def __init__(self, data_type, ErMagicCheck, grid, belongs_to):
"""
take: data_type (string), ErMagicCheck (top level class object for ErMagic steps 1-6),
grid (grid object), belongs_to (list of options for data object to belong to, i.e. locations for the site Menus)
"""
# if controlled vocabularies haven't already been grabbed from earthref
# do so now
if not any(vocab.vocabularies):
vocab.get_stuff()
self.data_type = data_type
self.check = ErMagicCheck # check is top level class object for entire ErMagic steps 1-6
self.grid = grid
self.window = grid.Parent # parent window in which grid resides
self.belongs_to = []
# belongs_to can either be a list of strings OR a list of Pmag_objects
if belongs_to:
for item in belongs_to:
try:
self.belongs_to.append(item.name)
except AttributeError:
self.belongs_to.append(item)
#self.headers = headers
self.selected_col = None
self.selection = [] # [(row, col), (row, col)], sequentially down a column
self.dispersed_selection = [] # [(row, col), (row, col)], not sequential
self.col_color = None
self.colon_delimited_lst = ['specimen_type', 'specimen_class', 'specimen_lithology',
'sample_type', 'sample_class', 'sample_lithology',
'site_type', 'site_class', 'site_lithology',
'er_specimen_names', 'er_sample_names', 'er_site_names',
'er_location_names', 'magic_method_codes', 'magic_method_codes++']
self.InitUI()
def validate_for_controlled_vocab(key, value, complete_ref):
if not any(vocab.vocabularies):
vocab.get_stuff()
#
cv = False
stripped_key = ''
for level in ['specimen_', 'sample_', 'site_']:
if key.startswith(level):
#stripped_key = key.strip(level)
stripped_key = key[len(level):]
break
#print 'key', key
#print 'stripped_key', stripped_key
if key in vocab.possible_vocabularies or key in vocab.vocabularies:
cv = True
elif stripped_key in vocab.possible_vocabularies or stripped_key in vocab.vocabularies:
cv = True
key = stripped_key
#return key
#if there is a controlled vocabulary for the given header,
# check and see if all values provided are legitimate
if cv:
# make sure colon-delimited lists are split
values = value.split(':')
values = [v.strip() for v in values]
#print 'key', key
#print 'values', values
# if we don't have the options for the needed controlled vocabulary,
# fetch them from earthref
if key not in vocab.vocabularies:
add = vocab.get_controlled_vocabularies((key,))
vocab.vocabularies = pd.concat((vocab.vocabularies, add[0]))
## for each value from a controlled vocabulary header,
## make sure it is within the controlled vocabulary list
## and that the value is not null
for val in values:
if val not in vocab.vocabularies[key] and val:
if isinstance(vocab.vocabularies[key], dict):
if val not in vocab.vocabularies[key][val[0].upper()]:
return key
else:
return key
def __init__(self, contribution, WD=None, frame_name="grid frame",
panel_name="grid panel", parent=None):
self.parent = parent
wx.GetDisplaySize()
title = 'Edit {} data'.format(panel_name)
#wx.Frame.__init__(self, parent=parent, id=wx.ID_ANY, name=frame_name, title=title)
#wx.ScrolledWindow.__init__(self, parent=parent, id=wx.ID_ANY, name=frame_name)#, title=title)
super(GridFrame, self).__init__(parent=parent, id=wx.ID_ANY, name=frame_name, title=title)
# if controlled vocabularies haven't already been grabbed from earthref
# do so now
if not any(vocab.vocabularies):
vocab.get_stuff()
self.remove_cols_mode = False
self.deleteRowButton = None
self.selected_rows = set()
self.contribution = contribution
self.panel = wx.Panel(self, name=panel_name, size=wx.GetDisplaySize())
self.grid_type = panel_name
if self.parent:
self.Bind(wx.EVT_WINDOW_DESTROY, self.parent.Parent.on_close_grid_frame)
if self.grid_type == 'age':
ancestry_ind = self.contribution.ancestry.index(self.er_magic.age_type)
self.child_type = self.contribution.ancestry[ancestry_ind-1]
self.parent_type = self.contribution.ancestry[ancestry_ind+1]
else:
try:
child_ind = self.contribution.ancestry.index(self.grid_type) - 1
self.child_type = self.contribution.ancestry[child_ind]
parent_ind = self.er_magic.contribution.index(self.grid_type) + 1
self.parent_type = self.contribution.ancestry[parent_ind]
except ValueError:
self.child_type = None
self.parent_type = None
self.WD = WD
self.InitUI()
def __init__(self, parent):
self.box = wx.StaticBox(parent, wx.ID_ANY, "")
super(MethodCodeDemystifier, self).__init__(self.box, orient=wx.VERTICAL)
grid_sizer = wx.GridSizer(0, 5, 3, 3)
if not any(vocab.code_types):
vocab.get_stuff()
types = vocab.code_types.index
types = vocab.code_types['label']
type_ind = vocab.code_types.index
for method_type in types:
name = str(vocab.code_types[vocab.code_types.label == method_type].index[0])
# make button & add to sizer
btn = wx.Button(parent, label=method_type, name=name)
grid_sizer.Add(btn, 0, wx.EXPAND)
parent.Bind(wx.EVT_BUTTON, self.on_code_button, btn)
self.Add(grid_sizer)
width, height = grid_sizer.Size
self.descriptions = wx.TextCtrl(parent, size=(800, 140), style=wx.TE_READONLY|wx.TE_MULTILINE|wx.HSCROLL)#, value=init_text)
self.Add(self.descriptions, flag=wx.ALIGN_CENTRE|wx.ALL, border=10)
self.on_code_button(None, 'anisotropy_estimation')
