def run(self, queue, atol, rtol):
qcomp = queue.cl_queue_comp
xarr = Array(qcomp, cnt, dtype, data=x.data)
yarr = Array(qcomp, cnt, dtype, data=y.data)
zarr = Array(qcomp, cnt, dtype, data=z.data)
self._retarr = rkern(xarr, yarr, zarr, atol, rtol, queue=qcomp)
def __init__(self, sf, omega):
'''Param:
sf: the freeze out hypersf ds0,ds1,ds2,ds3,vx,vy,veta,etas
omega: omega^tau, x, y, etas
'''
self.cwd, cwf = os.path.split(__file__)
self.mass = 1.115
self.Tfrz = 0.137
self.ctx = cl.create_some_context()
self.queue = cl.CommandQueue(self.ctx)
src = open('kernel_polarization.cl', 'r').read()
self.prg = cl.Program(self.ctx, src).build()
# calc umu since they are used for each (Y,pt,phi)
vx = sf[:, 4]
vy = sf[:, 5]
vz = sf[:, 6]
v_sqr = vx * vx + vy * vy + vz * vz
v_sqr[v_sqr > 1.0] = 0.99999
u0 = 1.0 / np.sqrt(1.0 - v_sqr)
self.size_sf = len(sf[:, 0])
h_umu = np.zeros((self.size_sf, 4), dtype=np.float32)
h_umu[:, 0] = u0
h_umu[:, 1] = u0 * vx
h_umu[:, 2] = u0 * vy
h_umu[:, 3] = u0 * vz
h_smu = sf[:, 0:4].astype(np.float32)
h_etas = sf[:, 7].astype(np.float32)
h_omegaY = 0.5 * omega[:, 2].astype(np.float32)
mf = cl.mem_flags
self.d_smu = cl.Buffer(self.ctx,
mf.READ_ONLY | mf.COPY_HOST_PTR,
hostbuf=h_smu)
self.d_umu = cl.Buffer(self.ctx,
mf.READ_ONLY | mf.COPY_HOST_PTR,
hostbuf=h_umu)
self.d_omegaY = cl.Buffer(self.ctx,
mf.READ_ONLY | mf.COPY_HOST_PTR,
hostbuf=h_omegaY)
self.d_etas = cl.Buffer(self.ctx,
mf.READ_ONLY | mf.COPY_HOST_PTR,
hostbuf=h_etas)
self.d_pol = Array(self.queue, self.size_sf, np.float32)
self.d_vor = Array(self.queue, self.size_sf, np.float32)
self.d_rho = Array(self.queue, self.size_sf, np.float32)
def getitem_device(self, item):
if isinstance(item, slice):
item = np.arange(len(self))[item]
if is_iterable(item):
return CLRaggedArray.from_buffer(
self.queue,
self.cl_buf,
self.starts[item],
self.shape0s[item],
self.shape1s[item],
self.stride0s[item],
self.stride1s[item],
names=[self.names[i] for i in item],
)
else:
s = self.dtype.itemsize
return Array(
self.queue,
(self.shape0s[item], self.shape1s[item]),
self.dtype,
strides=(self.stride0s[item] * s, self.stride1s[item] * s),
data=self.cl_buf.data,
offset=self.starts[item] * s,
)
def inner_rand(queue, shape, dtype, luxury=None, a=0, b=1):
from pyopencl.array import Array
luxury = kwargs.pop("luxury", None)
gen = _get_generator(queue, luxury)
result = Array(queue, shape, dtype)
gen.fill_uniform(result, a=a, b=b)
return result
def rand(queue, shape, dtype, luxury=None, a=0, b=1):
"""Return an array of `shape` filled with random values of `dtype`
in the range [a,b).
"""
from pyopencl.array import Array
gen = _get_generator(queue, luxury)
result = Array(queue, shape, dtype)
result.add_event(gen.fill_uniform(result, a=a, b=b))
return result
def setup(sizes, dtype):
ctx = cl.create_some_context()
queue = cl.CommandQueue(ctx)
host_arrays, device_arrays = [], []
for size in sizes:
numpy_array = np.random.rand(*size).astype(dtype=dtype)
opencl_array = Array(queue, numpy_array.shape, numpy_array.dtype)
opencl_array.set(numpy_array)
host_arrays.append(numpy_array)
device_arrays.append(opencl_array)
queue.finish()
return queue, host_arrays, device_arrays
def rand(context, queue, shape, dtype):
from pyopencl.array import Array
from pyopencl.elementwise import get_elwise_kernel
result = Array(context, shape, dtype, queue=queue)
if dtype == numpy.float32:
func = get_elwise_kernel(
context, "float *dest, unsigned int seed", md5_code + """
#define POW_2_M32 (1/4294967296.0f)
dest[i] = a*POW_2_M32;
if ((i += gsize) < n)
dest[i] = b*POW_2_M32;
if ((i += gsize) < n)
dest[i] = c*POW_2_M32;
if ((i += gsize) < n)
dest[i] = d*POW_2_M32;
""", "md5_rng_float")
elif dtype == numpy.float64:
func = get_elwise_kernel(
context, "double *dest, unsigned int seed", md5_code + """
#define POW_2_M32 (1/4294967296.0)
#define POW_2_M64 (1/18446744073709551616.)
dest[i] = a*POW_2_M32 + b*POW_2_M64;
if ((i += gsize) < n)
{
dest[i] = c*POW_2_M32 + d*POW_2_M64;
}
""", "md5_rng_float")
elif dtype in [numpy.int32, numpy.uint32]:
func = get_elwise_kernel(
context, "unsigned int *dest, unsigned int seed", md5_code + """
dest[i] = a;
if ((i += gsize) < n)
dest[i] = b;
if ((i += gsize) < n)
dest[i] = c;
if ((i += gsize) < n)
dest[i] = d;
""", "md5_rng_int")
else:
raise NotImplementedError
func(queue, result._global_size, result._local_size, result.data,
numpy.random.randint(2**31 - 1), result.size)
return result
def rand(queue, shape, dtype, luxury=None, a=0, b=1):
"""Return an array of `shape` filled with random values of `dtype`
in the range [a,b).
"""
if luxury is not None:
from warnings import warn
warn("Specifying the 'luxury' argument is deprecated and will stop being "
"supported in PyOpenCL 2018.x", stacklevel=2)
from pyopencl.array import Array
gen = _get_generator(queue.context)
result = Array(queue, shape, dtype)
gen.fill_uniform(result, a=a, b=b)
return result
def getitem_device(self, item):
if isinstance(item, slice):
item = np.arange(len(self))[item]
if is_iterable(item):
rval = self.__class__.__new__(self.__class__)
rval.queue = self.queue
rval.starts = self.starts[item]
rval.shape0s = self.shape0s[item]
rval.shape1s = self.shape1s[item]
rval.stride0s = self.stride0s[item]
rval.stride1s = self.stride1s[item]
rval.cl_buf = self.cl_buf
rval.names = [self.names[i] for i in item]
return rval
else:
s = self.dtype.itemsize
return Array(
self.queue,
(self.shape0s[item], self.shape1s[item]), self.dtype,
strides=(self.stride0s[item] * s, self.stride1s[item] * s),
data=self.cl_buf.data, offset=self.starts[item] * s)
def rand(context, queue, shape, dtype):
from pyopencl.array import Array
result = Array(context, shape, dtype, queue=queue)
_rand(result, numpy.random.randint(2**31 - 1))
return result
from pyopencl.array import arange, Array
from pyopencl.reduction import ReductionKernel
import numpy
ctx = pyopencl.create_some_context()
queue = pyopencl.CommandQueue(ctx)
#print dir(cl)
#a = arange(queue, 400, dtype=numpy.float32)
#b = arange(queue, 400, dtype=numpy.float32)
acpu = numpy.zeros((100, 1), dtype=numpy.int32)
for i in xrange(0, 100):
if i % 5 == 0:
acpu[i] = 1
a = Array(queue, (100, 1), numpy.int32)
a.set(acpu)
queue.finish()
krnl = ReductionKernel(
ctx,
numpy.int32,
neutral="0",
reduce_expr="a+b",
map_expr="x[i]", #*y[i]",
arguments="__global int *x") #, __global in *y")
my_sum = krnl(a).get()
queue.finish()
print my_sum
# generate some random data on the CPU
m, n = 5, 4
dtype = 'float32' # also supports 'float64'
A = np.zeros((m, n), dtype=dtype)
x = np.zeros(n, dtype=dtype)
y = np.zeros(m, dtype=dtype)
rng = np.random.RandomState(1) # change the seed to see different data
A[...] = rng.uniform(-1, 1, size=A.shape)
x[...] = rng.uniform(-1, 1, size=x.shape)
y[...] = rng.uniform(-1, 1, size=y.shape)
# allocate OpenCL memory on the device
clA = Array(queue, A.shape, A.dtype)
clx = Array(queue, x.shape, x.dtype)
cly = Array(queue, y.shape, y.dtype)
# copy data to device
clA.set(A)
clx.set(x)
# compute a matrix-vector product (gemv)
blas.gemv(queue, clA, clx, cly)
# check the result
print("Expected: ", np.dot(A, x))
print("Actual: ", cly.get())
# try a matrix-vector product with the transpose
def to_ocl(a):
cla = Array(queue, a.shape, a.dtype)
cla.set(a)
return cla
# start up the BLAS
blas.setup()
# generate some random data on the CPU
n = 5
dtype = 'float64' # also supports 'float64'
x = np.zeros(n, dtype=dtype)
y = np.zeros(n, dtype=dtype)
rng = np.random.RandomState(1) # change the seed to see different data
x[...] = rng.uniform(-1, 1, size=x.shape)
y[...] = rng.uniform(-1, 1, size=y.shape)
# allocate OpenCL memory on the device
clx = Array(queue, x.shape, x.dtype)
cly = Array(queue, y.shape, y.dtype)
cld = Array(queue, 1, x.dtype)
# copy data to device
clx.set(x)
cly.set(y)
# compute a dot product (dot)
blas.dot(queue, clx, cly, cld)
# check the result
print("Expected: ", np.dot(x, y))
print("Actual: ", cld.get()[0])
# tidy up the BLAS
import numpy as np
import pyopencl as cl
from pyopencl.array import Array
import pyclblast
# Settings for this sample
dtype = 'float32'
print("# Setting up OpenCL")
ctx = cl.create_some_context()
queue = cl.CommandQueue(ctx)
print("# Setting up Numpy arrays")
m, n, k = 2, 3, 4
a = np.random.rand(m, k).astype(dtype=dtype)
b = np.random.rand(k, n).astype(dtype=dtype)
c = np.random.rand(m, n).astype(dtype=dtype)
print("# Setting up OpenCL arrays")
cla = Array(queue, a.shape, a.dtype)
clb = Array(queue, b.shape, b.dtype)
clc = Array(queue, c.shape, c.dtype)
cla.set(a)
clb.set(b)
clc.set(c)
print("# Example level-3 operation: GEMM")
pyclblast.gemm(queue, m, n, k, cla, clb, clc, a_ld=k, b_ld=n, c_ld=n)
print("# Matrix C result: %s" % clc.get())
print("# Expected result: %s" % (np.dot(a, b)))
import pyclblast
# Settings for this sample
dtype = 'float32'
m, n = 4, 3
alpha = 1.0
beta = 0.0
print("# Setting up OpenCL")
ctx = cl.create_some_context()
queue = cl.CommandQueue(ctx)
print("# Setting up Numpy arrays")
a = np.random.rand(m, n).astype(dtype=dtype)
x = np.random.rand(n).astype(dtype=dtype)
y = np.random.rand(m).astype(dtype=dtype)
print("# Setting up OpenCL arrays")
cla = Array(queue, a.shape, a.dtype)
clx = Array(queue, x.shape, x.dtype)
cly = Array(queue, y.shape, y.dtype)
cla.set(a)
clx.set(x)
cly.set(y)
print("# Example level-2 operation: GEMV")
pyclblast.gemv(queue, m, n, cla, clx, cly, a_ld=n, alpha=alpha, beta=beta)
queue.finish()
print("# Result for vector y: %s" % cly.get())
print("# Expected result: %s" % (alpha * np.dot(a, x) + beta * y))
A = np.zeros((n, n), dtype=dtype)
x = np.zeros(n, dtype=dtype)
x1 = np.zeros(n, dtype=dtype)
x2 = np.zeros(n, dtype=dtype)
rng = np.random.RandomState(1) # change the seed to see different data
A[...] = rng.uniform(-1, 1, size=A.shape)
x[...] = rng.uniform(-1, 1, size=x.shape)
x1[...] = rng.uniform(-1, 1, size=x1.shape)
x2[...] = rng.uniform(-1, 1, size=x2.shape)
A_upper = np.triu(A)
A = np.tril(A)
# allocate OpenCL memory on the device
clA = Array(queue, A.shape, A.dtype)
clA_upper = Array(queue, A.shape, A.dtype)
clx = Array(queue, x.shape, x.dtype)
clx1 = Array(queue, x1.shape, x1.dtype)
clx2 = Array(queue, x2.shape, x2.dtype)
# copy data to device
clA.set(A)
clA_upper.set(A_upper)
clx.set(x)
# compute a triangular solve (trsv)
blas.trsv(queue, clA, clx)
# check the result
print("Expected: ", np.linalg.solve(A, x))