from ...utils import merge_dicts
from ...utils import swallow_logs
from ...tests.utils import assert_in
from ...tests.skip import mark
from reproman.tests.fixtures import get_docker_fixture
from ...consts import TEST_SSH_DOCKER_DIGEST
# Skip entire module if no SSH is available.
pytestmark = mark.skipif_no_ssh
setup_ssh = get_docker_fixture(
TEST_SSH_DOCKER_DIGEST,
portmaps={
49000: 22
},
custom_params={
'host': 'localhost',
'user': '******',
'port': 49000
},
scope='module'
)
def test_setup_ssh(setup_ssh):
# Rudimentary smoke test for setup_ssh so we have
# multiple uses for the setup_ssh
assert 'port' in setup_ssh['custom']
assert setup_ssh['custom']['host'] == 'localhost'
def test_ssh_class(setup_ssh, resource_test_dir, resman):
import logging
from unittest.mock import patch, MagicMock, call
from ...utils import merge_dicts
from ...utils import swallow_logs
from ...tests.utils import assert_in
from ...tests.skip import mark
from ...support.exceptions import ResourceError
from ...consts import TEST_SSH_DOCKER_DIGEST
from reproman.tests.fixtures import get_docker_fixture
from pytest import raises
setup_ubuntu = get_docker_fixture(TEST_SSH_DOCKER_DIGEST,
scope='module',
name='reproman-test-ssh-container')
@mark.skipif_no_docker_dependencies
def test_dockercontainer_class(resman):
with patch('docker.APIClient') as client, \
patch('dockerpty.start') as dockerpty, \
swallow_logs(new_level=logging.DEBUG) as log:
client.return_value = MagicMock(
containers=lambda all: [{
'Id': '326b0fdfbf83',
'Names': ['/existing-test-resource'],
'State': 'running'
from reproman.tests.skip import mark
from reproman.tests.skip import skipif
from reproman.tests.utils import create_tree
try:
lsf_config = os.environ['REPROMAN_LSF_TEST_CONFIG'].split(':')
lsf_config = {
"host": lsf_config[0],
"user": lsf_config[1],
"tmpdir_root": lsf_config[2]
}
except (KeyError, ValueError):
lsf_config = None
docker_container = get_docker_fixture(TEST_SSH_DOCKER_DIGEST,
name="testing-container",
scope="module")
@pytest.fixture(scope="module")
def docker_resource(docker_container):
# TODO: This could be reworked to be included in fixtures.py. It is similar
# to get_singularity_fixture, which should probably be renamed to include
# "resource".
from reproman.resource.docker_container import DockerContainer
return DockerContainer("testing-container")
@pytest.fixture(scope="module")
def shell():
return Shell("localshell")
