def rtc_runner(rtc): """ :type rtc: pbcommand.models.ResolvedToolContract :return: """ # the input file is just a sentinel file return run_main_gather_fastq_contigset(rtc.task.input_files[0], rtc.task.output_files[0], rtc.task.chunk_key)
def args_runner(args): return run_main_gather_fastq_contigset(args.cjson_in, args.fastq_out, args.chunk_key)