def test_instantiation_from_config(name, parameters):
cp = WorkflowConfigParser()
cp.add_section('test')
ifo_name = 'ifo'
cp.set('test', '{}_model'.format(ifo_name), name)
for key in parameters:
cp.set('test', '{}_{}'.format(ifo_name, key), parameters[key])
from_config = calibration.Recalibrate.from_config(cp, ifo_name, 'test')
assert all([from_config.name == name, from_config.ifo_name == ifo_name])
def test_instantiation_from_config(self):
parameters = dict(minimum_frequency='10', maximum_frequency='1024',
n_points='5')
cp = WorkflowConfigParser()
cp.add_section('test')
ifo_name = 'ifo'
cp.set('test', '{}_model'.format(ifo_name), 'cubic_spline')
for key in parameters:
cp.set('test', '{}_{}'.format(ifo_name, key), parameters[key])
from_config = strain.read_model_from_config(cp, ifo_name, 'test')
self.assertTrue(all([from_config.name == 'cubic_spline',
from_config.ifo_name == ifo_name]))
def test_instantiation_from_config(self):
parameters = dict(minimum_frequency='10',
maximum_frequency='1024',
n_points='5')
cp = WorkflowConfigParser()
cp.add_section('test')
ifo_name = 'ifo'
cp.set('test', '{}_model'.format(ifo_name), 'cubic_spline')
for key in parameters:
cp.set('test', '{}_{}'.format(ifo_name, key), parameters[key])
from_config = strain.read_model_from_config(cp, ifo_name, 'test')
self.assertTrue(
all([
from_config.name == 'cubic_spline',
from_config.ifo_name == ifo_name
]))
def __init__(self, args, name):
"""
Create a pycbc workflow
Parameters
----------
args : argparse.ArgumentParser
The command line options to initialize a CBC workflow.
"""
super(Workflow, self).__init__(name)
# Parse ini file
self.cp = WorkflowConfigParser.from_args(args)
# Dump the parsed config file
ini_file = os.path.abspath(self.name + '_parsed.ini')
if not os.path.isfile(ini_file):
fp = open(ini_file, 'w')
self.cp.write(fp)
fp.close()
else:
logging.warn("Cowardly refusing to overwrite %s." %(ini_file))
# Set global values
start_time = int(self.cp.get("workflow", "start-time"))
end_time = int(self.cp.get("workflow", "end-time"))
self.analysis_time = segments.segment([start_time, end_time])
# Set the ifos to analyse
ifos = []
for ifo in self.cp.options('workflow-ifos'):
ifos.append(ifo.upper())
self.ifos = ifos
self.ifos.sort(key=str.lower)
self.ifo_string = ''.join(self.ifos)
# Set up input and output file lists for workflow
self._inputs = FileList([])
self._outputs = FileList([])