コード例 #1
0
ファイル: editing.py プロジェクト: av-hub/pymol-testing
 def test_matrix_copy(self):
     cmd.fragment('ala')
     cmd.fragment('gly')
     cmd.rotate('x', 90, 'none', object='ala')
     cmd.matrix_copy('ala', 'gly')
     self.assertArrayEqual(cmd.get_object_matrix('gly'),
                           (1.0, 0.0, 0.0, 0.0, 0.0, 0.0, -1.0, 0.0, 0.0,
                            1.0, 0.0, 0.0, 0.0, 0.0, 0.0, 1.0), 1e-4)
     cmd.matrix_reset('gly', mode=1)
     self.assertArrayEqual(cmd.get_object_matrix('gly'),
                           (1.0, 0.0, 0.0, 0.0, 0.0, 1.0, 0.0, 0.0, 0.0,
                            0.0, 1.0, 0.0, 0.0, 0.0, 0.0, 1.0), 1e-4)
コード例 #2
0
ファイル: editing.py プロジェクト: schrodinger/pymol-testing
 def test_matrix_copy(self):
     cmd.fragment('ala')
     cmd.fragment('gly')
     cmd.rotate('x', 90, 'none', object='ala')
     cmd.matrix_copy('ala', 'gly')
     self.assertArrayEqual(cmd.get_object_matrix('gly'),
             (1.0, 0.0, 0.0, 0.0,
              0.0, 0.0,-1.0, 0.0,
              0.0, 1.0, 0.0, 0.0,
              0.0, 0.0, 0.0, 1.0), 1e-4)
     cmd.matrix_reset('gly', mode=1)
     self.assertArrayEqual(cmd.get_object_matrix('gly'),
             (1.0, 0.0, 0.0, 0.0,
              0.0, 1.0, 0.0, 0.0,
              0.0, 0.0, 1.0, 0.0,
              0.0, 0.0, 0.0, 1.0), 1e-4)
コード例 #3
0
ファイル: moving.py プロジェクト: ankitamehta/pymol-psico
def matrix_to_ttt(names, reverse=0, state=-1, quiet=1):
    '''
DESCRIPTION

    Objects can have state matrices and view (frames) matrices. This function
    takes the total matrix and stores it either as view matrix or as state
    matrix (reverse=1). For movie frames, movie_auto_store must be set.
    '''
    from . import querying
    reverse, state, quiet = int(reverse), int(state), int(quiet)
    ostate = state
    for object in cmd.get_object_list('(' + names + ')'):
        if ostate < 1:
            state = querying.get_object_state(object)
        matrix = cmd.get_object_matrix(object, state)
        cmd.matrix_reset(object)
        if reverse:
            cmd.reset(object)
            cmd.transform_object(object, matrix, homogenous=1)
        else:
            cmd.set_object_ttt(object, matrix)
コード例 #4
0
def matrix_to_ttt(names, reverse=0, state=-1, quiet=1):
    '''
DESCRIPTION

    Objects can have state matrices and view (frames) matrices. This function
    takes the total matrix and stores it either as view matrix or as state
    matrix (reverse=1). For movie frames, movie_auto_store must be set.
    '''
    from . import querying
    reverse, state, quiet = int(reverse), int(state), int(quiet)
    ostate = state
    for object in cmd.get_object_list('(' + names + ')'):
        if ostate < 1:
            state = querying.get_object_state(object)
        matrix = cmd.get_object_matrix(object, state)
        for i in range(cmd.count_states(object)):
            cmd.matrix_reset(object, i + 1)
        if reverse:
            cmd.reset(object)
            cmd.transform_object(object, matrix, homogenous=1)
        else:
            cmd.set_object_ttt(object, matrix)