def tournamentSelect(pop, SCORES, scorefunc, scoreparams, T, N): """ Return N individuals from the population by conducting tournaments of size T. Each tournament has exactly one winner """ from population import functify # from population import score answer = [] for _ in xrange(N): gladiators = sample(pop, T) for g in gladiators: if functify(g) not in SCORES: SCORES[functify(g)] = scorefunc(g, *scoreparams) answer.append(max(gladiators, key=lambda p: SCORES[functify(p)])) return answer
def getRouletteWheel(population, SCORES, scorefunc, scoreparams):
""" Return a fitness-proportional roulette wheel for the population"""
from population import functify
wheel={}
top = 0.0
for p in population:
if functify(p) not in SCORES: SCORES[functify(p)] = scorefunc(p, *scoreparams)
totalscore = abs(sum((SCORES[functify(p)] for p in population)))
for p in population:
fit = SCORES[functify(p)]/totalscore
wheel[(top, top+fit)] = clone(p)
top += fit
# print 'returning wheel' ##
return wheel
def headlessChickenMut(indiv, SCORES, F, T, scorefunc, scoreparams, maxheight):
from population import Node, generateFull, generateGrow, functify
height = getHeight(indiv)
chicken, rooster = generateFull(F, T, Node(), height), generateGrow(F, T, Node(), height, maxheight)
c1, c2 = crossover(indiv, chicken, maxheight)
c3, c4 = crossover(indiv, rooster, maxheight)
c5, c6 = crossover(chicken, rooster, maxheight)
for c in [c1, c2, c3, c4, c5, c6]:
if functify(c) not in SCORES:
SCORES[functify(c)] = scorefunc(c, *scoreparams)
return sorted([c1, c2, c3, c4, c5, c6], key=lambda f: SCORES[functify(c)], reverse=True)
#if __name__ == "__main__":
# print 'starting'
#
# from cPickle import load
# n = load(open('testbed'))
#
# print GCP(n,7)
#
# print 'done'