コード例 #1
0
ファイル: test_ccsd_t.py プロジェクト: pyscf/pyscf
    def test_ccsd_t_complex(self):
        mol = gto.M()
        numpy.random.seed(12)
        nocc, nvir = 3, 4
        nmo = nocc + nvir
        eris = cc.rccsd._ChemistsERIs()
        eri1 = (numpy.random.random(
            (nmo, nmo, nmo, nmo)) + numpy.random.random(
                (nmo, nmo, nmo, nmo)) * .8j - .5 - .4j)
        eri1 = eri1 + eri1.transpose(1, 0, 2, 3)
        eri1 = eri1 + eri1.transpose(0, 1, 3, 2)
        eri1 = eri1 + eri1.transpose(2, 3, 0, 1)
        eri1 *= .1
        eris.ovvv = eri1[:nocc, nocc:, nocc:, nocc:]
        eris.ovoo = eri1[:nocc, nocc:, :nocc, :nocc]
        eris.ovov = eri1[:nocc, nocc:, :nocc, nocc:]
        t1 = (numpy.random.random((nocc, nvir)) * .1 + numpy.random.random(
            (nocc, nvir)) * .1j)
        t2 = (numpy.random.random(
            (nocc, nocc, nvir, nvir)) * .1 + numpy.random.random(
                (nocc, nocc, nvir, nvir)) * .1j)
        t2 = t2 + t2.transpose(1, 0, 3, 2)
        mf = scf.RHF(mol)
        mcc = cc.CCSD(mf)
        f = (numpy.random.random((nmo, nmo)) * .1 + numpy.random.random(
            (nmo, nmo)) * .1j)
        eris.fock = f + f.T.conj() + numpy.diag(numpy.arange(nmo))
        eris.mo_energy = eris.fock.diagonal().real
        e0 = ccsd_t.kernel(mcc, eris, t1, t2)

        eri2 = numpy.zeros((nmo * 2, nmo * 2, nmo * 2, nmo * 2),
                           dtype=numpy.complex128)
        orbspin = numpy.zeros(nmo * 2, dtype=int)
        orbspin[1::2] = 1
        eri2[0::2, 0::2, 0::2, 0::2] = eri1
        eri2[1::2, 1::2, 0::2, 0::2] = eri1
        eri2[0::2, 0::2, 1::2, 1::2] = eri1
        eri2[1::2, 1::2, 1::2, 1::2] = eri1
        eri2 = eri2.transpose(0, 2, 1, 3) - eri2.transpose(0, 2, 3, 1)
        fock = numpy.zeros((nmo * 2, nmo * 2), dtype=numpy.complex128)
        fock[0::2, 0::2] = eris.fock
        fock[1::2, 1::2] = eris.fock
        eris1 = gccsd._PhysicistsERIs()
        eris1.ovvv = eri2[:nocc * 2, nocc * 2:, nocc * 2:, nocc * 2:]
        eris1.oovv = eri2[:nocc * 2, :nocc * 2, nocc * 2:, nocc * 2:]
        eris1.ooov = eri2[:nocc * 2, :nocc * 2, :nocc * 2, nocc * 2:]
        eris1.fock = fock
        eris1.mo_energy = fock.diagonal().real
        t1 = gccsd.spatial2spin(t1, orbspin)
        t2 = gccsd.spatial2spin(t2, orbspin)
        gcc = gccsd.GCCSD(scf.GHF(gto.M()))
        e1 = gccsd_t.kernel(gcc, eris1, t1, t2)
        self.assertAlmostEqual(e0, e1.real, 9)
        self.assertAlmostEqual(e1,
                               -0.98756910139720788 - 0.0019567929592079489j,
                               9)
コード例 #2
0
ファイル: test_ccsd_t.py プロジェクト: chrinide/pyscf
    def test_ccsd_t_complex(self):
        mol = gto.M()
        numpy.random.seed(12)
        nocc, nvir = 3, 4
        nmo = nocc + nvir
        eris = cc.rccsd._ChemistsERIs()
        eri1 = (numpy.random.random((nmo,nmo,nmo,nmo)) +
                numpy.random.random((nmo,nmo,nmo,nmo)) * .8j - .5-.4j)
        eri1 = eri1 + eri1.transpose(1,0,2,3)
        eri1 = eri1 + eri1.transpose(0,1,3,2)
        eri1 = eri1 + eri1.transpose(2,3,0,1)
        eri1 *= .1
        eris.ovvv = eri1[:nocc,nocc:,nocc:,nocc:]
        eris.ovoo = eri1[:nocc,nocc:,:nocc,:nocc]
        eris.ovov = eri1[:nocc,nocc:,:nocc,nocc:]
        t1 = (numpy.random.random((nocc,nvir)) * .1 +
              numpy.random.random((nocc,nvir)) * .1j)
        t2 = (numpy.random.random((nocc,nocc,nvir,nvir)) * .1 +
              numpy.random.random((nocc,nocc,nvir,nvir)) * .1j)
        t2 = t2 + t2.transpose(1,0,3,2)
        mf = scf.RHF(mol)
        mcc = cc.CCSD(mf)
        f = (numpy.random.random((nmo,nmo)) * .1 +
             numpy.random.random((nmo,nmo)) * .1j)
        eris.fock = f+f.T.conj() + numpy.diag(numpy.arange(nmo))
        eris.mo_energy = eris.fock.diagonal().real
        e0 = ccsd_t.kernel(mcc, eris, t1, t2)

        eri2 = numpy.zeros((nmo*2,nmo*2,nmo*2,nmo*2), dtype=numpy.complex)
        orbspin = numpy.zeros(nmo*2,dtype=int)
        orbspin[1::2] = 1
        eri2[0::2,0::2,0::2,0::2] = eri1
        eri2[1::2,1::2,0::2,0::2] = eri1
        eri2[0::2,0::2,1::2,1::2] = eri1
        eri2[1::2,1::2,1::2,1::2] = eri1
        eri2 = eri2.transpose(0,2,1,3) - eri2.transpose(0,2,3,1)
        fock = numpy.zeros((nmo*2,nmo*2), dtype=numpy.complex)
        fock[0::2,0::2] = eris.fock
        fock[1::2,1::2] = eris.fock
        eris1 = gccsd._PhysicistsERIs()
        eris1.ovvv = eri2[:nocc*2,nocc*2:,nocc*2:,nocc*2:]
        eris1.oovv = eri2[:nocc*2,:nocc*2,nocc*2:,nocc*2:]
        eris1.ooov = eri2[:nocc*2,:nocc*2,:nocc*2,nocc*2:]
        eris1.fock = fock
        eris1.mo_energy = fock.diagonal().real
        t1 = gccsd.spatial2spin(t1, orbspin)
        t2 = gccsd.spatial2spin(t2, orbspin)
        gcc = gccsd.GCCSD(scf.GHF(gto.M()))
        e1 = gccsd_t.kernel(gcc, eris1, t1, t2)
        self.assertAlmostEqual(e0, e1.real, 9)
        self.assertAlmostEqual(e1, -0.98756910139720788-0.0019567929592079489j, 9)
コード例 #3
0
    def test_uccsd_t_complex(self):
        mol = gto.M()
        numpy.random.seed(12)
        nocca, noccb, nvira, nvirb = 3, 2, 4, 5
        nmo = nocca + nvira
        eris = cc.uccsd._ChemistsERIs()
        eris.nocca = nocca
        eris.noccb = noccb
        eris.nocc = (nocca, noccb)
        eri1 = (numpy.random.random((3,nmo,nmo,nmo,nmo)) +
                numpy.random.random((3,nmo,nmo,nmo,nmo)) * .8j - .5-.4j)
        eri1 = eri1 + eri1.transpose(0,2,1,4,3).conj()
        eri1[0] = eri1[0] + eri1[0].transpose(2,3,0,1)
        eri1[2] = eri1[2] + eri1[2].transpose(2,3,0,1)
        eri1 *= .1
        eris.ovvv = eri1[0,:nocca,nocca:,nocca:,nocca:]
        eris.ovov = eri1[0,:nocca,nocca:,:nocca,nocca:]
        eris.ovoo = eri1[0,:nocca,nocca:,:nocca,:nocca]
        eris.OVVV = eri1[2,:noccb,noccb:,noccb:,noccb:]
        eris.OVOV = eri1[2,:noccb,noccb:,:noccb,noccb:]
        eris.OVOO = eri1[2,:noccb,noccb:,:noccb,:noccb]
        eris.voVP = eri1[1,nocca:,:nocca,noccb:,:     ]
        eris.ovVV = eri1[1,:nocca,nocca:,noccb:,noccb:]
        eris.ovOV = eri1[1,:nocca,nocca:,:noccb,noccb:]
        eris.ovOO = eri1[1,:nocca,nocca:,:noccb,:noccb]
        eris.OVvv = eri1[1,nocca:,nocca:,:noccb,noccb:].transpose(2,3,0,1)
        eris.OVoo = eri1[1,:nocca,:nocca,:noccb,noccb:].transpose(2,3,0,1)
        t1a  = .1 * numpy.random.random((nocca,nvira)) + numpy.random.random((nocca,nvira))*.1j
        t1b  = .1 * numpy.random.random((noccb,nvirb)) + numpy.random.random((noccb,nvirb))*.1j
        t2aa = .1 * numpy.random.random((nocca,nocca,nvira,nvira)) + numpy.random.random((nocca,nocca,nvira,nvira))*.1j
        t2aa = t2aa - t2aa.transpose(0,1,3,2)
        t2aa = t2aa - t2aa.transpose(1,0,2,3)
        t2bb = .1 * numpy.random.random((noccb,noccb,nvirb,nvirb)) + numpy.random.random((noccb,noccb,nvirb,nvirb))*.1j
        t2bb = t2bb - t2bb.transpose(0,1,3,2)
        t2bb = t2bb - t2bb.transpose(1,0,2,3)
        t2ab = .1 * numpy.random.random((nocca,noccb,nvira,nvirb)) + numpy.random.random((nocca,noccb,nvira,nvirb))*.1j
        f = (numpy.random.random((2,nmo,nmo)) * .4 +
             numpy.random.random((2,nmo,nmo)) * .4j)
        eris.focka = f[0]+f[0].T.conj() + numpy.diag(numpy.arange(nmo))
        eris.fockb = f[1]+f[1].T.conj() + numpy.diag(numpy.arange(nmo))
        eris.mo_energy = (eris.focka.diagonal().real,
                          eris.fockb.diagonal().real)
        t1 = t1a, t1b
        t2 = t2aa, t2ab, t2bb
        mcc = cc.UCCSD(scf.UHF(mol))
        mcc.nocc = eris.nocc
        e0 = uccsd_t.kernel(mcc, eris, t1, t2)

        eri2 = numpy.zeros((nmo*2,nmo*2,nmo*2,nmo*2), dtype=eri1.dtype)
        orbspin = numpy.zeros(nmo*2,dtype=int)
        orbspin[1::2] = 1
        eri2[0::2,0::2,0::2,0::2] = eri1[0]
        eri2[1::2,1::2,0::2,0::2] = eri1[1].transpose(2,3,0,1)
        eri2[0::2,0::2,1::2,1::2] = eri1[1]
        eri2[1::2,1::2,1::2,1::2] = eri1[2]
        eri2 = eri2.transpose(0,2,1,3) - eri2.transpose(0,2,3,1)
        fock = numpy.zeros((nmo*2,nmo*2), dtype=eris.focka.dtype)
        fock[0::2,0::2] = eris.focka
        fock[1::2,1::2] = eris.fockb
        eris1 = gccsd._PhysicistsERIs()
        nocc = nocca + noccb
        eris1.ovvv = eri2[:nocc,nocc:,nocc:,nocc:]
        eris1.oovv = eri2[:nocc,:nocc,nocc:,nocc:]
        eris1.ooov = eri2[:nocc,:nocc,:nocc,nocc:]
        eris1.fock = fock
        eris1.mo_energy = fock.diagonal().real
        t1 = gccsd.spatial2spin(t1, orbspin)
        t2 = gccsd.spatial2spin(t2, orbspin)
        gcc = gccsd.GCCSD(scf.GHF(gto.M()))
        e1 = gccsd_t.kernel(gcc, eris1, t1, t2)
        self.assertAlmostEqual(e0, e1.real, 9)
        self.assertAlmostEqual(e1, -0.056092415718338388-0.011390417704868244j, 9)
コード例 #4
0
ファイル: test_uccsd_t.py プロジェクト: chrinide/pyscf
    def test_uccsd_t_complex(self):
        mol = gto.M()
        numpy.random.seed(12)
        nocca, noccb, nvira, nvirb = 3, 2, 4, 5
        nmo = nocca + nvira
        eris = cc.uccsd._ChemistsERIs()
        eris.nocca = nocca
        eris.noccb = noccb
        eris.nocc = (nocca, noccb)
        eri1 = (numpy.random.random((3,nmo,nmo,nmo,nmo)) +
                numpy.random.random((3,nmo,nmo,nmo,nmo)) * .8j - .5-.4j)
        eri1 = eri1 + eri1.transpose(0,2,1,4,3).conj()
        eri1[0] = eri1[0] + eri1[0].transpose(2,3,0,1)
        eri1[2] = eri1[2] + eri1[2].transpose(2,3,0,1)
        eri1 *= .1
        eris.ovvv = eri1[0,:nocca,nocca:,nocca:,nocca:]
        eris.ovov = eri1[0,:nocca,nocca:,:nocca,nocca:]
        eris.ovoo = eri1[0,:nocca,nocca:,:nocca,:nocca]
        eris.OVVV = eri1[2,:noccb,noccb:,noccb:,noccb:]
        eris.OVOV = eri1[2,:noccb,noccb:,:noccb,noccb:]
        eris.OVOO = eri1[2,:noccb,noccb:,:noccb,:noccb]
        eris.voVP = eri1[1,nocca:,:nocca,noccb:,:     ]
        eris.ovVV = eri1[1,:nocca,nocca:,noccb:,noccb:]
        eris.ovOV = eri1[1,:nocca,nocca:,:noccb,noccb:]
        eris.ovOO = eri1[1,:nocca,nocca:,:noccb,:noccb]
        eris.OVvv = eri1[1,nocca:,nocca:,:noccb,noccb:].transpose(2,3,0,1)
        eris.OVoo = eri1[1,:nocca,:nocca,:noccb,noccb:].transpose(2,3,0,1)
        t1a  = .1 * numpy.random.random((nocca,nvira)) + numpy.random.random((nocca,nvira))*.1j
        t1b  = .1 * numpy.random.random((noccb,nvirb)) + numpy.random.random((noccb,nvirb))*.1j
        t2aa = .1 * numpy.random.random((nocca,nocca,nvira,nvira)) + numpy.random.random((nocca,nocca,nvira,nvira))*.1j
        t2aa = t2aa - t2aa.transpose(0,1,3,2)
        t2aa = t2aa - t2aa.transpose(1,0,2,3)
        t2bb = .1 * numpy.random.random((noccb,noccb,nvirb,nvirb)) + numpy.random.random((noccb,noccb,nvirb,nvirb))*.1j
        t2bb = t2bb - t2bb.transpose(0,1,3,2)
        t2bb = t2bb - t2bb.transpose(1,0,2,3)
        t2ab = .1 * numpy.random.random((nocca,noccb,nvira,nvirb)) + numpy.random.random((nocca,noccb,nvira,nvirb))*.1j
        f = (numpy.random.random((2,nmo,nmo)) * .4 +
             numpy.random.random((2,nmo,nmo)) * .4j)
        eris.focka = f[0]+f[0].T.conj() + numpy.diag(numpy.arange(nmo))
        eris.fockb = f[1]+f[1].T.conj() + numpy.diag(numpy.arange(nmo))
        eris.mo_energy = (eris.focka.diagonal().real,
                          eris.fockb.diagonal().real)
        t1 = t1a, t1b
        t2 = t2aa, t2ab, t2bb
        mcc = cc.UCCSD(scf.UHF(mol))
        mcc.nocc = eris.nocc
        e0 = uccsd_t.kernel(mcc, eris, t1, t2)

        eri2 = numpy.zeros((nmo*2,nmo*2,nmo*2,nmo*2), dtype=eri1.dtype)
        orbspin = numpy.zeros(nmo*2,dtype=int)
        orbspin[1::2] = 1
        eri2[0::2,0::2,0::2,0::2] = eri1[0]
        eri2[1::2,1::2,0::2,0::2] = eri1[1].transpose(2,3,0,1)
        eri2[0::2,0::2,1::2,1::2] = eri1[1]
        eri2[1::2,1::2,1::2,1::2] = eri1[2]
        eri2 = eri2.transpose(0,2,1,3) - eri2.transpose(0,2,3,1)
        fock = numpy.zeros((nmo*2,nmo*2), dtype=eris.focka.dtype)
        fock[0::2,0::2] = eris.focka
        fock[1::2,1::2] = eris.fockb
        eris1 = gccsd._PhysicistsERIs()
        nocc = nocca + noccb
        eris1.ovvv = eri2[:nocc,nocc:,nocc:,nocc:]
        eris1.oovv = eri2[:nocc,:nocc,nocc:,nocc:]
        eris1.ooov = eri2[:nocc,:nocc,:nocc,nocc:]
        eris1.fock = fock
        eris1.mo_energy = fock.diagonal().real
        t1 = gccsd.spatial2spin(t1, orbspin)
        t2 = gccsd.spatial2spin(t2, orbspin)
        gcc = gccsd.GCCSD(scf.GHF(gto.M()))
        e1 = gccsd_t.kernel(gcc, eris1, t1, t2)
        self.assertAlmostEqual(e0, e1.real, 9)
        self.assertAlmostEqual(e1, -0.056092415718338388-0.011390417704868244j, 9)