def maskRegion(self):
if self.oseg.data3d is None:
self.statusBar().showMessage('No DICOM data!')
return
self.statusBar().showMessage('Mask region...')
QApplication.processEvents()
pyed = QTSeedEditor(
self.oseg.data3d, mode='mask',
voxelSize=self.oseg.voxelsize_mm,
contours=((self.oseg.segmentation == 0).astype(np.int8)*2)
)
pyed.contours_old = pyed.contours.copy()
# initial mask set
# pyed.masked = np.ones(self.oseg.data3d.shape, np.int8)
# pyed.masked = (self.oseg.segmentation == 0).astype(np.int8)
mx = self.oseg.viewermax
mn = self.oseg.viewermin
width = mx - mn
# enter = (float(mx)-float(mn))
center = np.average([mx, mn])
logger.debug("window params max %f min %f width, %f center %f" %
(mx, mn, width, center))
pyed.changeC(center)
pyed.changeW(width)
pyed.exec_()
self.statusBar().showMessage('Ready')
def maskRegion(self):
if self.oseg.data3d is None:
self.statusBar().showMessage('No DICOM data!')
return
self.statusBar().showMessage('Mask region...')
QApplication.processEvents()
pyed = QTSeedEditor(
self.oseg.data3d, mode='mask',
voxelSize=self.oseg.voxelsize_mm,
contours=((self.oseg.segmentation == 0).astype(np.int8)*2)
)
pyed.contours_old = pyed.contours.copy()
# initial mask set
# pyed.masked = np.ones(self.oseg.data3d.shape, np.int8)
# pyed.masked = (self.oseg.segmentation == 0).astype(np.int8)
mx = self.oseg.viewermax
mn = self.oseg.viewermin
width = mx - mn
# enter = (float(mx)-float(mn))
center = np.average([mx, mn])
logger.debug("window params max %f min %f width, %f center %f" %
(mx, mn, width, center))
pyed.changeC(center)
pyed.changeW(width)
pyed.exec_()
self.statusBar().showMessage('Ready')
