def dump_all_diags(pops=[]):
import pyphare.pharein as ph, numpy as np
sim = ph.global_vars.sim
timestamps = np.arange(0, sim.time_step + 3) * sim.time_step
for quantity in ["density", "bulkVelocity"]:
ph.FluidDiagnostics(
quantity=quantity,
write_timestamps=timestamps,
compute_timestamps=timestamps,
)
for pop in pops:
for quantity in ["density", "flux"]:
ph.FluidDiagnostics(quantity=quantity,
write_timestamps=timestamps,
compute_timestamps=timestamps,
population_name=pop)
for quantity in ['domain', 'levelGhost', 'patchGhost']:
ph.ParticleDiagnostics(quantity=quantity,
compute_timestamps=timestamps,
write_timestamps=timestamps,
population_name=pop)
for quantity in ["E", "B"]:
ph.ElectromagDiagnostics(
quantity=quantity,
write_timestamps=timestamps,
compute_timestamps=timestamps,
)
def dump_all_diags(pops=[], flush_every=100, timestamps=None):
import pyphare.pharein as ph, numpy as np
sim = ph.global_vars.sim
if timestamps is None:
timestamps = all_timestamps(sim)
ph.MetaDiagnostics(
quantity="tags",
write_timestamps=timestamps,
compute_timestamps=timestamps,
)
for quantity in ["density", "bulkVelocity"]:
ph.FluidDiagnostics(
quantity=quantity,
write_timestamps=timestamps,
compute_timestamps=timestamps,
flush_every=flush_every,
)
for pop in pops:
for quantity in ["density", "flux"]:
ph.FluidDiagnostics(quantity=quantity,
write_timestamps=timestamps,
compute_timestamps=timestamps,
flush_every=flush_every,
population_name=pop)
for quantity in ['domain', 'levelGhost', 'patchGhost']:
ph.ParticleDiagnostics(quantity=quantity,
compute_timestamps=timestamps,
write_timestamps=timestamps,
flush_every=flush_every,
population_name=pop)
for quantity in ["E", "B"]:
ph.ElectromagDiagnostics(
quantity=quantity,
write_timestamps=timestamps,
compute_timestamps=timestamps,
flush_every=flush_every,
)
def config(**options):
ph.Simulation(**options)
ph.MaxwellianFluidModel(bx=bx,
by=by,
bz=bz,
protons={
"charge": 1,
"density": density,
**vvv
})
ph.ElectronModel(closure="isothermal", Te=0.12)
sim = ph.global_vars.sim
timestamps = all_timestamps(sim)
for quantity in ["E", "B"]:
ph.ElectromagDiagnostics(
quantity=quantity,
write_timestamps=timestamps,
compute_timestamps=timestamps,
)
for quantity in ["density", "bulkVelocity"]:
ph.FluidDiagnostics(
quantity=quantity,
write_timestamps=timestamps,
compute_timestamps=timestamps,
)
for pop in sim.model.populations:
for quantity in ['domain']:
ph.ParticleDiagnostics(
quantity=quantity,
compute_timestamps=timestamps[:particle_diagnostics["count"] +
1],
write_timestamps=timestamps[:particle_diagnostics["count"] +
1],
population_name=pop)