def test_divided_to_species_predicted_names(self):
p = ParserBlast("divided_to_species.xml")
p.generate_xml_tree()
p.group_to_classes()
p.divide_to_species_predicted()
keys = sorted(
['Pan troglodytes', "Pongo abelii", "Nomascus leucogenys"])
self.assertListEqual(sorted(p.name_of_species_predicted), keys)
def test_divided_to_species_predicted_count(self):
p = ParserBlast("divided_to_species.xml")
p.generate_xml_tree()
p.group_to_classes()
p.divide_to_species_predicted()
count = 0
for i in p.species_predicted.keys():
count += len(p.species_predicted[i])
self.assertEqual(count, 4)
def test_divided_to_species_predicted_number_uniq(self):
p = ParserBlast("divided_to_species.xml")
p.generate_xml_tree()
p.group_to_classes()
p.divide_to_species_predicted()
self.assertTrue(len(p.species_predicted) == 3)