCAST, "my/ConstellationFast")
mv.visitVarInsn(Opcodes.ASTORE, 12)
mv.visitVarInsn(Opcodes.ALOAD, 9)
mv.visitVarInsn(Opcodes.ALOAD, 12)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "position", "Lmpicbg/models/Point;")
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "mpicbg/models/Point", "getW", "()[D")
mv.visitMethodInsn(Opcodes.INVOKESTATIC, "net/imglib2/RealPoint", "wrap", "([D)Lnet/imglib2/RealPoint;")
mv.visitVarInsn(Opcodes.DLOAD, 0)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "net/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree", "search", "(Lnet/imglib2/RealLocalizable;DZ)V")
mv.visitInsn(Opcodes.ICONST_0)
mv.visitVarInsn(Opcodes.ISTORE, 13)
mv.visitVarInsn(Opcodes.ALOAD, 9)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "net/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree", "numNeighbors", "()I")
mv.visitVarInsn(Opcodes.ISTORE, 14)
l4 = Label()
mv.visitLabel(l4)
mv.visitFrame(Opcodes.F_APPEND,3, ["my/ConstellationFast", Opcodes.INTEGER, Opcodes.INTEGER], 0, None)
mv.visitVarInsn(Opcodes.ILOAD, 13)
mv.visitVarInsn(Opcodes.ILOAD, 14)
l5 = Label()
mv.visitJumpInsn(Opcodes.IF_ICMPGE, l5)
mv.visitVarInsn(Opcodes.ALOAD, 9)
mv.visitVarInsn(Opcodes.ILOAD, 13)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "net/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree", "getSampler", "(I)Lnet/imglib2/Sampler;")
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "net/imglib2/Sampler", "get", "()Ljava/lang/Object;")
mv.visitTypeInsn(Opcodes.CHECKCAST, "my/ConstellationFast")
mv.visitVarInsn(Opcodes.ASTORE, 15)
mv.visitVarInsn(Opcodes.ALOAD, 12)
mv.visitVarInsn(Opcodes.ALOAD, 15)
mv.visitVarInsn(Opcodes.DLOAD, 4)
mv.visitVarInsn(Opcodes.DLOAD, 6)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "my/ConstellationFast", "matches", "(Lmy/ConstellationFast;DD)Z")
l6 = Label()
mv.visitJumpInsn(Opcodes.IFEQ, l6)
mv.visitVarInsn(Opcodes.ALOAD, 10)
mv.visitTypeInsn(Opcodes.NEW, "mpicbg/models/PointMatch")
mv.visitInsn(Opcodes.DUP)
mv.visitVarInsn(Opcodes.ALOAD, 12)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "position", "Lmpicbg/models/Point;")
mv.visitVarInsn(Opcodes.ALOAD, 15)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "position", "Lmpicbg/models/Point;")
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "mpicbg/models/PointMatch", "<init>", "(Lmpicbg/models/Point;Lmpicbg/models/Point;)V")
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "add", "(Ljava/lang/Object;)Z")
mv.visitInsn(Opcodes.POP)
mv.visitLabel(l6)
mv.visitFrame(Opcodes.F_SAME, 0, None, 0, None)
mv.visitIincInsn(13, 1)
mv.visitJumpInsn(Opcodes.GOTO, l4)
mv.visitLabel(l5)
mv.visitFrame(Opcodes.F_CHOP,3, None, 0, None)
mv.visitJumpInsn(Opcodes.GOTO, l2)
mv.visitLabel(l3)
mv.visitFrame(Opcodes.F_CHOP,1, None, 0, None)
mv.visitTypeInsn(Opcodes.NEW, "my/PointMatchesFast")
mv.visitInsn(Opcodes.DUP)
mv.visitVarInsn(Opcodes.ALOAD, 10)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "my/PointMatchesFast", "<init>", "(Ljava/util/List;)V")
mv.visitInsn(Opcodes.ARETURN)
mv.visitMaxs(6, 16)
mv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL, "toRows", "()[[D", None, None)
mv.visitCode()
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/PointMatchesFast", "pointmatches", "Ljava/util/List;")
mv.visitInsn(Opcodes.ICONST_0)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "get", "(I)Ljava/lang/Object;", True)
mv.visitTypeInsn(Opcodes.CHECKCAST, "mpicbg/models/PointMatch")
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "mpicbg/models/PointMatch", "getP1", "()Lmpicbg/models/Point;", False)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "mpicbg/models/Point", "getW", "()[D", False)
mv.visitInsn(Opcodes.ARRAYLENGTH)
mv.visitVarInsn(Opcodes.ISTORE, 1)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/PointMatchesFast", "pointmatches", "Ljava/util/List;")
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "size", "()I", True)
mv.visitVarInsn(Opcodes.ILOAD, 1)
mv.visitVarInsn(Opcodes.ILOAD, 1)
mv.visitInsn(Opcodes.IADD)
mv.visitMultiANewArrayInsn("[[D", 2)
mv.visitVarInsn(Opcodes.ASTORE, 2)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitVarInsn(Opcodes.ISTORE, 3)
l0 = Label()
mv.visitLabel(l0)
mv.visitFrame(Opcodes.F_APPEND,3, [Opcodes.INTEGER, "[[D", Opcodes.INTEGER], 0, None)
mv.visitVarInsn(Opcodes.ILOAD, 3)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/PointMatchesFast", "pointmatches", "Ljava/util/List;")
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "size", "()I", True)
l1 = Label()
mv.visitJumpInsn(Opcodes.IF_ICMPGE, l1)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/PointMatchesFast", "pointmatches", "Ljava/util/List;")
mv.visitVarInsn(Opcodes.ILOAD, 3)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "get", "(I)Ljava/lang/Object;", True)
mv.visitTypeInsn(Opcodes.CHECKCAST, "mpicbg/models/PointMatch")
mv.visitVarInsn(Opcodes.ASTORE, 4)
mv.visitVarInsn(Opcodes.ALOAD, 4)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "mpicbg/models/PointMatch", "getP1", "()Lmpicbg/models/Point;", False)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "mpicbg/models/Point", "getW", "()[D", False)
mv.visitVarInsn(Opcodes.ASTORE, 5)
mv.visitVarInsn(Opcodes.ALOAD, 4)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "mpicbg/models/PointMatch", "getP2", "()Lmpicbg/models/Point;", False)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "mpicbg/models/Point", "getW", "()[D", False)
mv.visitVarInsn(Opcodes.ASTORE, 6)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitVarInsn(Opcodes.ISTORE, 7)
l2 = Label()
mv.visitLabel(l2)
mv.visitFrame(Opcodes.F_FULL, 8, ["my/PointMatchesFast", Opcodes.INTEGER, "[[D", Opcodes.INTEGER, "mpicbg/models/PointMatch", "[D", "[D", Opcodes.INTEGER], 0, [])
mv.visitVarInsn(Opcodes.ILOAD, 7)
mv.visitVarInsn(Opcodes.ILOAD, 1)
l3 = Label()
mv.visitJumpInsn(Opcodes.IF_ICMPGE, l3)
mv.visitVarInsn(Opcodes.ALOAD, 2)
mv.visitVarInsn(Opcodes.ILOAD, 3)
mv.visitInsn(Opcodes.AALOAD)
mv.visitVarInsn(Opcodes.ILOAD, 7)
mv.visitVarInsn(Opcodes.ALOAD, 5)
mv.visitVarInsn(Opcodes.ILOAD, 7)
mv.visitInsn(Opcodes.DALOAD)
mv.visitInsn(Opcodes.DASTORE)
mv.visitIincInsn(7, 1)
mv.visitJumpInsn(Opcodes.GOTO, l2)
mv.visitLabel(l3)
mv.visitFrame(Opcodes.F_CHOP,1, None, 0, None)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitVarInsn(Opcodes.ISTORE, 7)
l4 = Label()
mv.visitLabel(l4)
mv.visitFrame(Opcodes.F_APPEND,1, [Opcodes.INTEGER], 0, None)
mv.visitVarInsn(Opcodes.ILOAD, 7)
mv.visitVarInsn(Opcodes.ILOAD, 1)
l5 = Label()
mv.visitJumpInsn(Opcodes.IF_ICMPGE, l5)
mv.visitVarInsn(Opcodes.ALOAD, 2)
mv.visitVarInsn(Opcodes.ILOAD, 3)
mv.visitInsn(Opcodes.AALOAD)
mv.visitVarInsn(Opcodes.ILOAD, 1)
mv.visitVarInsn(Opcodes.ILOAD, 7)
mv.visitInsn(Opcodes.IADD)
mv.visitVarInsn(Opcodes.ALOAD, 6)
mv.visitVarInsn(Opcodes.ILOAD, 7)
mv.visitInsn(Opcodes.DALOAD)
mv.visitInsn(Opcodes.DASTORE)
mv.visitIincInsn(7, 1)
mv.visitJumpInsn(Opcodes.GOTO, l4)
mv.visitLabel(l5)
mv.visitFrame(Opcodes.F_FULL, 4, ["my/PointMatchesFast", Opcodes.INTEGER, "[[D", Opcodes.INTEGER], 0, [])
mv.visitIincInsn(3, 1)
mv.visitJumpInsn(Opcodes.GOTO, l0)
mv.visitLabel(l1)
mv.visitFrame(Opcodes.F_CHOP,1, None, 0, None)
mv.visitVarInsn(Opcodes.ALOAD, 2)
mv.visitInsn(Opcodes.ARETURN)
mv.visitMaxs(4, 8)
mv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL + Opcodes.ACC_STATIC, "fromRows", "(Ljava/util/Iterator;)Lmy/PointMatchesFast;", "(Ljava/util/Iterator<Ljava/util/List<Ljava/lang/String;>;>;)Lmy/PointMatchesFast;", None)
mv.visitCode()
mv.visitTypeInsn(Opcodes.NEW, "java/util/ArrayList")
mv.visitInsn(Opcodes.DUP)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "java/util/ArrayList", "<init>", "()V", False)
mv.visitVarInsn(Opcodes.ASTORE, 1)
l0 = Label()
mv.visitLabel(l0)
mv.visitFrame(Opcodes.F_APPEND,1, ["java/util/List"], 0, None)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/Iterator", "hasNext", "()Z", True)
l1 = Label()
mv.visitJumpInsn(Opcodes.IFEQ, l1)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/Iterator", "next", "()Ljava/lang/Object;", True)
mv.visitTypeInsn(Opcodes.CHECKCAST, "java/util/List")
mv.visitVarInsn(Opcodes.ASTORE, 2)
mv.visitVarInsn(Opcodes.ALOAD, 2)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "size", "()I", True)
mv.visitInsn(Opcodes.ICONST_2)
mv.visitInsn(Opcodes.IDIV)
mv.visitVarInsn(Opcodes.ISTORE, 3)
mv.visitVarInsn(Opcodes.ILOAD, 3)
mv.visitIntInsn(Opcodes.NEWARRAY, Opcodes.T_DOUBLE)
mv.visitVarInsn(Opcodes.ASTORE, 4)
mv.visitVarInsn(Opcodes.ILOAD, 3)
mv.visitIntInsn(Opcodes.NEWARRAY, Opcodes.T_DOUBLE)
mv.visitVarInsn(Opcodes.ASTORE, 5)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitVarInsn(Opcodes.ISTORE, 6)
l2 = Label()
mv.visitLabel(l2)
mv.visitFrame(Opcodes.F_FULL, 7, ["java/util/Iterator", "java/util/List", "java/util/List", Opcodes.INTEGER, "[D", "[D", Opcodes.INTEGER], 0, [])
mv.visitVarInsn(Opcodes.ILOAD, 6)
mv.visitVarInsn(Opcodes.ILOAD, 3)
l3 = Label()
mv.visitJumpInsn(Opcodes.IF_ICMPGE, l3)
mv.visitVarInsn(Opcodes.ALOAD, 4)
mv.visitVarInsn(Opcodes.ILOAD, 6)
mv.visitVarInsn(Opcodes.ALOAD, 2)
mv.visitVarInsn(Opcodes.ILOAD, 6)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "get", "(I)Ljava/lang/Object;", True)
mv.visitTypeInsn(Opcodes.CHECKCAST, "java/lang/String")
mv.visitMethodInsn(Opcodes.INVOKESTATIC, "java/lang/Double", "parseDouble", "(Ljava/lang/String;)D", False)
mv.visitInsn(Opcodes.DASTORE)
mv.visitIincInsn(6, 1)
mv.visitJumpInsn(Opcodes.GOTO, l2)
mv.visitLabel(l3)
mv.visitFrame(Opcodes.F_CHOP,1, None, 0, None)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitVarInsn(Opcodes.ISTORE, 6)
l4 = Label()
mv.visitLabel(l4)
mv.visitFrame(Opcodes.F_APPEND,1, [Opcodes.INTEGER], 0, None)
mv.visitVarInsn(Opcodes.ILOAD, 6)
mv.visitVarInsn(Opcodes.ILOAD, 3)
l5 = Label()
mv.visitJumpInsn(Opcodes.IF_ICMPGE, l5)
mv.visitVarInsn(Opcodes.ALOAD, 5)
mv.visitVarInsn(Opcodes.ILOAD, 6)
mv.visitVarInsn(Opcodes.ALOAD, 2)
mv.visitVarInsn(Opcodes.ILOAD, 3)
mv.visitVarInsn(Opcodes.ILOAD, 6)
mv.visitInsn(Opcodes.IADD)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "get", "(I)Ljava/lang/Object;", True)
mv.visitTypeInsn(Opcodes.CHECKCAST, "java/lang/String")
mv.visitMethodInsn(Opcodes.INVOKESTATIC, "java/lang/Double", "parseDouble", "(Ljava/lang/String;)D", False)
mv.visitInsn(Opcodes.DASTORE)
mv.visitIincInsn(6, 1)
mv.visitJumpInsn(Opcodes.GOTO, l4)
mv.visitLabel(l5)
mv.visitFrame(Opcodes.F_CHOP,1, None, 0, None)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitTypeInsn(Opcodes.NEW, "mpicbg/models/PointMatch")
mv.visitInsn(Opcodes.DUP)
mv.visitTypeInsn(Opcodes.NEW, "mpicbg/models/Point")
mv.visitInsn(Opcodes.DUP)
mv.visitVarInsn(Opcodes.ALOAD, 4)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "mpicbg/models/Point", "<init>", "([D)V", False)
mv.visitTypeInsn(Opcodes.NEW, "mpicbg/models/Point")
mv.visitInsn(Opcodes.DUP)
mv.visitVarInsn(Opcodes.ALOAD, 5)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "mpicbg/models/Point", "<init>", "([D)V", False)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "mpicbg/models/PointMatch", "<init>", "(Lmpicbg/models/Point;Lmpicbg/models/Point;)V", False)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "add", "(Ljava/lang/Object;)Z", True)
mv.visitInsn(Opcodes.POP)
mv.visitJumpInsn(Opcodes.GOTO, l0)
mv.visitLabel(l1)
mv.visitFrame(Opcodes.F_FULL, 2, ["java/util/Iterator", "java/util/List"], 0, [])
mv.visitTypeInsn(Opcodes.NEW, "my/PointMatchesFast")
mv.visitInsn(Opcodes.DUP)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "my/PointMatchesFast", "<init>", "(Ljava/util/List;)V", False)
mv.visitInsn(Opcodes.ARETURN)
mv.visitMaxs(7, 7)
mv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL + Opcodes.ACC_STATIC, "csvHeader", "(Lmpicbg/models/PointMatch;)[Ljava/lang/String;", None, None)
mv.visitCode()
mv.visitInsn(Opcodes.ICONST_3)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "mpicbg/models/PointMatch", "getP1", "()Lmpicbg/models/Point;", False)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "mpicbg/models/Point", "getW", "()[D", False)
mv.visitInsn(Opcodes.ARRAYLENGTH)
l0 = Label()
mv.visitJumpInsn(Opcodes.IF_ICMPNE, l0)
mv.visitIntInsn(Opcodes.BIPUSH, 6)
mv.visitTypeInsn(Opcodes.ANEWARRAY, "java/lang/String")
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitLdcInsn("x1")
mv.visitInsn(Opcodes.AASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_1)
mv.visitLdcInsn("y1")
mv.visitInsn(Opcodes.AASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_2)
mv.visitLdcInsn("z1")
mv.visitInsn(Opcodes.AASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_3)
mv.visitLdcInsn("x2")
mv.visitInsn(Opcodes.AASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_4)
mv.visitLdcInsn("y2")
mv.visitInsn(Opcodes.AASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_5)
mv.visitLdcInsn("z2")
mv.visitInsn(Opcodes.AASTORE)
l1 = Label()
mv.visitJumpInsn(Opcodes.GOTO, l1)
mv.visitLabel(l0)
mv.visitFrame(Opcodes.F_SAME, 0, None, 0, None)
mv.visitInsn(Opcodes.ICONST_4)
mv.visitTypeInsn(Opcodes.ANEWARRAY, "java/lang/String")
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitLdcInsn("x1")
mv.visitInsn(Opcodes.AASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_1)
mv.visitLdcInsn("y1")
mv.visitInsn(Opcodes.AASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_2)
mv.visitLdcInsn("x2")
mv.visitInsn(Opcodes.AASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_3)
mv.visitLdcInsn("y2")
mv.visitInsn(Opcodes.AASTORE)
mv.visitLabel(l1)
mv.visitFrame(Opcodes.F_SAME1, 0, None, 1, ["[Ljava/lang/String;"])
mv.visitInsn(Opcodes.ARETURN)
mv.visitMaxs(4, 1)
mv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL + Opcodes.ACC_STATIC, "asRow", "(Lmpicbg/models/PointMatch;)[D", None, None)
mv.visitCode()
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "mpicbg/models/PointMatch", "getP1", "()Lmpicbg/models/Point;", False)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "mpicbg/models/Point", "getW", "()[D", False)
mv.visitVarInsn(Opcodes.ASTORE, 1)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "mpicbg/models/PointMatch", "getP2", "()Lmpicbg/models/Point;", False)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "mpicbg/models/Point", "getW", "()[D", False)
mv.visitVarInsn(Opcodes.ASTORE, 2)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitInsn(Opcodes.ARRAYLENGTH)
mv.visitVarInsn(Opcodes.ALOAD, 2)
mv.visitInsn(Opcodes.ARRAYLENGTH)
mv.visitInsn(Opcodes.IADD)
mv.visitIntInsn(Opcodes.NEWARRAY, Opcodes.T_DOUBLE)
mv.visitVarInsn(Opcodes.ASTORE, 3)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitVarInsn(Opcodes.ISTORE, 4)
l0 = Label()
mv.visitLabel(l0)
mv.visitFrame(Opcodes.F_FULL, 5, ["mpicbg/models/PointMatch", "[D", "[D", "[D", Opcodes.INTEGER], 0, [])
mv.visitVarInsn(Opcodes.ILOAD, 4)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitInsn(Opcodes.ARRAYLENGTH)
l1 = Label()
mv.visitJumpInsn(Opcodes.IF_ICMPGE, l1)
mv.visitVarInsn(Opcodes.ALOAD, 3)
mv.visitVarInsn(Opcodes.ILOAD, 4)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitVarInsn(Opcodes.ILOAD, 4)
mv.visitInsn(Opcodes.DALOAD)
mv.visitInsn(Opcodes.DASTORE)
mv.visitIincInsn(4, 1)
mv.visitJumpInsn(Opcodes.GOTO, l0)
mv.visitLabel(l1)
mv.visitFrame(Opcodes.F_CHOP,1, None, 0, None)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitVarInsn(Opcodes.ISTORE, 4)
l2 = Label()
mv.visitLabel(l2)
mv.visitFrame(Opcodes.F_APPEND,1, [Opcodes.INTEGER], 0, None)
mv.visitVarInsn(Opcodes.ILOAD, 4)
mv.visitVarInsn(Opcodes.ALOAD, 2)
mv.visitInsn(Opcodes.ARRAYLENGTH)
l3 = Label()
mv.visitJumpInsn(Opcodes.IF_ICMPGE, l3)
mv.visitVarInsn(Opcodes.ALOAD, 3)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitInsn(Opcodes.ARRAYLENGTH)
mv.visitVarInsn(Opcodes.ILOAD, 4)
mv.visitInsn(Opcodes.IADD)
mv.visitVarInsn(Opcodes.ALOAD, 2)
mv.visitVarInsn(Opcodes.ILOAD, 4)
mv.visitInsn(Opcodes.DALOAD)
mv.visitInsn(Opcodes.DASTORE)
mv.visitIincInsn(4, 1)
mv.visitJumpInsn(Opcodes.GOTO, l2)
mv.visitLabel(l3)
mv.visitFrame(Opcodes.F_CHOP,1, None, 0, None)
mv.visitVarInsn(Opcodes.ALOAD, 3)
mv.visitInsn(Opcodes.ARETURN)
mv.visitMaxs(4, 5)
mv.visitEnd()
cw.visitEnd()
if not classloader:
classloader = CustomClassLoader()
return classloader.defineClass("my/PointMatchesFast", cw.toByteArray())
def defineBiConsumerTypeSet(imglib2Type, classname=None):
"""
A class to use in e.g. an ImgLib2 LoopBuilder.setImages(img1, img2).forEachPixel(<instance of this BiConsumer class>)
where both image are of the same Type, and the value of one has to be set as the value of the other, like this:
type1.set(type2)
In java, this would be written as: LoopBuilder.setImages(img1, img2).forEachPixel( (type1, type2) -> type1.set(type2) );
"""
typeClassname = imglib2Type.getName().replace(".", "/")
if classname is None:
classname = "asm/loop/BiConsumer_%s_set" % imglib2Type.getSimpleName()
classWriter = ClassWriter(0)
classWriter.visit(
Opcodes.V1_8, Opcodes.ACC_PUBLIC | Opcodes.ACC_SUPER, classname,
"<T::L%s<TT;>;>Ljava/lang/Object;Ljava/util/function/BiConsumer<TT;TT;>;"
% typeClassname, "java/lang/Object", ["java/util/function/BiConsumer"])
# Constructor
methodVisitor = classWriter.visitMethod(Opcodes.ACC_PUBLIC, "<init>",
"()V", None, None)
methodVisitor.visitCode()
methodVisitor.visitVarInsn(Opcodes.ALOAD, 0)
methodVisitor.visitMethodInsn(Opcodes.INVOKESPECIAL, "java/lang/Object",
"<init>", "()V", False)
methodVisitor.visitInsn(Opcodes.RETURN)
methodVisitor.visitMaxs(1, 1)
methodVisitor.visitEnd()
# BiConsumer.accept method implementation with body Type.set(Type)
methodVisitor = classWriter.visitMethod(
Opcodes.ACC_PUBLIC, "accept",
"(L%s;L%s;)V" % (typeClassname, typeClassname), "(TT;TT;)V", None)
methodVisitor.visitCode()
methodVisitor.visitVarInsn(Opcodes.ALOAD, 2)
methodVisitor.visitVarInsn(Opcodes.ALOAD, 1)
methodVisitor.visitMethodInsn(Opcodes.INVOKEVIRTUAL, typeClassname, "set",
"(L%s;)V" % typeClassname, False)
methodVisitor.visitInsn(Opcodes.RETURN)
methodVisitor.visitMaxs(2, 3)
methodVisitor.visitEnd()
# BiConsumer.accept method with Object,Object arguments: to provide a bridge between the BiConsumer.accept method and the class accept method
methodVisitor = classWriter.visitMethod(
Opcodes.ACC_PUBLIC | Opcodes.ACC_BRIDGE | Opcodes.ACC_SYNTHETIC,
"accept", "(Ljava/lang/Object;Ljava/lang/Object;)V", None, None)
methodVisitor.visitCode()
methodVisitor.visitVarInsn(Opcodes.ALOAD, 0)
methodVisitor.visitVarInsn(Opcodes.ALOAD, 1)
methodVisitor.visitTypeInsn(Opcodes.CHECKCAST, typeClassname)
methodVisitor.visitVarInsn(Opcodes.ALOAD, 2)
methodVisitor.visitTypeInsn(Opcodes.CHECKCAST, typeClassname)
methodVisitor.visitMethodInsn(
Opcodes.INVOKEVIRTUAL, classname, "accept",
"(L%s;L%s;)V" % (typeClassname, typeClassname), False)
methodVisitor.visitInsn(Opcodes.RETURN)
methodVisitor.visitMaxs(3, 3)
methodVisitor.visitEnd()
classWriter.visitEnd()
loader = CustomClassLoader()
biconsumerClass = loader.defineClass(classname, classWriter.toByteArray())
return biconsumerClass
def createNativeConstellationClass(classloader=None):
""" A Constellation class implemented natively in java using the ASM library. """
cw = ClassWriter(0)
cw.visit(52, Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL + Opcodes.ACC_SUPER, "my/ConstellationFast", None, "java/lang/Object", None)
fv = cw.visitField(Opcodes.ACC_PRIVATE + Opcodes.ACC_FINAL, "angle", "D", None, None)
fv.visitEnd()
fv = cw.visitField(Opcodes.ACC_PRIVATE + Opcodes.ACC_FINAL, "len1", "D", None, None)
fv.visitEnd()
fv = cw.visitField(Opcodes.ACC_PRIVATE + Opcodes.ACC_FINAL, "len2", "D", None, None)
fv.visitEnd()
fv = cw.visitField(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL, "position", "Lmpicbg/models/Point;", None, None)
fv.visitEnd()
fv = cw.visitField(Opcodes.ACC_PRIVATE + Opcodes.ACC_FINAL, "len_ratio", "D", None, None)
fv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PUBLIC, "<init>", "(DDD[D)V", None, None)
mv.visitCode()
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "java/lang/Object", "<init>", "()V")
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitVarInsn(Opcodes.DLOAD, 1)
mv.visitFieldInsn(Opcodes.PUTFIELD, "my/ConstellationFast", "angle", "D")
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitVarInsn(Opcodes.DLOAD, 3)
mv.visitFieldInsn(Opcodes.PUTFIELD, "my/ConstellationFast", "len1", "D")
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitVarInsn(Opcodes.DLOAD, 5)
mv.visitFieldInsn(Opcodes.PUTFIELD, "my/ConstellationFast", "len2", "D")
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitVarInsn(Opcodes.DLOAD, 3)
mv.visitVarInsn(Opcodes.DLOAD, 3)
mv.visitVarInsn(Opcodes.DLOAD, 5)
mv.visitInsn(Opcodes.DADD)
mv.visitInsn(Opcodes.DDIV)
mv.visitFieldInsn(Opcodes.PUTFIELD, "my/ConstellationFast", "len_ratio", "D")
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitTypeInsn(Opcodes.NEW, "mpicbg/models/Point")
mv.visitInsn(Opcodes.DUP)
mv.visitVarInsn(Opcodes.ALOAD, 7)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "mpicbg/models/Point", "<init>", "([D)V")
mv.visitFieldInsn(Opcodes.PUTFIELD, "my/ConstellationFast", "position", "Lmpicbg/models/Point;")
mv.visitInsn(Opcodes.RETURN)
mv.visitMaxs(7, 8)
mv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL, "matches", "(Lmy/ConstellationFast;DD)Z", None, None)
mv.visitCode()
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "angle", "D")
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "angle", "D")
mv.visitInsn(Opcodes.DSUB)
mv.visitMethodInsn(Opcodes.INVOKESTATIC, "java/lang/Math", "abs", "(D)D")
mv.visitVarInsn(Opcodes.DLOAD, 2)
mv.visitInsn(Opcodes.DCMPG)
l0 = Label()
mv.visitJumpInsn(Opcodes.IFGE, l0)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "len1", "D")
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "len1", "D")
mv.visitInsn(Opcodes.DSUB)
mv.visitMethodInsn(Opcodes.INVOKESTATIC, "java/lang/Math", "abs", "(D)D")
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "len2", "D")
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "len2", "D")
mv.visitInsn(Opcodes.DSUB)
mv.visitMethodInsn(Opcodes.INVOKESTATIC, "java/lang/Math", "abs", "(D)D")
mv.visitInsn(Opcodes.DADD)
mv.visitVarInsn(Opcodes.DLOAD, 4)
mv.visitInsn(Opcodes.DCMPG)
mv.visitJumpInsn(Opcodes.IFGE, l0)
mv.visitInsn(Opcodes.ICONST_1)
l1 = Label()
mv.visitJumpInsn(Opcodes.GOTO, l1)
mv.visitLabel(l0)
mv.visitFrame(Opcodes.F_SAME, 0, None, 0, None)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitLabel(l1)
mv.visitFrame(Opcodes.F_SAME1, 0, None, 1, [Opcodes.INTEGER])
mv.visitInsn(Opcodes.IRETURN)
mv.visitMaxs(6, 6)
mv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL, "matchesScaleInvariant", "(Lmy/ConstellationFast;DD)Z", None, None)
mv.visitCode()
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "angle", "D")
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "angle", "D")
mv.visitInsn(Opcodes.DSUB)
mv.visitMethodInsn(Opcodes.INVOKESTATIC, "java/lang/Math", "abs", "(D)D")
mv.visitVarInsn(Opcodes.DLOAD, 2)
mv.visitInsn(Opcodes.DCMPG)
l0 = Label()
mv.visitJumpInsn(Opcodes.IFGE, l0)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "len_ratio", "D")
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "len_ratio", "D")
mv.visitInsn(Opcodes.DSUB)
mv.visitMethodInsn(Opcodes.INVOKESTATIC, "java/lang/Math", "abs", "(D)D")
mv.visitVarInsn(Opcodes.DLOAD, 4)
mv.visitInsn(Opcodes.DCMPG)
mv.visitJumpInsn(Opcodes.IFGE, l0)
mv.visitInsn(Opcodes.ICONST_1)
l1 = Label()
mv.visitJumpInsn(Opcodes.GOTO, l1)
mv.visitLabel(l0)
mv.visitFrame(Opcodes.F_SAME, 0, None, 0, None)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitLabel(l1)
mv.visitFrame(Opcodes.F_SAME1, 0, None, 1, [Opcodes.INTEGER])
mv.visitInsn(Opcodes.IRETURN)
mv.visitMaxs(4, 6)
mv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PRIVATE + Opcodes.ACC_FINAL + Opcodes.ACC_STATIC, "computeAngle", "(DDDDDDDD)D", None, None)
mv.visitCode()
mv.visitVarInsn(Opcodes.DLOAD, 6)
mv.visitMethodInsn(Opcodes.INVOKESTATIC, "java/lang/Math", "sqrt", "(D)D")
mv.visitVarInsn(Opcodes.DSTORE, 16)
mv.visitVarInsn(Opcodes.DLOAD, 14)
mv.visitMethodInsn(Opcodes.INVOKESTATIC, "java/lang/Math", "sqrt", "(D)D")
mv.visitVarInsn(Opcodes.DSTORE, 18)
mv.visitVarInsn(Opcodes.DLOAD, 0)
mv.visitVarInsn(Opcodes.DLOAD, 8)
mv.visitInsn(Opcodes.DMUL)
mv.visitVarInsn(Opcodes.DLOAD, 2)
mv.visitVarInsn(Opcodes.DLOAD, 10)
mv.visitInsn(Opcodes.DMUL)
mv.visitInsn(Opcodes.DADD)
mv.visitVarInsn(Opcodes.DLOAD, 4)
mv.visitVarInsn(Opcodes.DLOAD, 12)
mv.visitInsn(Opcodes.DMUL)
mv.visitInsn(Opcodes.DADD)
mv.visitVarInsn(Opcodes.DSTORE, 20)
mv.visitVarInsn(Opcodes.DLOAD, 20)
mv.visitVarInsn(Opcodes.DLOAD, 16)
mv.visitVarInsn(Opcodes.DLOAD, 18)
mv.visitInsn(Opcodes.DMUL)
mv.visitInsn(Opcodes.DDIV)
mv.visitVarInsn(Opcodes.DSTORE, 22)
mv.visitVarInsn(Opcodes.DLOAD, 22)
mv.visitInsn(Opcodes.DCONST_1)
mv.visitInsn(Opcodes.DCMPL)
l0 = Label()
mv.visitJumpInsn(Opcodes.IFLE, l0)
mv.visitInsn(Opcodes.DCONST_1)
l1 = Label()
mv.visitJumpInsn(Opcodes.GOTO, l1)
mv.visitLabel(l0)
mv.visitFrame(Opcodes.F_FULL, 12, [Opcodes.DOUBLE, Opcodes.DOUBLE, Opcodes.DOUBLE, Opcodes.DOUBLE, Opcodes.DOUBLE, Opcodes.DOUBLE, Opcodes.DOUBLE, Opcodes.DOUBLE, Opcodes.DOUBLE, Opcodes.DOUBLE, Opcodes.DOUBLE, Opcodes.DOUBLE], 0, [])
mv.visitVarInsn(Opcodes.DLOAD, 22)
mv.visitLdcInsn(Double("-1.0"))
mv.visitInsn(Opcodes.DCMPG)
l2 = Label()
mv.visitJumpInsn(Opcodes.IFGE, l2)
mv.visitLdcInsn(Double("-1.0"))
mv.visitJumpInsn(Opcodes.GOTO, l1)
mv.visitLabel(l2)
mv.visitFrame(Opcodes.F_SAME, 0, None, 0, None)
mv.visitVarInsn(Opcodes.DLOAD, 22)
mv.visitLabel(l1)
mv.visitFrame(Opcodes.F_SAME1, 0, None, 1, [Opcodes.DOUBLE])
mv.visitMethodInsn(Opcodes.INVOKESTATIC, "java/lang/Math", "acos", "(D)D")
mv.visitInsn(Opcodes.DRETURN)
mv.visitMaxs(6, 24)
mv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL + Opcodes.ACC_STATIC, "fromSearch", "(Lnet/imglib2/RealLocalizable;Lnet/imglib2/RealLocalizable;DLnet/imglib2/RealLocalizable;D)Lmy/ConstellationFast;", None, None)
mv.visitCode()
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "net/imglib2/RealLocalizable", "getFloatPosition", "(I)F")
mv.visitInsn(Opcodes.F2D)
mv.visitVarInsn(Opcodes.DSTORE, 7)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitInsn(Opcodes.ICONST_1)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "net/imglib2/RealLocalizable", "getFloatPosition", "(I)F")
mv.visitInsn(Opcodes.F2D)
mv.visitVarInsn(Opcodes.DSTORE, 9)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitInsn(Opcodes.ICONST_2)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "net/imglib2/RealLocalizable", "getFloatPosition", "(I)F")
mv.visitInsn(Opcodes.F2D)
mv.visitVarInsn(Opcodes.DSTORE, 11)
mv.visitTypeInsn(Opcodes.NEW, "my/ConstellationFast")
mv.visitInsn(Opcodes.DUP)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "net/imglib2/RealLocalizable", "getFloatPosition", "(I)F")
mv.visitInsn(Opcodes.F2D)
mv.visitVarInsn(Opcodes.DLOAD, 7)
mv.visitInsn(Opcodes.DSUB)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitInsn(Opcodes.ICONST_1)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "net/imglib2/RealLocalizable", "getFloatPosition", "(I)F")
mv.visitInsn(Opcodes.F2D)
mv.visitVarInsn(Opcodes.DLOAD, 9)
mv.visitInsn(Opcodes.DSUB)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitInsn(Opcodes.ICONST_2)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "net/imglib2/RealLocalizable", "getFloatPosition", "(I)F")
mv.visitInsn(Opcodes.F2D)
mv.visitVarInsn(Opcodes.DLOAD, 11)
mv.visitInsn(Opcodes.DSUB)
mv.visitVarInsn(Opcodes.DLOAD, 2)
mv.visitVarInsn(Opcodes.ALOAD, 4)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "net/imglib2/RealLocalizable", "getFloatPosition", "(I)F")
mv.visitInsn(Opcodes.F2D)
mv.visitVarInsn(Opcodes.DLOAD, 7)
mv.visitInsn(Opcodes.DSUB)
mv.visitVarInsn(Opcodes.ALOAD, 4)
mv.visitInsn(Opcodes.ICONST_1)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "net/imglib2/RealLocalizable", "getFloatPosition", "(I)F")
mv.visitInsn(Opcodes.F2D)
mv.visitVarInsn(Opcodes.DLOAD, 9)
mv.visitInsn(Opcodes.DSUB)
mv.visitVarInsn(Opcodes.ALOAD, 4)
mv.visitInsn(Opcodes.ICONST_2)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "net/imglib2/RealLocalizable", "getFloatPosition", "(I)F")
mv.visitInsn(Opcodes.F2D)
mv.visitVarInsn(Opcodes.DLOAD, 11)
mv.visitInsn(Opcodes.DSUB)
mv.visitVarInsn(Opcodes.DLOAD, 5)
mv.visitMethodInsn(Opcodes.INVOKESTATIC, "my/ConstellationFast", "computeAngle", "(DDDDDDDD)D")
mv.visitVarInsn(Opcodes.DLOAD, 2)
mv.visitVarInsn(Opcodes.DLOAD, 5)
mv.visitInsn(Opcodes.ICONST_3)
mv.visitIntInsn(Opcodes.NEWARRAY, Opcodes.T_DOUBLE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitVarInsn(Opcodes.DLOAD, 7)
mv.visitInsn(Opcodes.DASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_1)
mv.visitVarInsn(Opcodes.DLOAD, 9)
mv.visitInsn(Opcodes.DASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_2)
mv.visitVarInsn(Opcodes.DLOAD, 11)
mv.visitInsn(Opcodes.DASTORE)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "my/ConstellationFast", "<init>", "(DDD[D)V")
mv.visitInsn(Opcodes.ARETURN)
mv.visitMaxs(18, 13)
mv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL + Opcodes.ACC_STATIC, "fromRow", "(Ljava/util/List;)Lmy/ConstellationFast;", "(Ljava/util/List<Ljava/lang/Double;>;)Lmy/ConstellationFast;", None)
mv.visitCode()
mv.visitTypeInsn(Opcodes.NEW, "my/ConstellationFast")
mv.visitInsn(Opcodes.DUP)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "get", "(I)Ljava/lang/Object;")
mv.visitTypeInsn(Opcodes.CHECKCAST, "java/lang/Double")
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "java/lang/Double", "doubleValue", "()D")
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitInsn(Opcodes.ICONST_1)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "get", "(I)Ljava/lang/Object;")
mv.visitTypeInsn(Opcodes.CHECKCAST, "java/lang/Double")
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "java/lang/Double", "doubleValue", "()D")
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitInsn(Opcodes.ICONST_2)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "get", "(I)Ljava/lang/Object;")
mv.visitTypeInsn(Opcodes.CHECKCAST, "java/lang/Double")
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "java/lang/Double", "doubleValue", "()D")
mv.visitInsn(Opcodes.ICONST_3)
mv.visitIntInsn(Opcodes.NEWARRAY, Opcodes.T_DOUBLE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitInsn(Opcodes.ICONST_3)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "get", "(I)Ljava/lang/Object;")
mv.visitTypeInsn(Opcodes.CHECKCAST, "java/lang/Double")
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "java/lang/Double", "doubleValue", "()D")
mv.visitInsn(Opcodes.DASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_1)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitInsn(Opcodes.ICONST_4)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "get", "(I)Ljava/lang/Object;")
mv.visitTypeInsn(Opcodes.CHECKCAST, "java/lang/Double")
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "java/lang/Double", "doubleValue", "()D")
mv.visitInsn(Opcodes.DASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_2)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitInsn(Opcodes.ICONST_5)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "get", "(I)Ljava/lang/Object;")
mv.visitTypeInsn(Opcodes.CHECKCAST, "java/lang/Double")
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "java/lang/Double", "doubleValue", "()D")
mv.visitInsn(Opcodes.DASTORE)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "my/ConstellationFast", "<init>", "(DDD[D)V")
mv.visitInsn(Opcodes.ARETURN)
mv.visitMaxs(13, 1)
mv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL, "asRow", "()[D", None, None)
mv.visitCode()
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "position", "Lmpicbg/models/Point;")
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "mpicbg/models/Point", "getW", "()[D")
mv.visitVarInsn(Opcodes.ASTORE, 1)
mv.visitIntInsn(Opcodes.BIPUSH, 6)
mv.visitIntInsn(Opcodes.NEWARRAY, Opcodes.T_DOUBLE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "angle", "D")
mv.visitInsn(Opcodes.DASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_1)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "len1", "D")
mv.visitInsn(Opcodes.DASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_2)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "len2", "D")
mv.visitInsn(Opcodes.DASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_3)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitInsn(Opcodes.DALOAD)
mv.visitInsn(Opcodes.DASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_4)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitInsn(Opcodes.ICONST_1)
mv.visitInsn(Opcodes.DALOAD)
mv.visitInsn(Opcodes.DASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_5)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitInsn(Opcodes.ICONST_2)
mv.visitInsn(Opcodes.DALOAD)
mv.visitInsn(Opcodes.DASTORE)
mv.visitInsn(Opcodes.ARETURN)
mv.visitMaxs(5, 2)
mv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL + Opcodes.ACC_STATIC, "csvHeader", "()[Ljava/lang/String;", None, None)
mv.visitCode()
mv.visitIntInsn(Opcodes.BIPUSH, 6)
mv.visitTypeInsn(Opcodes.ANEWARRAY, "java/lang/String")
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitLdcInsn("angle")
mv.visitInsn(Opcodes.AASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_1)
mv.visitLdcInsn("len1")
mv.visitInsn(Opcodes.AASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_2)
mv.visitLdcInsn("len2")
mv.visitInsn(Opcodes.AASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_3)
mv.visitLdcInsn("x")
mv.visitInsn(Opcodes.AASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_4)
mv.visitLdcInsn("y")
mv.visitInsn(Opcodes.AASTORE)
mv.visitInsn(Opcodes.DUP)
mv.visitInsn(Opcodes.ICONST_5)
mv.visitLdcInsn("z")
mv.visitInsn(Opcodes.AASTORE)
mv.visitInsn(Opcodes.ARETURN)
mv.visitMaxs(4, 0)
mv.visitEnd()
mv = cw.visitMethod(Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL + Opcodes.ACC_STATIC, "extractFeatures", "(Ljava/util/List;Lnet/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree;DDD)Ljava/util/List;", "(Ljava/util/List<Lnet/imglib2/RealLocalizable;>;Lnet/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree<Lnet/imglib2/RealLocalizable;>;DDD)Ljava/util/List<Lmy/ConstellationFast;>;", None)
mv.visitCode()
mv.visitTypeInsn(Opcodes.NEW, "java/util/ArrayList")
mv.visitInsn(Opcodes.DUP)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "java/util/ArrayList", "<init>", "()V")
mv.visitVarInsn(Opcodes.ASTORE, 8)
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "iterator", "()Ljava/util/Iterator;")
mv.visitVarInsn(Opcodes.ASTORE, 9)
l0 = Label()
mv.visitLabel(l0)
mv.visitFrame(Opcodes.F_APPEND,2, ["java/util/List", "java/util/Iterator"], 0, None)
mv.visitVarInsn(Opcodes.ALOAD, 9)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/Iterator", "hasNext", "()Z")
l1 = Label()
mv.visitJumpInsn(Opcodes.IFEQ, l1)
mv.visitVarInsn(Opcodes.ALOAD, 9)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/Iterator", "next", "()Ljava/lang/Object;")
mv.visitTypeInsn(Opcodes.CHECKCAST, "net/imglib2/RealLocalizable")
mv.visitVarInsn(Opcodes.ASTORE, 10)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitVarInsn(Opcodes.ALOAD, 10)
mv.visitVarInsn(Opcodes.DLOAD, 2)
mv.visitInsn(Opcodes.ICONST_1)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "net/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree", "search", "(Lnet/imglib2/RealLocalizable;DZ)V")
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "net/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree", "numNeighbors", "()I")
mv.visitVarInsn(Opcodes.ISTORE, 11)
mv.visitVarInsn(Opcodes.ILOAD, 11)
mv.visitInsn(Opcodes.ICONST_2)
l2 = Label()
mv.visitJumpInsn(Opcodes.IF_ICMPLE, l2)
mv.visitInsn(Opcodes.ICONST_0)
mv.visitVarInsn(Opcodes.ISTORE, 12)
mv.visitVarInsn(Opcodes.ILOAD, 11)
mv.visitInsn(Opcodes.ICONST_2)
mv.visitInsn(Opcodes.ISUB)
mv.visitVarInsn(Opcodes.ISTORE, 13)
mv.visitVarInsn(Opcodes.ILOAD, 11)
mv.visitInsn(Opcodes.ICONST_1)
mv.visitInsn(Opcodes.ISUB)
mv.visitVarInsn(Opcodes.ISTORE, 14)
l3 = Label()
mv.visitLabel(l3)
mv.visitFrame(Opcodes.F_FULL, 12, ["java/util/List", "net/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree", Opcodes.DOUBLE, Opcodes.DOUBLE, Opcodes.DOUBLE, "java/util/List", "java/util/Iterator", "net/imglib2/RealLocalizable", Opcodes.INTEGER, Opcodes.INTEGER, Opcodes.INTEGER, Opcodes.INTEGER], 0, [])
mv.visitVarInsn(Opcodes.ILOAD, 13)
mv.visitJumpInsn(Opcodes.IFLE, l2)
mv.visitVarInsn(Opcodes.DLOAD, 6)
mv.visitVarInsn(Opcodes.ILOAD, 12)
mv.visitInsn(Opcodes.I2D)
mv.visitInsn(Opcodes.DCMPL)
l4 = Label()
mv.visitJumpInsn(Opcodes.IFNE, l4)
mv.visitJumpInsn(Opcodes.GOTO, l2)
mv.visitLabel(l4)
mv.visitFrame(Opcodes.F_SAME, 0, None, 0, None)
mv.visitVarInsn(Opcodes.ALOAD, 10)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitVarInsn(Opcodes.ILOAD, 13)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "net/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree", "getPosition", "(I)Lnet/imglib2/RealLocalizable;")
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitVarInsn(Opcodes.ILOAD, 13)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "net/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree", "getSquareDistance", "(I)D")
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitVarInsn(Opcodes.ILOAD, 14)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "net/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree", "getPosition", "(I)Lnet/imglib2/RealLocalizable;")
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitVarInsn(Opcodes.ILOAD, 14)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL, "net/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree", "getSquareDistance", "(I)D")
mv.visitMethodInsn(Opcodes.INVOKESTATIC, "my/ConstellationFast", "fromSearch", "(Lnet/imglib2/RealLocalizable;Lnet/imglib2/RealLocalizable;DLnet/imglib2/RealLocalizable;D)Lmy/ConstellationFast;")
mv.visitVarInsn(Opcodes.ASTORE, 15)
mv.visitVarInsn(Opcodes.ALOAD, 15)
mv.visitFieldInsn(Opcodes.GETFIELD, "my/ConstellationFast", "angle", "D")
mv.visitVarInsn(Opcodes.DLOAD, 4)
mv.visitInsn(Opcodes.DCMPL)
l5 = Label()
mv.visitJumpInsn(Opcodes.IFLT, l5)
mv.visitIincInsn(12, 1)
mv.visitVarInsn(Opcodes.ALOAD, 8)
mv.visitVarInsn(Opcodes.ALOAD, 15)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/List", "add", "(Ljava/lang/Object;)Z")
mv.visitInsn(Opcodes.POP)
mv.visitLabel(l5)
mv.visitFrame(Opcodes.F_SAME, 0, None, 0, None)
mv.visitIincInsn(13, -1)
mv.visitIincInsn(14, -1)
mv.visitJumpInsn(Opcodes.GOTO, l3)
mv.visitLabel(l2)
mv.visitFrame(Opcodes.F_FULL, 7, ["java/util/List", "net/imglib2/neighborsearch/RadiusNeighborSearchOnKDTree", Opcodes.DOUBLE, Opcodes.DOUBLE, Opcodes.DOUBLE, "java/util/List", "java/util/Iterator"], 0, [])
mv.visitJumpInsn(Opcodes.GOTO, l0)
mv.visitLabel(l1)
mv.visitFrame(Opcodes.F_CHOP,1, None, 0, None)
mv.visitVarInsn(Opcodes.ALOAD, 8)
mv.visitInsn(Opcodes.ARETURN)
mv.visitMaxs(7, 16)
mv.visitEnd()
cw.visitEnd()
if not classloader:
classloader = CustomClassLoader()
return classloader.defineClass("my/ConstellationFast", cw.toByteArray())
def initClass(
name,
signature=None,
class_parameters=[], # list of tuples like [("I", UnsignedByteType), ("O", FloatType)]
java_version=Opcodes.V1_8,
access=Opcodes.ACC_PUBLIC,
superclass=Object,
superclass_parameters=[], # list of strings like ["I", "O"]
superclass_prefixes=[], # list of strings like ['+', ''] where '+' means e.g. <? extends FloatType>
interfaces=[],
interfaces_parameters={}, # dict of class vs class or parameters like {Converter: ["I", "O"]}
with_default_constructor=True):
""" Returns a ClassWriter with the class already initialized.
An example of a class signature. This class declaration:
public class UnsignedByteToFloatConverter<I extends UnsignedByte, O extends FloatType>
implements Converter<I, O>
... has this signature:
<I:Lnet/imglib2/type/numeric/integer/UnsignedByteType;O:Lnet/imglib2/type/numeric/real/FloatType;>Ljava/lang/Object;Lnet/imglib2/converter/Converter<TI;TO;>;
First the two class parameter types I and O, which extend UnsignedByteType and FloatType, respectively:
<I:Lnet/imglib2/type/numeric/integer/UnsignedByteType;OLnet/imglib2/type/numeric/real/FloatType;>
Then the superclass, which could also be parametrized (with parameter types between <>,
but not in this case where it is Object (the default):
Ljava/lang/Object;
Then the interface, if any; in this case Converter, parametrized with I and O:
Lnet/imglib2/converter/Converter<TI;TO;>;
Notice each class name starts with 'L' and ends with ';', whereas
parameters types start with 'T' followed by string of alphabetic characters
(often just one like "TI" or "TO").
A way to compute the fully qualified class names for the signature by
using the Type.getInternalName from the org.objectweb.asm package:
class_signature = "<I:L%s;O:L%s;>L%s;L%s<TI;TO;>;" % \
tuple(imap(Type.getInternalName, (UnsignedByteType, FloatType, Object, Converter)))
"""
if not signature:
# Construct the signature
# 1. Class parameter types, if any
if len(class_parameters) > 0:
p = "<" + "".join("%s:L%s;" % (t, Type.getInternalName(classname))
for t, classname in class_parameters) + ">"
else:
p = ""
# 2. Superclass and its parameter types, if any
sp = "L%s;" % Type.getInternalName(superclass)
if len(superclass_parameters) > 0:
sp += "<" + "".join("T%s;" % t
for t in superclass_parameters) + ">"
# 3. Interfaces and their parameter types, if any
ips = []
for interface in interfaces:
ip = "L%s" % Type.getInternalName(interface)
types = interfaces_parameters.get(interface, None)
if types:
ip += "<" + "".join("%s" % makeType(t) for t in types) + ">"
ip += ";"
ips.append(ip)
signature = p + sp + "".join(ips)
print "class '%s' signature:\n%s" % (name, signature)
cw = ClassWriter(ClassWriter.COMPUTE_FRAMES)
cw.visit(
java_version, # java version
access, # default to public
name, # package and class name
signature, # signature
Type.getInternalName(superclass), # superclass
map(Type.getInternalName, interfaces)) # array or list of interfaces
if with_default_constructor:
initConstructor(cw, superclass=superclass, default=True)
return cw
class_object = Type.getInternalName(Object)
# Type I for UnsignedByteType
# Type O for FloatType
# Object for superclass
# Converter<I, O> for interface
class_signature = "<I:L%s;O:L%s;>L%s;L%s<TI;TO;>;" % \
tuple(imap(Type.getInternalName, (UnsignedByteType, FloatType, Object, Converter)))
print class_signature
# Two arguments, one parameter for each: one for I, and another for O
# void return type: V
method_signature = "(TI;TO;)V;"
cw = ClassWriter(ClassWriter.COMPUTE_FRAMES)
cw.visit(Opcodes.V1_8, # java version
Opcodes.ACC_PUBLIC, # public class
class_name, # package and class name
class_signature, # signature (None means not generic)
class_object, # superclass
[Type.getInternalName(Converter)]) # array of interfaces
# Default constructor
constructor = cw.visitMethod(Opcodes.ACC_PUBLIC, # public
"<init>", # method name
"()V", # descriptor
None, # signature
None) # Exceptions (array of String)
# ... has to invoke the super() for Object
def makeCompositeToRealConverter(reducer_class=Math,
reducer_method="max",
reducer_method_signature="(DD)D",
classloader=None):
"""
Takes a RealComposite as input and converts it into a RealType,
by reducing the list of RealType in RealComposite using a specified function.
reducer_class: e.g. Math
reducer_method: e.g. "max", a method that takes two doubles and returns one.
reducer_method_signature: e.g. "(DD)D", two double arguments, returning a double.
"""
class_name = "my/CompositeToRealConverterVia_" + reducer_class.getName(
).replace('.', '_') + '_' + reducer_method
# Turn e.g. class Math into "java/lang/Math":
reducer_class_string = reducer_class.getName().replace('.', '/')
cw = ClassWriter(0)
cw.visit(
52, Opcodes.ACC_PUBLIC + Opcodes.ACC_SUPER, class_name,
"<S::Lnet/imglib2/type/numeric/RealType<TS;>;T::Lnet/imglib2/type/numeric/RealType<TT;>;>Ljava/lang/Object;Lnet/imglib2/converter/Converter<Lnet/imglib2/view/composite/RealComposite<TS;>;TT;>;",
"java/lang/Object", ["net/imglib2/converter/Converter"])
mv = cw.visitMethod(Opcodes.ACC_PUBLIC, "<init>", "()V", None, None)
mv.visitCode()
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitMethodInsn(Opcodes.INVOKESPECIAL, "java/lang/Object", "<init>",
"()V", False)
mv.visitInsn(Opcodes.RETURN)
mv.visitMaxs(1, 1)
mv.visitEnd()
mv = cw.visitMethod(
Opcodes.ACC_PUBLIC + Opcodes.ACC_FINAL, "convert",
"(Lnet/imglib2/view/composite/RealComposite;Lnet/imglib2/type/numeric/RealType;)V",
"(Lnet/imglib2/view/composite/RealComposite<TS;>;TT;)V", None)
mv.visitCode()
mv.visitVarInsn(Opcodes.ALOAD, 2)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE,
"net/imglib2/type/numeric/RealType", "setZero", "()V",
True)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitMethodInsn(Opcodes.INVOKEVIRTUAL,
"net/imglib2/view/composite/RealComposite", "iterator",
"()Ljava/util/Iterator;", False)
mv.visitVarInsn(Opcodes.ASTORE, 4)
l0 = Label()
mv.visitJumpInsn(Opcodes.GOTO, l0)
l1 = Label()
mv.visitLabel(l1)
mv.visitFrame(Opcodes.F_FULL, 5, [
class_name, "net/imglib2/view/composite/RealComposite",
"net/imglib2/type/numeric/RealType", Opcodes.TOP, "java/util/Iterator"
], 0, [])
mv.visitVarInsn(Opcodes.ALOAD, 4)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/Iterator", "next",
"()Ljava/lang/Object;", True)
mv.visitTypeInsn(Opcodes.CHECKCAST, "net/imglib2/type/numeric/RealType")
mv.visitVarInsn(Opcodes.ASTORE, 3)
mv.visitVarInsn(Opcodes.ALOAD, 2)
mv.visitVarInsn(Opcodes.ALOAD, 3)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE,
"net/imglib2/type/numeric/RealType", "getRealDouble",
"()D", True)
mv.visitVarInsn(Opcodes.ALOAD, 2)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE,
"net/imglib2/type/numeric/RealType", "getRealDouble",
"()D", True)
mv.visitMethodInsn(Opcodes.INVOKESTATIC, reducer_class_string,
reducer_method, reducer_method_signature, False)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE,
"net/imglib2/type/numeric/RealType", "setReal", "(D)V",
True)
mv.visitLabel(l0)
mv.visitFrame(Opcodes.F_SAME, 0, None, 0, None)
mv.visitVarInsn(Opcodes.ALOAD, 4)
mv.visitMethodInsn(Opcodes.INVOKEINTERFACE, "java/util/Iterator",
"hasNext", "()Z", True)
mv.visitJumpInsn(Opcodes.IFNE, l1)
mv.visitInsn(Opcodes.RETURN)
mv.visitMaxs(5, 5)
mv.visitEnd()
mv = cw.visitMethod(
Opcodes.ACC_PUBLIC + Opcodes.ACC_BRIDGE + Opcodes.ACC_SYNTHETIC,
"convert", "(Ljava/lang/Object;Ljava/lang/Object;)V", None, None)
mv.visitCode()
mv.visitVarInsn(Opcodes.ALOAD, 0)
mv.visitVarInsn(Opcodes.ALOAD, 1)
mv.visitTypeInsn(Opcodes.CHECKCAST,
"net/imglib2/view/composite/RealComposite")
mv.visitVarInsn(Opcodes.ALOAD, 2)
mv.visitTypeInsn(Opcodes.CHECKCAST, "net/imglib2/type/numeric/RealType")
mv.visitMethodInsn(
Opcodes.INVOKEVIRTUAL, class_name, "convert",
"(Lnet/imglib2/view/composite/RealComposite;Lnet/imglib2/type/numeric/RealType;)V",
False)
mv.visitInsn(Opcodes.RETURN)
mv.visitMaxs(3, 3)
mv.visitEnd()
cw.visitEnd()
if not classloader:
classloader = CustomClassLoader()
return classloader.defineClass(class_name, cw.toByteArray())
def defineConverter(
fromType,
toType,
classname="",
fromMethod="getRealFloat",
fromMethodReturnType="F", # e.g. "F" for native float
toMethod="setReal",
toMethodArgType="F"):
""" Create a new Converter fromType toType.
fromType: the net.imglib2.Type to see as transformed into toType.
toType: the net.imglib2.Type to see.
classname: optional, will be made up if not defined.
fromMethod: the method for reading the value from the fromType.
Defaults to getRealFloat form the RealType interface.
fromMethodReturnType: the return type of the method, e.g., "F" for native float or e.g., UnsignedByteType for class.
toMethod: the method for setting the value to the toType.
Defaults to setReal from the RealType interface.
toMethodReturnType: like fromMethodReturnType.
"""
if "" == classname:
classname = "asm/converters/%sTo%sConverter" % (
fromType.getSimpleName(), toType.getSimpleName())
class_object = Type.getInternalName(Object)
# Type I for fromType
# Type O for toType
# Object for superclass
# Converter<I, O> for interface
class_signature = "<I:L%s;O:L%s;>L%s;L%s<TI;TO;>;" % \
tuple(imap(Type.getInternalName, (fromType, toType, Object, Converter)))
# Two arguments, one parameter for each: one for I, and another for O
# void return type: V
method_signature = "(TI;TO;)V;"
cw = ClassWriter(ClassWriter.COMPUTE_FRAMES)
cw.visit(
Opcodes.V1_8, # java version
Opcodes.ACC_PUBLIC, # public class
classname, # package and class name
class_signature, # signature (None means not generic)
class_object, # superclass
[Type.getInternalName(Converter)]) # array of interfaces
# Default constructor
constructor = cw.visitMethod(
Opcodes.ACC_PUBLIC, # public
"<init>", # method name
"()V", # descriptor
None, # signature
None) # Exceptions (array of String)
# ... has to invoke the super() for Object
constructor.visitCode()
constructor.visitVarInsn(
Opcodes.ALOAD,
0) # load "this" onto the stack: the first local variable is "this"
constructor.visitMethodInsn(
Opcodes.INVOKESPECIAL, # invoke an instance method (non-virtual)
class_object, # class on which the method is defined
"<init>", # name of the method (the default constructor of Object)
"()V", # descriptor of the default constructor of Object
False) # not an interface
constructor.visitInsn(Opcodes.RETURN) # End the constructor method
constructor.visitMaxs(
1,
1) # The maximum number of stack slots (1) and local vars (1: "this")
# The convert(I, O) method from the Converter interface
method = cw.visitMethod(
Opcodes.ACC_PUBLIC, # public method
"convert", # name of the interface method we are implementing
"(L%s;L%s;)V" % tuple(imap(Type.getInternalName,
(fromType, toType))), # descriptor
"(TI;TO;)", # signature
None) # Exceptions (array of String)
method.visitCode()
method.visitVarInsn(Opcodes.ALOAD,
2) # Load second argument onto stack: the FloatType
method.visitVarInsn(
Opcodes.ALOAD,
1) # Load first argument onto stack: the UnsignedByteType
method.visitMethodInsn(
Opcodes.INVOKEVIRTUAL,
Type.getInternalName(fromType),
fromMethod, # e.g. "getRealFloat"
"()%s" %
fromMethodReturnType, # descriptor: no arguments # e.g. "F" for native float
False)
method.visitMethodInsn(
Opcodes.INVOKEVIRTUAL,
Type.getInternalName(toType),
toMethod, # e.g. "setReal"
"(%s)V" % toMethodArgType, # e.g. "F" for native float
False)
method.visitInsn(Opcodes.RETURN)
method.visitMaxs(
2, 3
) # 2 stack slots: the two ALOAD calls. And 3 local variables: this, and two method arguments.
method.visitEnd()
# Now the public volatile bridge, because the above method uses generics.
# Does not seem to be necessary to run the convert method.
# This method takes an (Object, Object) as arguments and casts them to the expected types,
# and then invokes the above typed version of the "convert" method.
# The only reason I am adding it here is because I saw it when I printed the class byte code,
# after writing the converter in java and using this command to see the asm code:
# $ java -classpath /home/albert/Programming/fiji-new/Fiji.app/jars/imglib2-5.1.0.jar:/home/albert/Programming/fiji-new/Fiji.app/jars/asm-5.0.4.jar://home/albert/Programming/fiji-new/Fiji.app/jars/asm-util-4.0.jar org.objectweb.asm.util.Textifier my/UnsignedByteToFloatConverter.class
bridge = cw.visitMethod(
Opcodes.ACC_PUBLIC | Opcodes.ACC_SYNTHETIC | Opcodes.ACC_BRIDGE,
"convert", "(L%s;L%s;)V" % tuple(repeat(class_object, 2)),
"(L%s;L%s;)V" % tuple(repeat(class_object, 2)), None)
bridge.visitCode()
bridge.visitVarInsn(Opcodes.ALOAD, 0)
bridge.visitVarInsn(Opcodes.ALOAD, 1)
bridge.visitTypeInsn(Opcodes.CHECKCAST, Type.getInternalName(fromType))
bridge.visitVarInsn(Opcodes.ALOAD, 2)
bridge.visitTypeInsn(Opcodes.CHECKCAST, Type.getInternalName(toType))
bridge.visitMethodInsn(
Opcodes.INVOKEVIRTUAL,
classname,
"convert",
"(L%s;L%s;)V" % tuple(imap(Type.getInternalName,
(fromType, toType))), # descriptor
False)
bridge.visitInsn(Opcodes.RETURN)
bridge.visitMaxs(3, 3)
bridge.visitEnd()
loader = CustomClassLoader()
converterClass = loader.defineClass(classname, cw.toByteArray())
return converterClass