コード例 #1
0
ファイル: test_definition_v6.py プロジェクト: sau29/scale
    def test_convert_recipe_definition_to_v6_json_full(self):
        """Tests calling convert_recipe_definition_to_v6_json() with a full definition"""

        interface = Interface()
        interface.add_parameter(FileParameter('file_param_a', ['image/gif']))
        interface.add_parameter(JsonParameter('json_param_a', 'object'))
        interface.add_parameter(JsonParameter('json_param_b', 'object', required=False))

        definition = RecipeDefinition(interface)
        definition.add_job_node('A', 'job_type_1', '1.0', 1)
        definition.add_job_node('B', 'job_type_2', '2.0', 1)
        definition.add_job_node('C', 'job_type_3', '1.0', 2)
        definition.add_recipe_node('D', 'recipe_type_1', 1)
        definition.add_condition_node('E', Interface(), DataFilter())
        definition.add_job_node('F', 'job_type_4', '1.0', 1)
        definition.add_dependency('A', 'B')
        definition.add_dependency('A', 'C')
        definition.add_dependency('B', 'E')
        definition.add_dependency('C', 'D')
        definition.add_dependency('E', 'F')
        definition.add_recipe_input_connection('A', 'input_a', 'file_param_a')
        definition.add_dependency_input_connection('B', 'b_input_a', 'A', 'a_output_1')
        definition.add_dependency_input_connection('C', 'c_input_a', 'A', 'a_output_2')
        definition.add_dependency_input_connection('D', 'd_input_a', 'C', 'c_output_1')
        definition.add_recipe_input_connection('D', 'd_input_b', 'json_param_a')

        json = convert_recipe_definition_to_v6_json(definition)
        RecipeDefinitionV6(definition=json.get_dict(), do_validate=True)  # Revalidate
        self.assertSetEqual(set(json.get_dict()['nodes'].keys()), {'A', 'B', 'C', 'D', 'E', 'F'})
コード例 #2
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    def test_json(self):
        """Tests converting a ProcessCondition message to and from JSON"""

        definition = RecipeDefinition(Interface())
        # TODO: once DataFilter is implemented, create a DataFilter object here that accepts the inputs
        definition.add_condition_node('node_a', Interface(), DataFilter(True))
        definition_dict = convert_recipe_definition_to_v6_json(
            definition).get_dict()
        recipe_type = recipe_test_utils.create_recipe_type(
            definition=definition_dict)
        recipe = recipe_test_utils.create_recipe(recipe_type=recipe_type)
        condition = recipe_test_utils.create_recipe_condition(recipe=recipe,
                                                              save=True)
        recipe_test_utils.create_recipe_node(recipe=recipe,
                                             node_name='node_a',
                                             condition=condition,
                                             save=True)

        # Create message
        message = create_process_condition_messages([condition.id])[0]

        # Convert message to JSON and back, and then execute
        message_json_dict = message.to_json()
        new_message = ProcessCondition.from_json(message_json_dict)
        result = new_message.execute()

        self.assertTrue(result)
        condition = RecipeCondition.objects.get(id=condition.id)
        self.assertEqual(len(new_message.new_messages), 1)
        self.assertEqual(new_message.new_messages[0].type, 'update_recipe')
        self.assertEqual(new_message.new_messages[0].root_recipe_id, recipe.id)
        self.assertTrue(condition.is_processed)
        self.assertIsNotNone(condition.processed)
        self.assertTrue(condition.is_accepted)
コード例 #3
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ファイル: test_recipe_v6.py プロジェクト: sau29/scale
    def test_convert_recipe_to_v6_json(self):
        """Tests calling convert_recipe_to_v6_json() successfully"""

        job_type_1 = job_test_utils.create_seed_job_type()
        job_type_2 = job_test_utils.create_seed_job_type()
        job_type_3 = job_test_utils.create_seed_job_type()
        job_type_4 = job_test_utils.create_seed_job_type()
        recipe_type_1 = recipe_test_utils.create_recipe_type_v6()

        interface = Interface()
        interface.add_parameter(FileParameter('file_param_1', ['image/gif']))
        interface.add_parameter(JsonParameter('json_param_1', 'object'))
        df1 = DataFilter(filter_list=[{'name': 'file_param_1', 'type': 'media-type', 'condition': '==', 'values': ['image/gif']},
                                      {'name': 'json_param_1', 'type': 'object', 'condition': 'superset of', 'values': [{}]}],
                        all=False)

        definition = RecipeDefinition(interface)
        definition.add_job_node('A', job_type_1.name, job_type_1.version, job_type_1.revision_num)
        definition.add_job_node('B', job_type_2.name, job_type_2.version, job_type_2.revision_num)
        definition.add_job_node('C', job_type_3.name, job_type_3.version, job_type_3.revision_num)
        definition.add_recipe_node('D', recipe_type_1.name, recipe_type_1.revision_num)
        definition.add_job_node('E', job_type_4.name, job_type_4.version, job_type_4.revision_num)
        definition.add_condition_node('F', interface, df1) #False
        definition.add_job_node('G', job_type_4.name, job_type_4.version, job_type_4.revision_num)
        definition.add_dependency('A', 'B')
        definition.add_dependency('A', 'C')
        definition.add_dependency('B', 'E')
        definition.add_dependency('C', 'D')
        definition.add_dependency('A', 'F')
        definition.add_dependency('F', 'G')
        definition.add_recipe_input_connection('A', 'input_1', 'file_param_1')
        definition.add_dependency_input_connection('B', 'b_input_1', 'A', 'a_output_1')
        definition.add_dependency_input_connection('C', 'c_input_1', 'A', 'a_output_2')
        definition.add_dependency_input_connection('D', 'd_input_1', 'C', 'c_output_1')
        definition.add_recipe_input_connection('D', 'd_input_2', 'json_param_1')

        recipe = recipe_test_utils.create_recipe()
        job_a = job_test_utils.create_job(job_type=job_type_1, status='COMPLETED', save=False)
        job_b = job_test_utils.create_job(job_type=job_type_2, status='RUNNING', save=False)
        job_c = job_test_utils.create_job(job_type=job_type_3, status='COMPLETED', save=False)
        job_e = job_test_utils.create_job(job_type=job_type_4, status='PENDING', num_exes=0, save=False)
        Job.objects.bulk_create([job_a, job_b, job_c, job_e])
        condition_f = recipe_test_utils.create_recipe_condition(is_processed=True, is_accepted=False, save=True)
        recipe_d = recipe_test_utils.create_recipe(recipe_type=recipe_type_1)
        recipe_node_a = recipe_test_utils.create_recipe_node(recipe=recipe, node_name='A', job=job_a, save=False)
        recipe_node_b = recipe_test_utils.create_recipe_node(recipe=recipe, node_name='B', job=job_b, save=False)
        recipe_node_c = recipe_test_utils.create_recipe_node(recipe=recipe, node_name='C', job=job_c, save=False)
        recipe_node_d = recipe_test_utils.create_recipe_node(recipe=recipe, node_name='D', sub_recipe=recipe_d,
                                                             save=False)
        recipe_node_e = recipe_test_utils.create_recipe_node(recipe=recipe, node_name='E', job=job_e, save=False)
        recipe_node_f = recipe_test_utils.create_recipe_node(recipe=recipe, node_name='F', condition=condition_f,
                                                             save=False)
        recipe_nodes = [recipe_node_a, recipe_node_b, recipe_node_c, recipe_node_d, recipe_node_e, recipe_node_f]

        recipe_instance = RecipeInstance(definition, recipe, recipe_nodes)
        json = convert_recipe_to_v6_json(recipe_instance)
        RecipeInstanceV6(json=json.get_dict(), do_validate=True)  # Revalidate
        self.assertSetEqual(set(json.get_dict()['nodes'].keys()), {'A', 'B', 'C', 'D', 'E', 'F'})
コード例 #4
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    def test_get_nodes_to_create(self):
        """Tests calling Recipe.get_nodes_to_create()"""

        job_type = job_test_utils.create_job_type()
        sub_recipe_type = recipe_test_utils.create_recipe_type()

        # Create recipe
        definition = RecipeDefinition(Interface())
        definition.add_job_node('A', job_type.name, job_type.version,
                                job_type.revision_num)
        definition.add_condition_node('B', Interface(), DataFilter(True))
        definition.add_condition_node('C', Interface(), DataFilter(True))
        definition.add_condition_node('D', Interface(), DataFilter(False))
        definition.add_job_node('E', job_type.name, job_type.version,
                                job_type.revision_num)
        definition.add_job_node('F', job_type.name, job_type.version,
                                job_type.revision_num)
        definition.add_recipe_node('G', sub_recipe_type.name,
                                   sub_recipe_type.revision_num)
        definition.add_recipe_node('H', sub_recipe_type.name,
                                   sub_recipe_type.revision_num)
        definition.add_dependency('A', 'D')
        definition.add_dependency('A', 'E')
        definition.add_dependency('B', 'E')
        definition.add_dependency('B', 'F')
        definition.add_dependency('C', 'F')
        definition.add_dependency('D', 'G')
        definition.add_dependency('E', 'G')
        definition.add_dependency('E', 'H')
        definition_json_dict = convert_recipe_definition_to_v6_json(
            definition).get_dict()
        recipe_type = recipe_test_utils.create_recipe_type(
            definition=definition_json_dict)
        recipe = recipe_test_utils.create_recipe(recipe_type=recipe_type)

        # Nodes A, B, and D already exist
        job_a = job_test_utils.create_job(job_type=job_type,
                                          status='COMPLETED',
                                          save=True)
        condition_b = recipe_test_utils.create_recipe_condition(
            is_processed=True, is_accepted=True, save=False)
        condition_d = recipe_test_utils.create_recipe_condition(
            is_processed=True, is_accepted=False, save=False)
        RecipeCondition.objects.bulk_create([condition_b, condition_d])
        recipe_node_a = recipe_test_utils.create_recipe_node(recipe=recipe,
                                                             node_name='A',
                                                             job=job_a,
                                                             save=False)
        recipe_node_b = recipe_test_utils.create_recipe_node(
            recipe=recipe, node_name='B', condition=condition_b, save=False)
        recipe_node_d = recipe_test_utils.create_recipe_node(
            recipe=recipe, node_name='D', condition=condition_d, save=False)
        RecipeNode.objects.bulk_create(
            [recipe_node_a, recipe_node_b, recipe_node_d])

        recipe_instance = Recipe.objects.get_recipe_instance(recipe.id)
        nodes_to_create = recipe_instance.get_nodes_to_create()
        self.assertSetEqual(set(nodes_to_create.keys()), {'C', 'E', 'H'})
コード例 #5
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    def test_json(self):
        """Tests converting a ProcessCondition message to and from JSON"""

        definition = RecipeDefinition(Interface())

        cond_interface_1 = Interface()
        cond_interface_1.add_parameter(JsonParameter('cond_int', 'integer'))
        df1 = DataFilter(filter_list=[{
            'name': 'cond_int',
            'type': 'integer',
            'condition': '==',
            'values': [0]
        }])
        definition = RecipeDefinition(cond_interface_1)
        definition.add_condition_node('node_a', cond_interface_1, df1)
        definition.add_recipe_input_connection('node_a', 'cond_int',
                                               'cond_int')

        definition_dict = convert_recipe_definition_to_v6_json(
            definition).get_dict()
        recipe_type = recipe_test_utils.create_recipe_type_v6(
            definition=definition_dict)

        data_1 = Data()
        data_1.add_value(JsonValue('cond_int', 0))
        data_1_dict = convert_data_to_v6_json(data_1).get_dict()
        recipe = recipe_test_utils.create_recipe(recipe_type=recipe_type,
                                                 input=data_1_dict)
        condition = recipe_test_utils.create_recipe_condition(recipe=recipe,
                                                              save=True)
        recipe_test_utils.create_recipe_node(recipe=recipe,
                                             node_name='node_a',
                                             condition=condition,
                                             save=True)

        # Create message
        message = create_process_condition_messages([condition.id])[0]

        # Convert message to JSON and back, and then execute
        message_json_dict = message.to_json()
        new_message = ProcessCondition.from_json(message_json_dict)
        result = new_message.execute()

        self.assertTrue(result)
        condition = RecipeCondition.objects.get(id=condition.id)
        self.assertEqual(len(new_message.new_messages), 1)
        self.assertEqual(new_message.new_messages[0].type, 'update_recipe')
        self.assertEqual(new_message.new_messages[0].root_recipe_id, recipe.id)
        self.assertTrue(condition.is_processed)
        self.assertIsNotNone(condition.processed)
        self.assertTrue(condition.is_accepted)
コード例 #6
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ファイル: definition_v6.py プロジェクト: sau29/scale
    def get_definition(self):
        """Returns the recipe definition represented by this JSON

        :returns: The recipe definition
        :rtype: :class:`recipe.definition.definition.RecipeDefinition`:
        """

        interface_json = InterfaceV6(self._definition['input'],
                                     do_validate=False)
        interface = interface_json.get_interface()
        definition = RecipeDefinition(interface)

        # Add all nodes to definition first
        for node_name, node_dict in self._definition['nodes'].items():
            node_type_dict = node_dict['node_type']
            if node_type_dict['node_type'] == 'condition':
                cond_interface_json = InterfaceV6(node_type_dict['interface'],
                                                  do_validate=False)
                data_filter_json = DataFilterV6(node_type_dict['data_filter'],
                                                do_validate=False)
                definition.add_condition_node(
                    node_name, cond_interface_json.get_interface(),
                    data_filter_json.get_filter())
            elif node_type_dict['node_type'] == 'job':
                definition.add_job_node(node_name,
                                        node_type_dict['job_type_name'],
                                        node_type_dict['job_type_version'],
                                        node_type_dict['job_type_revision'])
            elif node_type_dict['node_type'] == 'recipe':
                definition.add_recipe_node(
                    node_name, node_type_dict['recipe_type_name'],
                    node_type_dict['recipe_type_revision'])

        # Now add dependencies and connections
        for node_name, node_dict in self._definition['nodes'].items():
            for dependency_dict in node_dict['dependencies']:
                acceptance = dependency_dict['acceptance'] if (
                    'acceptance' in dependency_dict) else True
                definition.add_dependency(dependency_dict['name'], node_name,
                                          acceptance)
            for conn_name, conn_dict in node_dict['input'].items():
                if conn_dict['type'] == 'recipe':
                    definition.add_recipe_input_connection(
                        node_name, conn_name, conn_dict['input'])
                elif conn_dict['type'] == 'dependency':
                    definition.add_dependency_input_connection(
                        node_name, conn_name, conn_dict['node'],
                        conn_dict['output'])

        return definition
コード例 #7
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ファイル: test_definition.py プロジェクト: ctc-oss/scale
    def test_validate_successful(self):
        """Tests calling RecipeDefinition.validate() successfully"""

        recipe_interface = Interface()
        recipe_interface.add_parameter(
            JsonParameter('recipe_input_1', 'integer'))
        definition = RecipeDefinition(recipe_interface)
        definition.add_job_node('A', 'job_type_1', '1.0', 1)
        condition_interface = Interface()
        condition_interface.add_parameter(
            JsonParameter('cond_param', 'integer'))
        definition.add_condition_node('B', condition_interface,
                                      DataFilter(True))
        definition.add_recipe_node('C', 'recipe_type_1', 1)
        definition.add_dependency('A', 'B')
        definition.add_dependency('B', 'C')
        definition.add_recipe_input_connection('A', 'a_input_1',
                                               'recipe_input_1')
        definition.add_dependency_input_connection('B', 'cond_param', 'A',
                                                   'a_output_1')
        definition.add_dependency_input_connection('C', 'c_input_1', 'A',
                                                   'a_output_1')
        definition.add_dependency_input_connection('C', 'c_input_2', 'B',
                                                   'cond_param')
        job_input_interface = Interface()
        job_input_interface.add_parameter(JsonParameter(
            'a_input_1', 'integer'))
        job_output_interface = Interface()
        job_output_interface.add_parameter(
            JsonParameter('a_output_1', 'integer'))
        recipe_input_interface = Interface()
        recipe_input_interface.add_parameter(
            JsonParameter('c_input_1', 'integer'))
        recipe_input_interface.add_parameter(
            JsonParameter('c_input_2', 'integer'))
        input_interfaces = {
            'A': job_input_interface,
            'C': recipe_input_interface
        }
        output_interfaces = {'A': job_output_interface, 'C': Interface()}

        warnings = definition.validate(input_interfaces, output_interfaces)
        self.assertListEqual(warnings, [])
コード例 #8
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    def test_condition_hit(self):
        """Tests calling Recipe.has_completed() when an entire recipe has completed"""
        """
            Job -> Condition -> Recipe
            parse-job -> condition-node -> recipe-node

        """

        manifest_1 = {
            'seedVersion': '1.0.0',
            'job': {
                'name': 'parse-job',
                'jobVersion': '1.0.0',
                'packageVersion': '1.0.0',
                'title': 'Test Parse Job',
                'description': 'Test Parse job',
                'maintainer': {
                    'name': 'John Doe',
                    'email': '*****@*****.**'
                },
                'timeout': 10,
                'interface': {
                    'command': '',
                    'inputs': {
                        'files': [{
                            'name': 'INPUT_FILE',
                            'mediaTypes': ['image/x-hdf5-image'],
                            'required': True
                        }],
                        'json': []
                    },
                    'outputs': {
                        'files': [{
                            'name': 'OUTPUT_A',
                            'pattern': '*.png',
                            'multiple': True
                        }]
                    }
                }
            }
        }
        job_type_1 = job_test_utils.create_seed_job_type(manifest=manifest_1)
        input_interface = Interface()
        input_interface.add_parameter(
            FileParameter('INPUT_FILE', ['image/x-hdf5-image'],
                          multiple=False))
        definition = RecipeDefinition(input_interface)
        definition.add_job_node('parse-job', job_type_1.name,
                                job_type_1.version, job_type_1.revision_num)

        cond_interface = Interface()
        cond_interface.add_parameter(FileParameter('INPUT_FILE',
                                                   ['image/png']))
        df = DataFilter(filter_list=[{
            'name': 'cond',
            'type': 'media-type',
            'condition': '==',
            'value': ['image/png']
        }])
        definition.add_condition_node('condition-node', cond_interface, df)

        sub_job_manifest = {
            'seedVersion': '1.0.0',
            'job': {
                'name': 'recipe-job',
                'jobVersion': '1.0.0',
                'packageVersion': '1.0.0',
                'title': 'Test Recipe Job',
                'description': 'Test Recipe job',
                'maintainer': {
                    'name': 'John Doe',
                    'email': '*****@*****.**'
                },
                'timeout': 10,
                'interface': {
                    'command': '',
                    'inputs': {
                        'files': [{
                            'name': 'INPUT_FILE',
                            'mediaTypes': ['image/png'],
                            'required': True
                        }],
                        'json': []
                    },
                    'outputs': {
                        'files': [{
                            'name': 'OUTPUT_A',
                            'pattern': '*.png',
                            'multiple': True
                        }]
                    }
                }
            }
        }
        sub_job = job_test_utils.create_seed_job_type(
            manifest=sub_job_manifest)

        sub_interface = Interface()
        sub_interface.add_parameter(FileParameter('INPUT_FILE', ['image/png']))
        definition_b = RecipeDefinition(sub_interface)
        definition_b.add_job_node('job_b', sub_job.name, sub_job.version,
                                  sub_job.revision_num)
        definition_b.add_recipe_input_connection('job_b', 'INPUT_FILE',
                                                 'INPUT_FILE')
        definition_b_dict = convert_recipe_definition_to_v6_json(
            definition_b).get_dict()
        sub_recipe_type = recipe_test_utils.create_recipe_type_v6(
            definition=definition_b_dict)
        definition.add_recipe_node('recipe-node', sub_recipe_type.name,
                                   sub_recipe_type.revision_num)

        # Connect the recipe input to the parse job
        definition.add_recipe_input_connection('parse-job', 'INPUT_FILE',
                                               'INPUT_FILE')

        # Connect the condition node to the parse job output
        definition.add_dependency_input_connection('condition-node', 'cond',
                                                   'parse-job', 'OUTPUT_A')

        # Connect the sub recipe to the condition output
        definition.add_dependency_input_connection('recipe-node', 'INPUT_FILE',
                                                   'condition-node', 'cond')
コード例 #9
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    def test_has_completed_true(self):
        """Tests calling Recipe.has_completed() when an entire recipe has completed"""

        data_dict = convert_data_to_v6_json(Data()).get_dict()
        job_type = job_test_utils.create_seed_job_type()
        sub_recipe_type = recipe_test_utils.create_recipe_type_v6()
        cond_interface_1 = Interface()
        cond_interface_1.add_parameter(JsonParameter('cond_int', 'integer'))
        df2 = DataFilter(filter_list=[{
            'name': 'cond_int',
            'type': 'integer',
            'condition': '==',
            'values': [0]
        }, {
            'name': 'cond_int',
            'type': 'integer',
            'condition': '!=',
            'values': [0]
        }],
                         all=True)  #always False

        definition = RecipeDefinition(Interface())
        definition.add_job_node('A', job_type.name, job_type.version,
                                job_type.revision_num)
        definition.add_recipe_node('B', sub_recipe_type.name,
                                   sub_recipe_type.revision_num)
        definition.add_job_node('C', job_type.name, job_type.version,
                                job_type.revision_num)
        definition.add_job_node('D', job_type.name, job_type.version,
                                job_type.revision_num)
        definition.add_job_node('E', job_type.name, job_type.version,
                                job_type.revision_num)
        definition.add_job_node('F', job_type.name, job_type.version,
                                job_type.revision_num)
        definition.add_recipe_node('G', sub_recipe_type.name,
                                   sub_recipe_type.revision_num)
        definition.add_job_node('H', job_type.name, job_type.version,
                                job_type.revision_num)
        definition.add_condition_node('I', cond_interface_1, df2)  #False
        definition.add_job_node('J', job_type.name, job_type.version,
                                job_type.revision_num)
        definition.add_dependency('A', 'C')
        definition.add_dependency('A', 'E')
        definition.add_dependency('A', 'H')
        definition.add_dependency('C', 'D')
        definition.add_dependency('G', 'H')
        definition.add_dependency('A', 'I')
        definition.add_dependency('I', 'J')

        job_a = job_test_utils.create_job(job_type=job_type,
                                          status='COMPLETED',
                                          output=data_dict,
                                          save=False)
        job_c = job_test_utils.create_job(job_type=job_type,
                                          status='COMPLETED',
                                          output=data_dict,
                                          save=False)
        job_d = job_test_utils.create_job(job_type=job_type,
                                          status='COMPLETED',
                                          output=data_dict,
                                          save=False)
        job_e = job_test_utils.create_job(job_type=job_type,
                                          status='COMPLETED',
                                          output=data_dict,
                                          save=False)
        job_f = job_test_utils.create_job(job_type=job_type,
                                          status='COMPLETED',
                                          output=data_dict,
                                          save=False)
        job_h = job_test_utils.create_job(job_type=job_type,
                                          status='COMPLETED',
                                          output=data_dict,
                                          save=False)
        Job.objects.bulk_create([job_a, job_c, job_d, job_e, job_f, job_h])

        condition_i = recipe_test_utils.create_recipe_condition(
            is_processed=True, is_accepted=False, save=True)
        recipe_b = recipe_test_utils.create_recipe(recipe_type=sub_recipe_type,
                                                   save=False)
        recipe_b.is_completed = True
        recipe_g = recipe_test_utils.create_recipe(recipe_type=sub_recipe_type,
                                                   save=False)
        recipe_g.is_completed = True
        Recipe.objects.bulk_create([recipe_b, recipe_g])

        definition_json_dict = convert_recipe_definition_to_v6_json(
            definition).get_dict()
        recipe_type = recipe_test_utils.create_recipe_type_v6(
            definition=definition_json_dict)
        recipe = recipe_test_utils.create_recipe(recipe_type=recipe_type)
        recipe_node_a = recipe_test_utils.create_recipe_node(recipe=recipe,
                                                             node_name='A',
                                                             job=job_a,
                                                             save=False,
                                                             is_original=False)
        recipe_node_c = recipe_test_utils.create_recipe_node(recipe=recipe,
                                                             node_name='C',
                                                             job=job_c,
                                                             save=False,
                                                             is_original=False)
        recipe_node_d = recipe_test_utils.create_recipe_node(recipe=recipe,
                                                             node_name='D',
                                                             job=job_d,
                                                             save=False,
                                                             is_original=False)
        recipe_node_e = recipe_test_utils.create_recipe_node(recipe=recipe,
                                                             node_name='E',
                                                             job=job_e,
                                                             save=False)
        recipe_node_f = recipe_test_utils.create_recipe_node(recipe=recipe,
                                                             node_name='F',
                                                             job=job_f,
                                                             save=False)
        recipe_node_h = recipe_test_utils.create_recipe_node(recipe=recipe,
                                                             node_name='H',
                                                             job=job_h,
                                                             save=False)
        recipe_node_i = recipe_test_utils.create_recipe_node(
            recipe=recipe, node_name='I', condition=condition_i, save=False)

        recipe_node_g = recipe_test_utils.create_recipe_node(
            recipe=recipe,
            node_name='G',
            sub_recipe=recipe_g,
            save=False,
            is_original=False)
        recipe_node_b = recipe_test_utils.create_recipe_node(
            recipe=recipe, node_name='B', sub_recipe=recipe_b, save=False)
        RecipeNode.objects.bulk_create([
            recipe_node_a, recipe_node_b, recipe_node_c, recipe_node_d,
            recipe_node_e, recipe_node_f, recipe_node_g, recipe_node_h,
            recipe_node_i
        ])

        recipe_instance = Recipe.objects.get_recipe_instance(recipe.id)
        self.assertTrue(recipe_instance.has_completed())
コード例 #10
0
    def test_get_nodes_to_process_input(self):
        """Tests calling Recipe.get_nodes_to_process_input()"""

        data_dict = convert_data_to_v6_json(Data()).get_dict()
        job_type = job_test_utils.create_seed_job_type()
        sub_recipe_type = recipe_test_utils.create_recipe_type_v6()

        # Create recipe
        definition = RecipeDefinition(Interface())
        cond_interface_1 = Interface()
        cond_interface_1.add_parameter(JsonParameter('cond_int', 'integer'))
        definition.add_job_node('A', job_type.name, job_type.version,
                                job_type.revision_num)
        df1 = DataFilter(filter_list=[{
            'name': 'cond_int',
            'type': 'integer',
            'condition': '==',
            'values': [0]
        }, {
            'name': 'cond_int',
            'type': 'integer',
            'condition': '!=',
            'values': [0]
        }],
                         all=False)  #always True
        df2 = DataFilter(filter_list=[{
            'name': 'cond_int',
            'type': 'integer',
            'condition': '==',
            'values': [0]
        }, {
            'name': 'cond_int',
            'type': 'integer',
            'condition': '!=',
            'values': [0]
        }],
                         all=True)  #always False
        definition.add_condition_node('B', cond_interface_1, df1)  #True
        definition.add_condition_node('C', cond_interface_1, df1)  #True
        definition.add_condition_node('D', cond_interface_1, df2)  #False
        definition.add_job_node('E', job_type.name, job_type.version,
                                job_type.revision_num)
        definition.add_job_node('F', job_type.name, job_type.version,
                                job_type.revision_num)
        definition.add_recipe_node('G', sub_recipe_type.name,
                                   sub_recipe_type.revision_num)
        definition.add_recipe_node('H', sub_recipe_type.name,
                                   sub_recipe_type.revision_num)
        definition.add_dependency('A', 'D')
        definition.add_dependency('A', 'E')
        definition.add_dependency('B', 'E')
        definition.add_dependency('B', 'F')
        definition.add_dependency('C', 'F')
        definition.add_dependency('D', 'G')
        definition.add_dependency('E', 'G')
        definition.add_dependency('E', 'H')
        definition_json_dict = convert_recipe_definition_to_v6_json(
            definition).get_dict()
        recipe_type = recipe_test_utils.create_recipe_type_v6(
            definition=definition_json_dict)
        recipe = recipe_test_utils.create_recipe(recipe_type=recipe_type,
                                                 input=data_dict)

        # Nodes A, B, and D already exist
        job_a = job_test_utils.create_job(job_type=job_type,
                                          status='COMPLETED',
                                          input=data_dict,
                                          output=data_dict,
                                          save=True)
        condition_b = recipe_test_utils.create_recipe_condition(
            is_processed=True, is_accepted=True, save=False)
        condition_d = recipe_test_utils.create_recipe_condition(
            is_processed=True, is_accepted=False, save=False)
        RecipeCondition.objects.bulk_create([condition_b, condition_d])
        recipe_node_a = recipe_test_utils.create_recipe_node(recipe=recipe,
                                                             node_name='A',
                                                             job=job_a,
                                                             save=False)
        recipe_node_b = recipe_test_utils.create_recipe_node(
            recipe=recipe, node_name='B', condition=condition_b, save=False)
        recipe_node_d = recipe_test_utils.create_recipe_node(
            recipe=recipe, node_name='D', condition=condition_d, save=False)
        RecipeNode.objects.bulk_create(
            [recipe_node_a, recipe_node_b, recipe_node_d])

        recipe_instance = Recipe.objects.get_recipe_instance(recipe.id)
        nodes_to_process = recipe_instance.get_nodes_to_process_input()
        self.assertSetEqual(set(nodes_to_process.keys()), {'C', 'E'})
コード例 #11
0
    def test_init_identical(self):
        """Tests creating a RecipeDiff between two identical recipe definitions"""

        interface_1 = Interface()
        interface_1.add_parameter(FileParameter('file_param_1', ['image/gif']))
        interface_1.add_parameter(JsonParameter('json_param_1', 'object'))
        interface_2 = Interface()
        interface_2.add_parameter(FileParameter('file_param_1', ['image/gif']))
        interface_2.add_parameter(JsonParameter('json_param_1', 'object'))

        cond_interface_1 = Interface()
        cond_interface_1.add_parameter(FileParameter('cond_file', ['image/gif']))
        filter_1 = DataFilter(filter_list=[{'name': 'cond_file', 'type': 'filename', 'condition': 'contains', 'values': ['good_name.gif']}])
        cond_interface_2 = Interface()
        cond_interface_2.add_parameter(FileParameter('cond_file', ['image/gif']))
        filter_2 = DataFilter(filter_list=[{'name': 'cond_file', 'type': 'filename', 'condition': 'contains', 'values': ['good_name.gif']}])

        definition_1 = RecipeDefinition(interface_1)
        definition_1.add_job_node('A', 'job_type_1', '1.0', 1)
        definition_1.add_job_node('B', 'job_type_2', '2.0', 1)
        definition_1.add_job_node('C', 'job_type_3', '1.0', 2)
        definition_1.add_recipe_node('D', 'recipe_type_1', 1)
        definition_1.add_condition_node('E', cond_interface_1, filter_1)
        definition_1.add_job_node('F', 'job_type_4', '1.0', 1)
        definition_1.add_dependency('A', 'B')
        definition_1.add_dependency('A', 'C')
        definition_1.add_dependency('C', 'D')
        definition_1.add_dependency('A', 'E')
        definition_1.add_dependency('E', 'F')
        definition_1.add_recipe_input_connection('A', 'input_1', 'file_param_1')
        definition_1.add_dependency_input_connection('B', 'b_input_1', 'A', 'a_output_1')
        definition_1.add_dependency_input_connection('C', 'c_input_1', 'A', 'a_output_2')
        definition_1.add_dependency_input_connection('D', 'd_input_1', 'C', 'c_output_1')
        definition_1.add_recipe_input_connection('D', 'd_input_2', 'json_param_1')
        definition_1.add_dependency_input_connection('E', 'cond_file', 'A', 'a_output_1')
        definition_1.add_dependency_input_connection('F', 'f_input_1', 'E', 'cond_file')

        definition_2 = RecipeDefinition(interface_2)
        definition_2.add_job_node('A', 'job_type_1', '1.0', 1)
        definition_2.add_job_node('B', 'job_type_2', '2.0', 1)
        definition_2.add_job_node('C', 'job_type_3', '1.0', 2)
        definition_2.add_recipe_node('D', 'recipe_type_1', 1)
        definition_2.add_condition_node('E', cond_interface_2, filter_2)
        definition_2.add_job_node('F', 'job_type_4', '1.0', 1)
        definition_2.add_dependency('A', 'B')
        definition_2.add_dependency('A', 'C')
        definition_2.add_dependency('C', 'D')
        definition_2.add_dependency('A', 'E')
        definition_2.add_dependency('E', 'F')
        definition_2.add_recipe_input_connection('A', 'input_1', 'file_param_1')
        definition_2.add_dependency_input_connection('B', 'b_input_1', 'A', 'a_output_1')
        definition_2.add_dependency_input_connection('C', 'c_input_1', 'A', 'a_output_2')
        definition_2.add_dependency_input_connection('D', 'd_input_1', 'C', 'c_output_1')
        definition_2.add_recipe_input_connection('D', 'd_input_2', 'json_param_1')
        definition_2.add_dependency_input_connection('E', 'cond_file', 'A', 'a_output_1')
        definition_2.add_dependency_input_connection('F', 'f_input_1', 'E', 'cond_file')

        diff = RecipeDiff(definition_1, definition_2)

        self.assertTrue(diff.can_be_reprocessed)
        self.assertListEqual(diff.reasons, [])
        # Every node should be unchanged and all should be copied during a reprocess
        nodes_to_copy = diff.get_nodes_to_copy()
        self.assertSetEqual(set(nodes_to_copy.keys()), {'A', 'B', 'C', 'D', 'E', 'F'})
        for node_diff in nodes_to_copy.values():
            self.assertEqual(node_diff.status, NodeDiff.UNCHANGED)
            self.assertFalse(node_diff.reprocess_new_node)
            self.assertListEqual(node_diff.changes, [])
        self.assertDictEqual(diff.get_nodes_to_supersede(), {})
        self.assertDictEqual(diff.get_nodes_to_unpublish(), {})
コード例 #12
0
    def test_init_changes(self):
        """Tests creating a RecipeDiff when the newer definition has a variety of changes in it"""

        interface_1 = Interface()
        interface_1.add_parameter(FileParameter('file_param_1', ['image/gif']))
        interface_1.add_parameter(JsonParameter('json_param_1', 'object'))
        interface_2 = Interface()
        interface_2.add_parameter(FileParameter('file_param_1', ['image/gif']))
        interface_2.add_parameter(JsonParameter('json_param_1', 'object'))
        interface_2.add_parameter(JsonParameter('json_param_2', 'object', required=False))

        cond_interface_1 = Interface()
        cond_interface_1.add_parameter(FileParameter('cond_file', ['image/gif']))
        filter_1 = DataFilter(all=True)
        cond_interface_2 = Interface()
        cond_interface_2.add_parameter(FileParameter('cond_file', ['image/gif']))
        filter_2 = DataFilter(all=False)

        definition_1 = RecipeDefinition(interface_1)
        definition_1.add_job_node('A', 'job_type_1', '1.0', 1)
        definition_1.add_job_node('B', 'job_type_2', '2.0', 1)
        definition_1.add_job_node('C', 'job_type_3', '1.0', 2)
        definition_1.add_recipe_node('D', 'recipe_type_1', 1)
        definition_1.add_job_node('E', 'job_type_4', '1.0', 1)
        definition_1.add_condition_node('G', cond_interface_1, filter_1)
        definition_1.add_job_node('H', 'job_type_4', '1.0', 1)
        definition_1.add_dependency('A', 'B')
        definition_1.add_dependency('A', 'C')
        definition_1.add_dependency('B', 'E')
        definition_1.add_dependency('C', 'D')
        definition_1.add_dependency('A', 'G')
        definition_1.add_dependency('G', 'H')
        definition_1.add_recipe_input_connection('A', 'input_1', 'file_param_1')
        definition_1.add_dependency_input_connection('B', 'b_input_1', 'A', 'a_output_1')
        definition_1.add_dependency_input_connection('C', 'c_input_1', 'A', 'a_output_2')
        definition_1.add_dependency_input_connection('D', 'd_input_1', 'C', 'c_output_1')
        definition_1.add_recipe_input_connection('D', 'd_input_2', 'json_param_1')
        definition_1.add_dependency_input_connection('G', 'cond_file', 'A', 'a_output_1')
        definition_1.add_dependency_input_connection('H', 'h_input_1', 'G', 'cond_file')

        definition_2 = RecipeDefinition(interface_2)
        # Nodes B and E are deleted
        definition_2.add_job_node('A', 'job_type_1', '1.0', 1)
        definition_2.add_job_node('C', 'job_type_3', '2.1', 1)  # Change to job type version and revision
        definition_2.add_recipe_node('D', 'recipe_type_1', 1)
        definition_2.add_condition_node('G', cond_interface_2, filter_2)
        definition_2.add_job_node('H', 'job_type_4', '1.0', 1)
        definition_2.add_recipe_node('F', 'recipe_type_2', 5)  # New node
        definition_2.add_dependency('A', 'C')
        definition_2.add_dependency('C', 'D')
        definition_2.add_dependency('D', 'F')
        definition_2.add_dependency('A', 'G')
        definition_2.add_dependency('G', 'H', False) # Change to fire when condition is False, not True
        definition_2.add_recipe_input_connection('A', 'input_1', 'file_param_1')
        definition_2.add_dependency_input_connection('C', 'c_input_1', 'A', 'a_output_2')
        definition_2.add_dependency_input_connection('D', 'd_input_1', 'C', 'c_output_1')
        definition_2.add_recipe_input_connection('D', 'd_input_2', 'json_param_1')
        definition_2.add_recipe_input_connection('F', 'f_input_1', 'json_param_2')
        definition_2.add_dependency_input_connection('G', 'cond_file', 'A', 'a_output_1')
        definition_2.add_dependency_input_connection('H', 'h_input_1', 'G', 'cond_file')

        diff = RecipeDiff(definition_1, definition_2)

        # Non-breaking recipe input changes so recipe can be reprocessed
        self.assertTrue(diff.can_be_reprocessed)
        self.assertListEqual(diff.reasons, [])
        # Check each node for correct fields
        node_a = diff.graph['A']
        self.assertEqual(node_a.status, NodeDiff.UNCHANGED)
        self.assertFalse(node_a.reprocess_new_node)
        self.assertListEqual(node_a.changes, [])
        node_b = diff.graph['B']
        self.assertEqual(node_b.status, NodeDiff.DELETED)
        self.assertFalse(node_b.reprocess_new_node)
        self.assertListEqual(node_b.changes, [])
        node_c = diff.graph['C']
        self.assertEqual(node_c.status, NodeDiff.CHANGED)
        self.assertTrue(node_c.reprocess_new_node)
        self.assertEqual(len(node_c.changes), 2)
        self.assertEqual(node_c.changes[0].name, 'JOB_TYPE_VERSION_CHANGE')
        self.assertEqual(node_c.changes[1].name, 'JOB_TYPE_REVISION_CHANGE')
        node_d = diff.graph['D']
        self.assertEqual(node_d.status, NodeDiff.CHANGED)
        self.assertTrue(node_d.reprocess_new_node)
        self.assertEqual(len(node_d.changes), 1)
        self.assertEqual(node_d.changes[0].name, 'PARENT_CHANGED')
        node_e = diff.graph['E']
        self.assertEqual(node_e.status, NodeDiff.DELETED)
        self.assertFalse(node_e.reprocess_new_node)
        self.assertListEqual(node_e.changes, [])
        node_f = diff.graph['F']
        self.assertEqual(node_f.status, NodeDiff.NEW)
        self.assertTrue(node_f.reprocess_new_node)
        self.assertListEqual(node_f.changes, [])
        node_g = diff.graph['G']
        self.assertEqual(node_g.status, NodeDiff.CHANGED)
        self.assertTrue(node_g.reprocess_new_node)
        self.assertEqual(len(node_g.changes), 1)
        self.assertEqual(node_g.changes[0].name, 'FILTER_CHANGE')
        node_h = diff.graph['H']
        self.assertEqual(node_h.status, NodeDiff.CHANGED)
        self.assertTrue(node_h.reprocess_new_node)
        self.assertEqual(len(node_h.changes), 2)
        self.assertEqual(node_h.changes[0].name, 'PARENT_CHANGED')
        self.assertEqual(node_h.changes[1].name, 'PARENT_ACCEPTANCE_CHANGED')
        # Check nodes to copy, supersede, and unpublish
        self.assertSetEqual(set(diff.get_nodes_to_copy().keys()), {'A'})
        self.assertSetEqual(set(diff.get_nodes_to_supersede().keys()), {'B', 'C', 'D', 'E', 'G', 'H'})
        self.assertSetEqual(set(diff.get_nodes_to_unpublish().keys()), {'B', 'E'})
コード例 #13
0
    def test_execute(self):
        """Tests calling ProcessCondition.execute() successfully"""

        workspace = storage_test_utils.create_workspace()
        file_1 = storage_test_utils.create_file(workspace=workspace,
                                                file_size=104857600.0)
        file_2 = storage_test_utils.create_file(workspace=workspace,
                                                file_size=987654321.0)
        file_3 = storage_test_utils.create_file(workspace=workspace,
                                                file_size=65456.0)
        file_4 = storage_test_utils.create_file(workspace=workspace,
                                                file_size=24564165456.0)
        manifest_1 = {
            'seedVersion': '1.0.0',
            'job': {
                'name': 'job-a',
                'jobVersion': '1.0.0',
                'packageVersion': '1.0.0',
                'title': '',
                'description': '',
                'maintainer': {
                    'name': 'John Doe',
                    'email': '*****@*****.**'
                },
                'timeout': 10,
                'interface': {
                    'command': '',
                    'inputs': {
                        'files': [],
                        'json': []
                    },
                    'outputs': {
                        'files': [{
                            'name': 'OUTPUT_A',
                            'pattern': '*.png',
                            'multiple': True
                        }]
                    }
                }
            }
        }
        job_type_1 = job_test_utils.create_job_type(interface=manifest_1)
        manifest_2 = {
            'seedVersion': '1.0.0',
            'job': {
                'name': 'job-b',
                'jobVersion': '1.0.0',
                'packageVersion': '1.0.0',
                'title': '',
                'description': '',
                'maintainer': {
                    'name': 'John Doe',
                    'email': '*****@*****.**'
                },
                'timeout': 10,
                'interface': {
                    'command': '',
                    'inputs': {
                        'files': []
                    },
                    'outputs': {
                        'files': [{
                            'name': 'OUTPUT_B',
                            'pattern': '*.png',
                            'multiple': True
                        }]
                    }
                }
            }
        }
        job_type_2 = job_test_utils.create_job_type(interface=manifest_2)
        output_1_dict = {
            'version':
            '1.0',
            'output_data': [{
                'name': 'OUTPUT_A',
                'file_ids': [file_1.id, file_2.id]
            }]
        }
        output_2_dict = {
            'version':
            '1.0',
            'output_data': [{
                'name': 'OUTPUT_B',
                'file_ids': [file_3.id, file_4.id]
            }]
        }

        cond_interface = Interface()
        cond_interface.add_parameter(
            FileParameter('INPUT_C_1', [], multiple=True))
        cond_interface.add_parameter(
            FileParameter('INPUT_C_2', [], multiple=True))
        definition = RecipeDefinition(Interface())
        definition.add_job_node('node_a', job_type_1.name, job_type_1.version,
                                job_type_1.revision_num)
        definition.add_job_node('node_b', job_type_2.name, job_type_2.version,
                                job_type_2.revision_num)
        # TODO: once DataFilter is implemented, create a DataFilter object here that accepts the inputs
        definition.add_condition_node('node_c', cond_interface,
                                      DataFilter(True))
        definition.add_dependency('node_a', 'node_c')
        definition.add_dependency('node_b', 'node_c')
        definition.add_dependency_input_connection('node_c', 'INPUT_C_1',
                                                   'node_a', 'OUTPUT_A')
        definition.add_dependency_input_connection('node_c', 'INPUT_C_2',
                                                   'node_b', 'OUTPUT_B')
        def_dict = convert_recipe_definition_to_v6_json(definition).get_dict()
        recipe_type = recipe_test_utils.create_recipe_type(definition=def_dict)
        recipe_data_dict = {
            'version': '1.0',
            'input_data': [],
            'workspace_id': workspace.id
        }
        recipe = recipe_test_utils.create_recipe(recipe_type=recipe_type,
                                                 input=recipe_data_dict)
        job_1 = job_test_utils.create_job(job_type=job_type_1,
                                          num_exes=1,
                                          status='COMPLETED',
                                          output=output_1_dict,
                                          recipe=recipe)
        job_2 = job_test_utils.create_job(job_type=job_type_2,
                                          num_exes=1,
                                          status='COMPLETED',
                                          output=output_2_dict,
                                          recipe=recipe)
        condition = recipe_test_utils.create_recipe_condition(recipe=recipe,
                                                              save=True)
        node_a = recipe_test_utils.create_recipe_node(recipe=recipe,
                                                      node_name='node_a',
                                                      job=job_1,
                                                      save=False)
        node_b = recipe_test_utils.create_recipe_node(recipe=recipe,
                                                      node_name='node_b',
                                                      job=job_2,
                                                      save=False)
        node_c = recipe_test_utils.create_recipe_node(recipe=recipe,
                                                      node_name='node_c',
                                                      condition=condition,
                                                      save=False)
        RecipeNode.objects.bulk_create([node_a, node_b, node_c])

        # Create message
        message = create_process_condition_messages([condition.id])[0]

        # Execute message
        result = message.execute()
        self.assertTrue(result)

        condition = RecipeCondition.objects.get(id=condition.id)
        # Check for update_recipe message
        self.assertEqual(len(message.new_messages), 1)
        self.assertEqual(message.new_messages[0].type, 'update_recipe')
        self.assertEqual(message.new_messages[0].root_recipe_id, recipe.id)

        # Check condition flags
        self.assertTrue(condition.is_processed)
        self.assertIsNotNone(condition.processed)
        self.assertTrue(condition.is_accepted)
        # Check condition for expected data
        self.assertSetEqual(set(condition.get_data().values.keys()),
                            {'INPUT_C_1', 'INPUT_C_2'})
        self.assertListEqual(condition.get_data().values['INPUT_C_1'].file_ids,
                             [file_1.id, file_2.id])
        self.assertListEqual(condition.get_data().values['INPUT_C_2'].file_ids,
                             [file_3.id, file_4.id])

        # Test executing message again
        message_json_dict = message.to_json()
        message = ProcessCondition.from_json(message_json_dict)
        result = message.execute()
        self.assertTrue(result)

        # Still should have update_recipe message
        self.assertEqual(len(message.new_messages), 1)
        self.assertEqual(message.new_messages[0].type, 'update_recipe')
        self.assertEqual(message.new_messages[0].root_recipe_id, recipe.id)
コード例 #14
0
ファイル: test_diff_v6.py プロジェクト: ctc-oss/scale
    def test_convert_recipe_diff_to_v6_json_with_changes(self):
        """Tests calling convert_recipe_diff_to_v6_json() with a diff containing a variety of changes"""

        interface_1 = Interface()
        interface_1.add_parameter(FileParameter('file_param_1', ['image/gif']))
        interface_1.add_parameter(JsonParameter('json_param_1', 'object'))
        interface_2 = Interface()
        interface_2.add_parameter(FileParameter('file_param_1', ['image/gif']))
        interface_2.add_parameter(JsonParameter('json_param_1', 'object'))
        interface_2.add_parameter(
            JsonParameter('json_param_2', 'object', required=False))

        cond_interface_1 = Interface()
        cond_interface_1.add_parameter(
            FileParameter('cond_file', ['image/gif']))
        # TODO: eventually implement two "real" and different filters
        filter_1 = DataFilter(False)
        cond_interface_2 = Interface()
        cond_interface_2.add_parameter(
            FileParameter('cond_file', ['image/gif']))
        filter_2 = DataFilter(True)

        definition_1 = RecipeDefinition(interface_1)
        definition_1.add_job_node('A', 'job_type_1', '1.0', 1)
        definition_1.add_job_node('B', 'job_type_2', '2.0', 1)
        definition_1.add_job_node('C', 'job_type_3', '1.0', 2)
        definition_1.add_recipe_node('D', 'recipe_type_1', 1)
        definition_1.add_job_node('E', 'job_type_4', '1.0', 1)
        definition_1.add_condition_node('G', cond_interface_1, filter_1)
        definition_1.add_job_node('H', 'job_type_4', '1.0', 1)
        definition_1.add_dependency('A', 'B')
        definition_1.add_dependency('A', 'C')
        definition_1.add_dependency('B', 'E')
        definition_1.add_dependency('C', 'D')
        definition_1.add_dependency('A', 'G')
        definition_1.add_dependency('G', 'H')
        definition_1.add_recipe_input_connection('A', 'input_1',
                                                 'file_param_1')
        definition_1.add_dependency_input_connection('B', 'b_input_1', 'A',
                                                     'a_output_1')
        definition_1.add_dependency_input_connection('C', 'c_input_1', 'A',
                                                     'a_output_2')
        definition_1.add_dependency_input_connection('D', 'd_input_1', 'C',
                                                     'c_output_1')
        definition_1.add_recipe_input_connection('D', 'd_input_2',
                                                 'json_param_1')
        definition_1.add_dependency_input_connection('G', 'cond_file', 'A',
                                                     'a_output_1')
        definition_1.add_dependency_input_connection('H', 'h_input_1', 'G',
                                                     'cond_file')

        definition_2 = RecipeDefinition(interface_2)
        # Nodes B and E are deleted
        definition_2.add_job_node('A', 'job_type_1', '1.0', 1)
        definition_2.add_job_node('C', 'job_type_3', '2.1',
                                  1)  # Change to job type version and revision
        definition_2.add_recipe_node('D', 'recipe_type_1', 1)
        definition_2.add_condition_node('G', cond_interface_2, filter_2)
        definition_2.add_job_node('H', 'job_type_4', '1.0', 1)
        definition_2.add_recipe_node('F', 'recipe_type_2', 5)  # New node
        definition_2.add_dependency('A', 'C')
        definition_2.add_dependency('C', 'D')
        definition_2.add_dependency('D', 'F')
        definition_2.add_dependency('A', 'G')
        definition_2.add_dependency('G', 'H')
        definition_2.add_recipe_input_connection('A', 'input_1',
                                                 'file_param_1')
        definition_2.add_dependency_input_connection('C', 'c_input_1', 'A',
                                                     'a_output_2')
        definition_2.add_dependency_input_connection('D', 'd_input_1', 'C',
                                                     'c_output_1')
        definition_2.add_recipe_input_connection('D', 'd_input_2',
                                                 'json_param_1')
        definition_2.add_recipe_input_connection('F', 'f_input_1',
                                                 'json_param_2')
        definition_2.add_dependency_input_connection('G', 'cond_file', 'A',
                                                     'a_output_1')
        definition_2.add_dependency_input_connection('H', 'h_input_1', 'G',
                                                     'cond_file')

        diff = RecipeDiff(definition_1, definition_2)
        json = convert_recipe_diff_to_v6_json(diff)
        RecipeDiffV6(diff=json.get_dict(), do_validate=True)  # Revalidate
        self.assertTrue(json.get_dict()['can_be_reprocessed'])
コード例 #15
0
    def test_execute(self):
        """Tests calling UpdateRecipe.execute() successfully"""

        data_dict = convert_data_to_v6_json(Data()).get_dict()
        job_a = job_test_utils.create_job(status='COMPLETED', input=data_dict, output=data_dict)
        recipe_b = recipe_test_utils.create_recipe()
        job_c = job_test_utils.create_job(status='PENDING')
        job_d = job_test_utils.create_job(status='BLOCKED')
        recipe_type_e = recipe_test_utils.create_recipe_type_v6()
        job_type_f = job_test_utils.create_seed_job_type()
        job_type_k = job_test_utils.create_seed_job_type()
        job_g = job_test_utils.create_job(status='FAILED', input=data_dict)
        job_h = job_test_utils.create_job(status='PENDING')
        condition_i = recipe_test_utils.create_recipe_condition(save=True)
        definition = RecipeDefinition(Interface())
        definition.add_job_node('node_a', job_a.job_type.name, job_a.job_type.version, job_a.job_type_rev.revision_num)
        definition.add_recipe_node('node_b', recipe_b.recipe_type.name, recipe_b.recipe_type.revision_num)
        definition.add_job_node('node_c', job_c.job_type.name, job_c.job_type.version, job_c.job_type_rev.revision_num)
        definition.add_job_node('node_d', job_d.job_type.name, job_d.job_type.version, job_d.job_type_rev.revision_num)
        definition.add_recipe_node('node_e', recipe_type_e.name, recipe_type_e.revision_num)
        definition.add_job_node('node_f', job_type_f.name, job_type_f.version, job_type_f.revision_num)
        definition.add_job_node('node_g', job_g.job_type.name, job_g.job_type.version, job_g.job_type_rev.revision_num)
        definition.add_job_node('node_h', job_h.job_type.name, job_h.job_type.version, job_h.job_type_rev.revision_num)
        definition.add_condition_node('node_i', Interface(), DataFilter()) #True
        definition.add_condition_node('node_j', Interface(), DataFilter()) #True
        definition.add_job_node('node_k', job_type_k.name, job_type_k.version, job_type_k.revision_num)
        definition.add_dependency('node_a', 'node_c')
        definition.add_dependency('node_a', 'node_e')
        definition.add_dependency('node_a', 'node_g')
        definition.add_dependency('node_c', 'node_d')
        definition.add_dependency('node_e', 'node_f')
        definition.add_dependency('node_g', 'node_h')
        definition.add_dependency('node_a', 'node_i')
        definition.add_dependency('node_a', 'node_j')
        definition.add_dependency('node_i', 'node_k')
        definition.add_dependency('node_j', 'node_k')
        definition_dict = convert_recipe_definition_to_v6_json(definition).get_dict()
        recipe_type = recipe_test_utils.create_recipe_type_v6(definition=definition_dict)
        recipe = recipe_test_utils.create_recipe(recipe_type=recipe_type, input=data_dict)
        node_a = recipe_test_utils.create_recipe_node(recipe=recipe, node_name='node_a', job=job_a, save=False)
        node_b = recipe_test_utils.create_recipe_node(recipe=recipe, node_name='node_b', sub_recipe=recipe_b,
                                                      save=False)
        node_c = recipe_test_utils.create_recipe_node(recipe=recipe, node_name='node_c', job=job_c, save=False)
        node_d = recipe_test_utils.create_recipe_node(recipe=recipe, node_name='node_d', job=job_d, save=False)
        node_g = recipe_test_utils.create_recipe_node(recipe=recipe, node_name='node_g', job=job_g, save=False)
        node_h = recipe_test_utils.create_recipe_node(recipe=recipe, node_name='node_h', job=job_h, save=False)
        node_i = recipe_test_utils.create_recipe_node(recipe=recipe, node_name='node_i', condition=condition_i,
                                                      save=False)
        RecipeNode.objects.bulk_create([node_a, node_b, node_c, node_d, node_g, node_h, node_i])
        forced_nodes = ForcedNodes()
        forced_nodes_e = ForcedNodes()
        forced_nodes_e.set_all_nodes()
        forced_nodes.add_subrecipe('node_e', forced_nodes_e)

        # Create and execute message
        message = create_update_recipe_message(recipe.id, forced_nodes=forced_nodes)
        result = message.execute()
        self.assertTrue(result)

        self.assertEqual(len(message.new_messages), 8)
        # Check messages
        blocked_jobs_msg = None
        pending_jobs_msg = None
        create_cond_msg = None
        create_jobs_msg = None
        create_recipes_msg = None
        process_condition_msg = None
        process_job_input_msg = None
        process_recipe_input_msg = None
        for msg in message.new_messages:
            if msg.type == 'blocked_jobs':
                blocked_jobs_msg = msg
            elif msg.type == 'pending_jobs':
                pending_jobs_msg = msg
            elif msg.type == 'create_conditions':
                create_cond_msg = msg
            elif msg.type == 'create_jobs':
                create_jobs_msg = msg
            elif msg.type == 'create_recipes':
                create_recipes_msg = msg
            elif msg.type == 'process_condition':
                process_condition_msg = msg
            elif msg.type == 'process_job_input':
                process_job_input_msg = msg
            elif msg.type == 'process_recipe_input':
                process_recipe_input_msg = msg
        self.assertIsNotNone(blocked_jobs_msg)
        self.assertIsNotNone(pending_jobs_msg)
        self.assertIsNotNone(create_cond_msg)
        self.assertIsNotNone(create_jobs_msg)
        self.assertIsNotNone(create_recipes_msg)
        self.assertIsNotNone(process_condition_msg)
        self.assertIsNotNone(process_job_input_msg)
        self.assertIsNotNone(process_recipe_input_msg)
        # Check message to change jobs to BLOCKED
        self.assertListEqual(blocked_jobs_msg._blocked_job_ids, [job_h.id])
        # Check message to change jobs to PENDING
        self.assertListEqual(pending_jobs_msg._pending_job_ids, [job_d.id])
        # Check message to create conditions
        self.assertEqual(create_cond_msg.recipe_id, recipe.id)
        self.assertEqual(create_cond_msg.root_recipe_id, recipe.root_superseded_recipe_id)
        condition = Condition('node_j', True)
        self.assertListEqual(create_cond_msg.conditions, [condition])
        # Check message to create jobs
        self.assertEqual(create_jobs_msg.event_id, recipe.event_id)
        self.assertEqual(create_jobs_msg.create_jobs_type, RECIPE_TYPE)
        self.assertEqual(create_jobs_msg.recipe_id, recipe.id)
        self.assertEqual(create_jobs_msg.root_recipe_id, recipe.root_superseded_recipe_id)
        self.assertIsNone(create_jobs_msg.superseded_recipe_id)
        recipe_job = RecipeJob(job_type_f.name, job_type_f.version, job_type_f.revision_num, 'node_f', False)
        self.assertListEqual(create_jobs_msg.recipe_jobs, [recipe_job])
        # Check message to create sub-recipes
        self.assertEqual(create_recipes_msg.event_id, recipe.event_id)
        msg_forced_nodes_dict = convert_forced_nodes_to_v6(create_recipes_msg.forced_nodes).get_dict()
        expected_forced_nodes_dict = convert_forced_nodes_to_v6(forced_nodes).get_dict()
        self.assertDictEqual(msg_forced_nodes_dict, expected_forced_nodes_dict)
        self.assertEqual(create_recipes_msg.create_recipes_type, SUB_RECIPE_TYPE)
        self.assertEqual(create_recipes_msg.recipe_id, recipe.id)
        self.assertEqual(create_recipes_msg.root_recipe_id, recipe.root_superseded_recipe_id)
        self.assertIsNone(create_recipes_msg.superseded_recipe_id)
        sub = SubRecipe(recipe_type_e.name, recipe_type_e.revision_num, 'node_e', True)
        self.assertListEqual(create_recipes_msg.sub_recipes, [sub])
        # Check message to process condition
        self.assertEqual(process_condition_msg.condition_id, condition_i.id)
        # Check message to process job input
        self.assertEqual(process_job_input_msg.job_id, job_c.id)
        # Check message to process recipe input
        self.assertEqual(process_recipe_input_msg.recipe_id, recipe_b.id)

        # Test executing message again
        message_json_dict = message.to_json()
        message = UpdateRecipe.from_json(message_json_dict)
        result = message.execute()
        self.assertTrue(result)

        # Make sure the same messages are returned
        self.assertEqual(len(message.new_messages), 8)
        blocked_jobs_msg = None
        pending_jobs_msg = None
        create_cond_msg = None
        create_jobs_msg = None
        create_recipes_msg = None
        process_condition_msg = None
        process_job_input_msg = None
        process_recipe_input_msg = None
        for msg in message.new_messages:
            if msg.type == 'blocked_jobs':
                blocked_jobs_msg = msg
            elif msg.type == 'pending_jobs':
                pending_jobs_msg = msg
            elif msg.type == 'create_conditions':
                create_cond_msg = msg
            elif msg.type == 'create_jobs':
                create_jobs_msg = msg
            elif msg.type == 'create_recipes':
                create_recipes_msg = msg
            elif msg.type == 'process_condition':
                process_condition_msg = msg
            elif msg.type == 'process_job_input':
                process_job_input_msg = msg
            elif msg.type == 'process_recipe_input':
                process_recipe_input_msg = msg
        self.assertIsNotNone(blocked_jobs_msg)
        self.assertIsNotNone(pending_jobs_msg)
        self.assertIsNotNone(create_cond_msg)
        self.assertIsNotNone(create_jobs_msg)
        self.assertIsNotNone(create_recipes_msg)
        self.assertIsNotNone(process_condition_msg)
        self.assertIsNotNone(process_job_input_msg)
        self.assertIsNotNone(process_recipe_input_msg)
        # Check message to change jobs to BLOCKED
        self.assertListEqual(blocked_jobs_msg._blocked_job_ids, [job_h.id])
        # Check message to change jobs to PENDING
        self.assertListEqual(pending_jobs_msg._pending_job_ids, [job_d.id])
        # Check message to create conditions
        self.assertEqual(create_cond_msg.recipe_id, recipe.id)
        self.assertEqual(create_cond_msg.root_recipe_id, recipe.root_superseded_recipe_id)
        condition = Condition('node_j', True)
        self.assertListEqual(create_cond_msg.conditions, [condition])
        # Check message to create jobs
        self.assertEqual(create_jobs_msg.event_id, recipe.event_id)
        self.assertEqual(create_jobs_msg.create_jobs_type, RECIPE_TYPE)
        self.assertEqual(create_jobs_msg.recipe_id, recipe.id)
        self.assertEqual(create_jobs_msg.root_recipe_id, recipe.root_superseded_recipe_id)
        self.assertIsNone(create_jobs_msg.superseded_recipe_id)
        recipe_job = RecipeJob(job_type_f.name, job_type_f.version, job_type_f.revision_num, 'node_f', False)
        self.assertListEqual(create_jobs_msg.recipe_jobs, [recipe_job])
        # Check message to create sub-recipes
        self.assertEqual(create_recipes_msg.event_id, recipe.event_id)
        msg_forced_nodes_dict = convert_forced_nodes_to_v6(create_recipes_msg.forced_nodes).get_dict()
        expected_forced_nodes_dict = convert_forced_nodes_to_v6(forced_nodes).get_dict()
        self.assertDictEqual(msg_forced_nodes_dict, expected_forced_nodes_dict)
        self.assertEqual(create_recipes_msg.create_recipes_type, SUB_RECIPE_TYPE)
        self.assertEqual(create_recipes_msg.recipe_id, recipe.id)
        self.assertEqual(create_recipes_msg.root_recipe_id, recipe.root_superseded_recipe_id)
        self.assertIsNone(create_recipes_msg.superseded_recipe_id)
        sub = SubRecipe(recipe_type_e.name, recipe_type_e.revision_num, 'node_e', True)
        self.assertListEqual(create_recipes_msg.sub_recipes, [sub])
        # Check message to process condition
        self.assertEqual(process_condition_msg.condition_id, condition_i.id)
        # Check message to process job input
        self.assertEqual(process_job_input_msg.job_id, job_c.id)
        # Check message to process recipe input
        self.assertEqual(process_recipe_input_msg.recipe_id, recipe_b.id)