def test_bedrecord__accessors__3_fields():
record = BEDRecord("my_contig\t12\t345")
assert record.contig == "my_contig"
assert record.start == 12
assert record.end == 345
with pytest.raises(IndexError):
record.name()
with pytest.raises(IndexError):
record.score()
with pytest.raises(IndexError):
record.strand()
def test_bedrecord__setters__type_errors():
record = BEDRecord("my_contig\t12\t345\tname\t0\t+")
with pytest.raises(ValueError):
record.contig = 17
with pytest.raises(ValueError):
record.start = "foo"
with pytest.raises(ValueError):
record.end = "foo"
with pytest.raises(ValueError):
record.name = 17.3
with pytest.raises(ValueError):
record.score = "foo"
with pytest.raises(ValueError):
record.strand = "foo"
def test_bedrecord__setters__unset_fields__at_end():
record = BEDRecord("my_contig\t12\t345")
record.name = "my_region"
assert_equal(record.name, "my_region")
record.score = -13
assert_equal(record.score, -13)
record.strand = '-'
assert_equal(record.strand, '-')
assert_equal(str(record), "my_contig\t12\t345\tmy_region\t-13\t-")
assert_equal(
repr(record), "BEDRecord(contig='my_contig', start=12, end=345, "
"name='my_region', score=-13, strand='-')")
def test_bedrecord__setters__unset_fields__at_end():
record = BEDRecord("my_contig\t12\t345")
record.name = "my_region"
assert_equal(record.name, "my_region")
record.score = -13
assert_equal(record.score, -13)
record.strand = '-'
assert_equal(record.strand, '-')
assert_equal(str(record), "my_contig\t12\t345\tmy_region\t-13\t-")
assert_equal(repr(record),
"BEDRecord(contig='my_contig', start=12, end=345, "
"name='my_region', score=-13, strand='-')")
def test_bedrecord__setters__unset_fields__at_end():
record = BEDRecord("my_contig\t12\t345")
record.name = "my_region"
assert record.name == "my_region"
record.score = -13
assert record.score == -13
record.strand = "-"
assert record.strand == "-"
assert str(record) == "my_contig\t12\t345\tmy_region\t-13\t-"
assert (
repr(record) == "BEDRecord(contig='my_contig', start=12, end=345, "
"name='my_region', score=-13, strand='-')"
)