def write_mendeley_papers_to_database(documents): '''This function will take a document list and update the Publication model in the database. To call this you have to get a document list, for example from get_mendeley_authored_documents() the output of that function is then passed to this function.''' for key in documents.keys(): document_dict = { 'mendeley_url': documents[key]['mendeley_url'], 'title': documents[key]['title'], 'journal': documents[key]['published_in'], 'id': documents[key]['id'], 'doi': documents[key]['doi'], 'pmid': documents[key]['pmid'], 'issn': documents[key]['issn'], 'year': documents[key]['year'], 'volume': documents[key]['volume'], 'issue': documents[key]['issue'], 'pages': documents[key]['pages'], 'abstract': documents[key]['abstract'], 'type': documents[key]['type'] } paper = Publication(document_dict) paper.save() for author in documents[key]['authors']: paper.author_set.add('first_name' =author['forename'], 'last_name' =[author]['surname'])
def test_paper_title_slug(self): '''This tests the title_slug field of a :class:`~papers.models.Publication`.''' test_publication = Publication(title='Test Publication.', laboratory_paper=True, interesting_paper=False, preprint=False) test_publication.save() self.assertEqual(test_publication.title_slug, "test-publication")
def test_create_new_paper_minimum(self): '''This test creates a :class:`~papers.models.Publication` with the required information only.''' test_publication = Publication(title='Test Publication.', laboratory_paper=True, interesting_paper=False, preprint=False) test_publication.save() self.assertEqual(test_publication.pk, 3)
def test_full_pmcid(self): '''This tests that a correct full PMCID can be generated for a :class:`~papers.models.Publication`.''' test_publication = Publication(title="Test Publication", pmcid="12345", laboratory_paper=True, interesting_paper=False, preprint=False) test_publication.save() self.assertEqual(test_publication.full_pmcid(), 'PMC12345')
def write_mendeley_papers_to_database(documents): '''This function will take a document list and update the Publication model in the database. To call this you have to get a document list, for example from get_mendeley_authored_documents() the output of that function is then passed to this function.''' for key in documents.keys(): document_dict = {'mendeley_url' : documents[key]['mendeley_url'], 'title' : documents[key]['title'], 'journal' : documents[key]['published_in'], 'id' : documents[key]['id'], 'doi' : documents[key]['doi'], 'pmid' : documents[key]['pmid'], 'issn' : documents[key]['issn'], 'year' : documents[key]['year'], 'volume' : documents[key]['volume'], 'issue' : documents[key]['issue'], 'pages' : documents[key]['pages'], 'abstract' : documents[key]['abstract'], 'type' : documents[key]['type']} paper = Publication(document_dict) paper.save() for author in documents[key]['authors']: paper.author_set.add('first_name'=author['forename'], 'last_name'=[author]['surname'])
def test_full_pmcid(self): '''This tests that a correct full PMCID can be generated for a :class:`~papers.models.Publication`.''' test_publication = Publication(title="Test Publication", pmcid = "12345", laboratory_paper=True, interesting_paper=False, preprint=False) test_publication.save() self.assertEqual(test_publication.full_pmcid(), 'PMC12345')
def test_paper_absolute_url(self): '''This tests the title_slug field of a :class:`~papers.models.Publication`.''' test_publication = Publication(title='Test Publication', laboratory_paper=True, interesting_paper=False, preprint=False) test_publication.save() self.assertEqual(test_publication.get_absolute_url(), "/papers/test-publication")