import re
import os
import numpy
from optparse import OptionParser
from pyqlb.nstats.peaks import *
def qlpdir(path):
"""
# Maybe this exists?
# """
scQLPs = "c:/Users/rrymer/Documents/Data/"
return "%s/%s" % (scQLPs, path)
factory = QLNumpyObjectFactory()
#plate = factory.parse_plate(qlpdir('EvaGreenPPEDNRwBGDNAAttempt3.qlp'))
##Lightweight plate
class LWPlate(object):
def add_well(self, well, fulldata):
# Should throw an exception if wellname exists, but have not figure out perl exception handling yet
if fulldata:
self.well_list[well.name] = well
else:
self.well_list[well.name] = ""
def wells(self):
print self
import csv
import argparse
import matplotlib.pyplot as plt
import matplotlib.mlab as mlab
from scipy import optimize
from pylab import *
from pyqlb.nstats.peaks import *
def qlpdir(path):
"""
# Maybe this exists?
# """
scQLPs = "c:/Users/rrymer/Documents/Data/"
return "%s/%s" % (scQLPs, path)
factory = QLNumpyObjectFactory() #not sure what this does
#Lightweight plate, collects all the wells to be analyzed by plate
class LWPlate( object ):
def add_well( self, well, fulldata ):
# Should throw an exception if wellname exists, but have not figure out perl exception handling yet
if fulldata:
self.well_list[well.name] = well
else:
self.well_list[well.name] = ""
def wells(self):
print self
return( self.well_list )
def __init__(self, filename, platename):
