def setup(self):
ScriptedLoadableModuleWidget.setup(self)
# Add margin to the sides
self.layout.setContentsMargins(4,0,4,0)
#
# Segment editor widget
#
import qSlicerSegmentationsModuleWidgetsPythonQt
self.editor = qSlicerSegmentationsModuleWidgetsPythonQt.qMRMLSegmentEditorWidget()
self.editor.setMaximumNumberOfUndoStates(10)
# Set parameter node first so that the automatic selections made when the scene is set are saved
self.selectParameterNode()
self.editor.setMRMLScene(slicer.mrmlScene)
self.layout.addWidget(self.editor)
# Observe editor effect registrations to make sure that any effects that are registered
# later will show up in the segment editor widget. For example, if Segment Editor is set
# as startup module, additional effects are registered after the segment editor widget is created.
import qSlicerSegmentationsEditorEffectsPythonQt
#TODO: For some reason the instance() function cannot be called as a class function although it's static
factory = qSlicerSegmentationsEditorEffectsPythonQt.qSlicerSegmentEditorEffectFactory()
self.effectFactorySingleton = factory.instance()
self.effectFactorySingleton.connect('effectRegistered(QString)', self.editorEffectRegistered)
# Connect observers to scene events
self.addObserver(slicer.mrmlScene, slicer.mrmlScene.StartCloseEvent, self.onSceneStartClose)
self.addObserver(slicer.mrmlScene, slicer.mrmlScene.EndCloseEvent, self.onSceneEndClose)
self.addObserver(slicer.mrmlScene, slicer.mrmlScene.EndImportEvent, self.onSceneEndImport)
def setup(self):
ScriptedLoadableModuleWidget.setup(self)
# Add margin to the sides
self.layout.setContentsMargins(4,0,4,0)
#
# Segment editor widget
#
import qSlicerSegmentationsModuleWidgetsPythonQt
self.editor = qSlicerSegmentationsModuleWidgetsPythonQt.qMRMLSegmentEditorWidget()
self.editor.setMaximumNumberOfUndoStates(10)
# Set parameter node first so that the automatic selections made when the scene is set are saved
self.selectParameterNode()
self.editor.setMRMLScene(slicer.mrmlScene)
self.layout.addWidget(self.editor)
# Observe editor effect registrations to make sure that any effects that are registered
# later will show up in the segment editor widget. For example, if Segment Editor is set
# as startup module, additional effects are registered after the segment editor widget is created.
import qSlicerSegmentationsEditorEffectsPythonQt
#TODO: For some reason the instance() function cannot be called as a class function although it's static
factory = qSlicerSegmentationsEditorEffectsPythonQt.qSlicerSegmentEditorEffectFactory()
self.effectFactorySingleton = factory.instance()
self.effectFactorySingleton.connect('effectRegistered(QString)', self.editorEffectRegistered)
# Connect observers to scene events
self.addObserver(slicer.mrmlScene, slicer.mrmlScene.StartCloseEvent, self.onSceneStartClose)
self.addObserver(slicer.mrmlScene, slicer.mrmlScene.EndCloseEvent, self.onSceneEndClose)
self.addObserver(slicer.mrmlScene, slicer.mrmlScene.EndImportEvent, self.onSceneEndImport)
def register(self):
import qSlicerSegmentationsEditorEffectsPythonQt
#TODO: For some reason the instance() function cannot be called as a class function although it's static
factory = qSlicerSegmentationsEditorEffectsPythonQt.qSlicerSegmentEditorEffectFactory()
effectFactorySingleton = factory.instance()
effectFactorySingleton.registerEffect(self.scriptedEffect)
logging.debug('Scripted segment editor effects registered: ' + self.scriptedEffect.name)
def register(self):
import qSlicerSegmentationsEditorEffectsPythonQt
#TODO: For some reason the instance() function cannot be called as a class function although it's static
factory = qSlicerSegmentationsEditorEffectsPythonQt.qSlicerSegmentEditorEffectFactory(
)
effectFactorySingleton = factory.instance()
effectFactorySingleton.registerEffect(self.scriptedEffect)
def setup(self):
ScriptedLoadableModuleWidget.setup(self)
# Load widget from .ui file (created by Qt Designer)
uiWidget = slicer.util.loadUI(
self.resourcePath('UI/SingleSliceSegmentation.ui'))
self.layout.addWidget(uiWidget)
self.ui = slicer.util.childWidgetVariables(uiWidget)
# Set up widgets
self.ui.inputSequenceBrowserSelector.setMRMLScene(slicer.mrmlScene)
self.ui.inputVolumeSelector.setMRMLScene(slicer.mrmlScene)
self.ui.inputSegmentationSelector.setMRMLScene(slicer.mrmlScene)
self.ui.segmentationBrowserSelector.setMRMLScene(slicer.mrmlScene)
# connections
self.ui.inputSequenceBrowserSelector.connect(
"currentNodeChanged(vtkMRMLNode*)", self.onInputBrowserChanged)
self.ui.inputVolumeSelector.connect("currentNodeChanged(vtkMRMLNode*)",
self.onInputVolumeChanged)
self.ui.inputSegmentationSelector.connect(
"currentNodeChanged(vtkMRMLNode*)", self.onSegmentationChanged)
self.ui.segmentationBrowserSelector.connect(
"currentNodeChanged(vtkMRMLNode*)",
self.onSegmentationBrowserChanged)
self.ui.skipImagesSpinBox.connect("valueChanged(int)",
self.onSkipImagesNumChanged)
self.ui.captureButton.connect('clicked(bool)', self.onCaptureButton)
self.ui.clearSegmentationButton.connect('clicked(bool)',
self.onClearButton)
self.ui.skipImageButton.connect('clicked(bool)', self.onSkipButton)
self.ui.exportButton.connect('clicked(bool)', self.onExportButton)
self.ui.editor.setMRMLScene(slicer.mrmlScene)
import qSlicerSegmentationsEditorEffectsPythonQt
# TODO: For some reason the instance() function cannot be called as a class function although it's static
factory = qSlicerSegmentationsEditorEffectsPythonQt.qSlicerSegmentEditorEffectFactory(
)
self.effectFactorySingleton = factory.instance()
self.effectFactorySingleton.connect('effectRegistered(QString)',
self.editorEffectRegistered)
def setupSegmentEditor(self):
self.ui.segmentEditorWidget.setMRMLScene(slicer.mrmlScene)
segmentEditorSingletonTag = "LiverRFA.SegmentEditor"
segmentEditorNode = slicer.mrmlScene.GetSingletonNode(
segmentEditorSingletonTag, "vtkMRMLSegmentEditorNode")
if segmentEditorNode is None:
segmentEditorNode = slicer.vtkMRMLSegmentEditorNode()
segmentEditorNode.SetSingletonTag(segmentEditorSingletonTag)
segmentEditorNode = slicer.mrmlScene.AddNode(segmentEditorNode)
if self.ui.segmentEditorWidget.mrmlSegmentEditorNode(
) == segmentEditorNode:
# nothing changed
return
self.ui.segmentEditorWidget.setMRMLSegmentEditorNode(segmentEditorNode)
# Observe editor effect registrations to make sure that any effects that are registered
# later will show up in the segment editor widget. For example, if Segment Editor is set
# as startup module, additional effects are registered after the segment editor widget is created.
import qSlicerSegmentationsEditorEffectsPythonQt
#TODO: For some reason the instance() function cannot be called as a class function although it's static
factory = qSlicerSegmentationsEditorEffectsPythonQt.qSlicerSegmentEditorEffectFactory(
)
self.effectFactorySingleton = factory.instance()
def setup(self):
ScriptedLoadableModuleWidget.setup(self)
# Load widget from .ui file (created by Qt Designer)
uiWidget = slicer.util.loadUI(
self.resourcePath('UI/SingleSliceSegmentation.ui'))
self.layout.addWidget(uiWidget)
self.ui = slicer.util.childWidgetVariables(uiWidget)
# Set up widgets
self.ui.inputSequenceBrowserSelector.setMRMLScene(slicer.mrmlScene)
self.ui.inputVolumeSelector.setMRMLScene(slicer.mrmlScene)
self.ui.inputSegmentationSelector.setMRMLScene(slicer.mrmlScene)
self.ui.segmentationBrowserSelector.setMRMLScene(slicer.mrmlScene)
# connections
self.ui.inputSequenceBrowserSelector.connect(
"currentNodeChanged(vtkMRMLNode*)", self.onInputBrowserChanged)
self.ui.inputVolumeSelector.connect("currentNodeChanged(vtkMRMLNode*)",
self.onInputVolumeChanged)
self.ui.inputSegmentationSelector.connect(
"currentNodeChanged(vtkMRMLNode*)", self.onSegmentationChanged)
self.ui.segmentationBrowserSelector.connect(
"currentNodeChanged(vtkMRMLNode*)",
self.onSegmentationBrowserChanged)
self.ui.skipImagesSpinBox.connect("valueChanged(int)",
self.onSkipImagesNumChanged)
self.ui.captureButton.connect('clicked(bool)', self.onCaptureButton)
self.ui.clearSegmentationButton.connect('clicked(bool)',
self.onClearButton)
self.ui.skipImageButton.connect('clicked(bool)', self.onSkipButton)
self.ui.exportButton.connect('clicked(bool)', self.onExportButton)
self.ui.layoutSelectButton.connect('clicked(bool)',
self.onLayoutSelectButton)
self.ui.editor.setMRMLScene(slicer.mrmlScene)
import qSlicerSegmentationsEditorEffectsPythonQt
# TODO: For some reason the instance() function cannot be called as a class function although it's static
factory = qSlicerSegmentationsEditorEffectsPythonQt.qSlicerSegmentEditorEffectFactory(
)
self.effectFactorySingleton = factory.instance()
self.effectFactorySingleton.connect('effectRegistered(QString)',
self.editorEffectRegistered)
# Add custom layout to layout selection menu
customLayout = """
<layout type="horizontal" split="true">
<item>
<view class="vtkMRMLSliceNode" singletontag="Red">
<property name="orientation" action="default">Axial</property>
<property name="viewlabel" action="default">R</property>
<property name="viewcolor" action="default">#F34A33</property>
</view>
</item>
<item>
<view class="vtkMRMLViewNode" singletontag="1">
<property name="viewlabel" action="default">1</property>
</view>
</item>
</layout>
"""
customLayoutId = 501
layoutManager = slicer.app.layoutManager()
layoutManager.layoutLogic().GetLayoutNode().AddLayoutDescription(
customLayoutId, customLayout)
viewToolBar = slicer.util.mainWindow().findChild(
'QToolBar', 'ViewToolBar')
layoutMenu = viewToolBar.widgetForAction(
viewToolBar.actions()[0]).menu()
layoutSwitchActionParent = layoutMenu
layoutSwitchAction = layoutSwitchActionParent.addAction(
"red + 3D side by side") # add inside layout list
layoutSwitchAction.setData(customLayoutId)
# layoutSwitchAction.setIcon(qt.QIcon(':Icons/Go.png'))
layoutSwitchAction.setToolTip('3D and slice view')
layoutSwitchAction.connect('triggered()',
lambda layoutId=customLayoutId: slicer.app.
layoutManager().setLayout(layoutId))
customLayout = """
<layout type="horizontal" split="true">
<item>
<view class="vtkMRMLSliceNode" singletontag="Red">
<property name="orientation" action="default">Axial</property>
<property name="viewlabel" action="default">R</property>
<property name="viewcolor" action="default">#F34A33</property>
</view>
</item>
<item>
<layout type=\"horizontal\">
<item>
<view class="vtkMRMLViewNode" singletontag="1">
<property name="viewlabel" action="default">1</property>
</view>
</item>
<item>
<view class="vtkMRMLViewNode" singletontag="2" type="secondary">
<property name="viewlabel" action="default">2</property>
</view>
</item>
</layout>
</item>
</layout>
"""
customLayoutId = 502
layoutManager.layoutLogic().GetLayoutNode().AddLayoutDescription(
customLayoutId, customLayout)
layoutSwitchActionParent = layoutMenu
layoutSwitchAction = layoutSwitchActionParent.addAction(
"red + stacked dual 3D") # add inside layout list
layoutSwitchAction.setData(customLayoutId)
# layoutSwitchAction.setIcon(qt.QIcon(':Icons/Go.png'))
layoutSwitchAction.setToolTip('Dual 3D and slice view')
layoutSwitchAction.connect('triggered()',
lambda layoutId=customLayoutId: slicer.app.
layoutManager().setLayout(layoutId))
