コード例 #1
0
    def test_fs_interp2(self):
        for mod in AVAILABLE_MOD:
            # parameters of signal
            T_x = T_y = mod.pi
            N_FSx = N_FSy = 5
            T_cx = T_cy = math.e

            # And the kernel's FS coefficients.
            diric_FS = mod.outer(
                dirichlet_fs(N_FSx, T_x, T_cx, mod=mod), dirichlet_fs(N_FSy, T_y, T_cy, mod=mod)
            )

            # Generate interpolated signal
            a_x, b_x = T_cx + (T_x / 2) * mod.r_[-1, 1]
            a_y, b_y = T_cy + (T_y / 2) * mod.r_[-1, 1]
            M_x = M_y = 6
            diric_sig = fs_interpn(diric_FS, T=[T_x, T_y], a=[a_x, a_y], b=[b_x, b_y], M=[M_x, M_y])

            # Compare with theoretical result.
            sample_points_x = a_x + (b_x - a_x) / (M_x - 1) * mod.arange(M_x)
            sample_points_y = a_y + (b_y - a_y) / (M_y - 1) * mod.arange(M_y)
            sample_points = [sample_points_x.reshape(M_x, 1), sample_points_y.reshape(1, M_y)]
            diric_sig_exact = dirichlet_2D(
                sample_points, T=[T_x, T_y], T_c=[T_cx, T_cy], N_FS=[N_FSx, N_FSy]
            )
            assert mod.allclose(diric_sig, diric_sig_exact)

            # Try real version
            diric_sig_real = fs_interpn(
                diric_FS, T=[T_x, T_y], a=[a_x, a_y], b=[b_x, b_y], M=[M_x, M_y], real_x=True
            )
            assert mod.allclose(diric_sig, diric_sig_real)
コード例 #2
0
ファイル: test_ffs.py プロジェクト: imagingofthings/pyFFS
    def test_ffsn_ref(self):
        T = [1, 1]
        T_c = [0, 0]
        N_FS = [3, 3]
        N_s = [4, 3]

        for mod in AVAILABLE_MOD:

            # Sample the kernel and do the transform.
            sample_points, _ = ffsn_sample(T=T,
                                           N_FS=N_FS,
                                           T_c=T_c,
                                           N_s=N_s,
                                           mod=mod)
            diric_samples = dirichlet_2D(sample_points=sample_points,
                                         T=T,
                                         T_c=T_c,
                                         N_FS=N_FS)
            diric_FS = _ffsn(x=diric_samples, T=T, N_FS=N_FS, T_c=T_c)

            # Compare with theoretical result.
            diric_FS_exact = mod.outer(
                dirichlet_fs(N_FS[0], T[0], T_c[0], mod=mod),
                dirichlet_fs(N_FS[1], T[1], T_c[1], mod=mod),
            )
            assert mod.allclose(diric_FS[:N_FS[0], :N_FS[1]], diric_FS_exact)

            # Inverse transform.
            diric_samples_recov = _iffsn(x_FS=diric_FS,
                                         T=T,
                                         T_c=T_c,
                                         N_FS=N_FS)

            # Compare with original samples.
            assert mod.allclose(diric_samples, diric_samples_recov)
コード例 #3
0
ファイル: test_ffs.py プロジェクト: imagingofthings/pyFFS
    def test_ffsn_axes(self):
        T_x = T_y = 1
        T_cx = T_cy = 0
        N_FSx = N_FSy = 3
        N_sx, N_sy = 4, 3

        for mod in AVAILABLE_MOD:

            # Sample the kernel.
            sample_points, _ = ffsn_sample(T=[T_x, T_y],
                                           N_FS=[N_FSx, N_FSy],
                                           T_c=[T_cx, T_cy],
                                           N_s=[N_sx, N_sy],
                                           mod=mod)
            diric_samples = dirichlet_2D(sample_points=sample_points,
                                         T=[T_x, T_y],
                                         T_c=[T_cx, T_cy],
                                         N_FS=[N_FSx, N_FSy])

            # Add new dimension.
            diric_samples = diric_samples[:, mod.newaxis, :]
            axes = (0, 2)

            # Perform transform.
            diric_FS = ffsn(x=diric_samples,
                            T=[T_x, T_y],
                            T_c=[T_cx, T_cy],
                            N_FS=[N_FSx, N_FSy],
                            axes=axes)

            # Compare with theoretical result.
            diric_FS_exact = mod.outer(dirichlet_fs(N_FSx, T_x, T_cx, mod=mod),
                                       dirichlet_fs(N_FSy, T_y, T_cy, mod=mod))
            assert mod.allclose(diric_FS[:N_FSx, 0, :N_FSy], diric_FS_exact)

            # Inverse transform.
            diric_samples_recov = iffsn(x_FS=diric_FS,
                                        T=[T_x, T_y],
                                        T_c=[T_cx, T_cy],
                                        N_FS=[N_FSx, N_FSy],
                                        axes=axes)

            # Compare with original samples.
            assert mod.allclose(diric_samples, diric_samples_recov)
コード例 #4
0
ファイル: test_ffs.py プロジェクト: imagingofthings/pyFFS
    def test_ffs(self):
        T, T_c, N_FS = math.pi, math.e, 15
        N_samples = 16  # Any >= N_FS will do, but highly-composite best.

        for mod in AVAILABLE_MOD:

            # Sample the kernel and do the transform.
            sample_points, _ = ffs_sample(T, N_FS, T_c, N_samples, mod=mod)
            diric_samples = dirichlet(sample_points, T, T_c, N_FS)
            diric_FS = ffs(diric_samples, T, T_c, N_FS)

            # Compare with theoretical result.
            assert mod.allclose(diric_FS[:N_FS], dirichlet_fs(N_FS, T, T_c))

            # Inverse transform.
            diric_samples_recov = iffs(diric_FS, T, T_c, N_FS)

            # Compare with original samples.
            assert mod.allclose(diric_samples, diric_samples_recov)
コード例 #5
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    def test_fs_interp(self):
        # parameters of signal
        T, T_c, N_FS = math.pi, math.e, 15

        for mod in AVAILABLE_MOD:

            # And the kernel's FS coefficients.
            diric_FS = dirichlet_fs(N_FS, T, T_c, mod=mod)

            # Generate interpolated signal
            a, b = T_c + (T / 2) * mod.r_[-1, 1]
            M = 100  # We want lots of points.
            diric_sig = fs_interp(diric_FS, T, a, b, M)

            # Compare with theoretical result.
            t = a + (b - a) / (M - 1) * mod.arange(M)
            diric_sig_exact = dirichlet(t, T, T_c, N_FS)
            assert mod.allclose(diric_sig, diric_sig_exact)

            # Try real version
            diric_sig_real = fs_interp(diric_FS, T, a, b, M, real_x=True)
            assert mod.allclose(diric_sig, diric_sig_real)
コード例 #6
0
ファイル: fs_interp.py プロジェクト: imagingofthings/pyFFS
def profile_fs_interp(n_trials):
    print(f"\nCOMPARING FS_INTERP WITH {n_trials} TRIALS")

    # parameters of signal
    T, T_c, M = math.pi, math.e, 1000
    N_FS_vals = [11, 31, 101, 301, 1001, 3001, 10001, 30001, 100001]

    # sweep over number of interpolation points
    a, b = T_c + (T / 2) * np.r_[-1, 1]
    n_std = 0.5
    real_x = {"complex": False, "real": True}
    proc_time = dict()
    proc_time_std = dict()
    for N_FS in N_FS_vals:
        print("\nNumber of FS coefficients : {}".format(N_FS))
        proc_time[N_FS] = dict()
        proc_time_std[N_FS] = dict()

        # naive approach, apply synthesis formula
        diric_FS = dirichlet_fs(N_FS, T, T_c, mod=np)
        _key = "naive"
        timings = []
        for _ in range(n_trials):
            start_time = time.time()
            naive_interp1d(diric_FS, T, a, b, M)
            timings.append(time.time() - start_time)
        proc_time[N_FS][_key] = np.mean(timings)
        proc_time_std[N_FS][_key] = np.std(timings)
        print("-- {} : {} seconds".format(_key, proc_time[N_FS][_key]))

        # Loop through modules
        for mod in AVAILABLE_MOD:
            backend = get_module_name(mod)
            print("-- module : {}".format(backend))

            # compute FS coefficients
            diric_FS = dirichlet_fs(N_FS, T, T_c, mod=mod)

            # Loop through functions
            for _f in real_x:
                _key = "{}_{}".format(_f, backend)
                timings = []
                for _ in range(n_trials):
                    start_time = time.time()
                    fs_interp(diric_FS, T, a, b, M, real_x=real_x[_f])
                    timings.append(time.time() - start_time)
                proc_time[N_FS][_key] = np.mean(timings)
                proc_time_std[N_FS][_key] = np.std(timings)
                print("{} version : {} seconds".format(_f,
                                                       proc_time[N_FS][_key]))

    # plot results
    fig, ax = plt.subplots()
    util.comparison_plot(proc_time, proc_time_std, n_std, ax)
    ax.set_title(f"{M} samples, {n_trials} trials")
    ax.set_xlabel("Number of FS coefficients")
    fig.tight_layout()

    fname = pathlib.Path(
        __file__).resolve().parent / "profile_fs_interp_1D.png"
    fig.savefig(fname, dpi=300)