def rcode_directive(name, arguments, options, content, lineno,
content_offset, block_text, state, state_machine):
for line in content:
shell.process(line)
output = shell.astext().split('\n')
if options.has_key('silent'):
silent = True
else:
silent = False
if options.has_key('source'):
lines = content
else:
lines = output
if len(lines) and not silent:
r_lines = ['.. code-block:: r', '']
r_lines.extend([u' %s'%line for line in lines])
r_lines.append('')
state_machine.insert_input(
r_lines, state_machine.input_lines.source(0))
return []
def rcode_directive(name, arguments, options, content, lineno, content_offset,
block_text, state, state_machine):
for line in content:
shell.process(line)
output = shell.astext().split('\n')
if options.has_key('silent'):
silent = True
else:
silent = False
if options.has_key('source'):
lines = content
else:
lines = output
if len(lines) and not silent:
r_lines = ['.. code-block:: r', '']
r_lines.extend([u' %s' % line for line in lines])
r_lines.append('')
state_machine.insert_input(r_lines,
state_machine.input_lines.source(0))
return []
def rcode_directive(name, arguments, options, content, lineno, content_offset,
block_text, state, state_machine):
if len(arguments) == 1: # it is a filename
content = [file(arguments[0]).read()]
shell.astext()
contentstr = '\n'.join([c for c in content])
m = md5()
m.update(contentstr)
hash = m.hexdigest()[-10:]
force = options.pop('force', False) # if present in options, force is None
if not os.path.exists("images/inline/%s.Routput" % hash) or force is None:
if debug:
ll = '\n' + '-' * 50 + '\n'
sys.stderr.write(ll + 'working on rcode:' + ll + contentstr + ll)
shell.process(contentstr, echo=True)
time.sleep(deltat)
output = shell.astext().split('\n')
codecs.open("images/inline/%s.Routput" % hash, 'w',
'utf-8').write('\n'.join(output))
if debug:
sys.stderr.write(('output file: images/inline/%s.Routput\n' %
hash) +
file("images/inline/%s.Routput" % hash).read())
else:
output = codecs.open("images/inline/%s.Routput" % hash, 'r',
'utf-8').read().split('\n')
shell.input += "%s\n" % contentstr
if debug:
print 'RCODE CONTENT', content
print 'RCODE OUTPUT', output
silent = False
if options.pop('silent', False) is None:
silent = True
if options.pop('source', False) is None: # if present in options,
# source is None
lines = content
else:
lines = output
if len(lines) and not silent:
r_lines = ['.. code-block:: r', '']
r_lines.extend([u' %s' % line for line in lines])
r_lines.append('')
state_machine.insert_input(r_lines,
state_machine.input_lines.source(0))
return []
def rcode_directive(name, arguments, options, content, lineno,
content_offset, block_text, state, state_machine):
if len(arguments) == 1: # it is a filename
content = [file(arguments[0]).read()]
shell.astext()
contentstr = '\n'.join([c for c in content])
m = md5()
m.update(contentstr)
hash = m.hexdigest()[-10:]
force = options.pop('force', False) # if present in options, force is None
if not os.path.exists("images/inline/%s.Routput" % hash) or force is None:
if debug:
ll = '\n' + '-'*50 + '\n'
sys.stderr.write(ll + 'working on rcode:' + ll + contentstr + ll)
shell.process(contentstr, echo=True)
time.sleep(deltat)
output = shell.astext().split('\n')
codecs.open("images/inline/%s.Routput" % hash, 'w', 'utf-8').write('\n'.join(output))
if debug:
sys.stderr.write(('output file: images/inline/%s.Routput\n' % hash) +
file("images/inline/%s.Routput" % hash).read())
else:
output = codecs.open("images/inline/%s.Routput" % hash, 'r', 'utf-8').read().split('\n')
shell.input += "%s\n" % contentstr
if debug:
print 'RCODE CONTENT', content
print 'RCODE OUTPUT', output
silent = False
if options.pop('silent', False) is None:
silent = True
if options.pop('source', False) is None: # if present in options,
# source is None
lines = content
else:
lines = output
if len(lines) and not silent:
r_lines = ['.. code-block:: r', '']
r_lines.extend([u' %s'%line for line in lines])
r_lines.append('')
state_machine.insert_input(
r_lines, state_machine.input_lines.source(0))
return []
def rplot_directive(name, arguments, options, content, lineno,
content_offset, block_text, state, state_machine):
if len(arguments) == 1: # it is a filename
content = [file(arguments[0]).read()]
m = md5()
m.update('\n'.join(content))
hash = m.hexdigest()[-10:]
if not os.path.exists(os.path.join("images", "inline")):
os.makedirs(os.path.join("images", "inline"))
shell.process('png("%s", width=600, height=600)' % os.path.join("images", "inline", "%s.png" % hash))
shell.astext() # flush
for line in content:
shell.process(line)
output = shell.astext().split('\n')
shell.process('dev.off()')
shell.astext() # flush
if options.has_key('silent'):
silent = True
else:
silent = False
if options.has_key('source'):
lines = content
else:
lines = output
if len(lines) and not silent:
r_lines = ['.. code-block:: r', '']
r_lines.extend([u' %s'% line for line in lines])
r_lines.extend(['.. image:: images/inline/%s.png' % hash, ''])
state_machine.insert_input(
r_lines, state_machine.input_lines.source(0))
return []
def rplot_directive(name, arguments, options, content, lineno, content_offset,
block_text, state, state_machine):
if len(arguments) == 1: # it is a filename
content = [file(arguments[0]).read()]
m = md5()
m.update('\n'.join(content))
hash = m.hexdigest()[-10:]
if not os.path.exists(os.path.join("images", "inline")):
os.makedirs(os.path.join("images", "inline"))
shell.process('png("%s", width=600, height=600)' %
os.path.join("images", "inline", "%s.png" % hash))
shell.astext() # flush
for line in content:
shell.process(line)
output = shell.astext().split('\n')
shell.process('dev.off()')
shell.astext() # flush
if options.has_key('silent'):
silent = True
else:
silent = False
if options.has_key('source'):
lines = content
else:
lines = output
if len(lines) and not silent:
r_lines = ['.. code-block:: r', '']
r_lines.extend([u' %s' % line for line in lines])
r_lines.extend(['.. image:: images/inline/%s.png' % hash, ''])
state_machine.insert_input(r_lines,
state_machine.input_lines.source(0))
return []
def rplot_directive(name, arguments, options, content, lineno, content_offset,
block_text, state, state_machine):
if len(arguments) == 1: # it is a filename
content = [file(arguments[0]).read()]
m = md5()
contentstr = '\n'.join([c for c in content])
m.update(contentstr)
hash = m.hexdigest()[-10:]
if not os.path.exists("images/inline"):
response = ''
while response not in ['Y', 'N']:
print 'Directory %s does not exist, Create [Y/N]?' % os.path.abspath(
'images/inline')
response = raw_input().strip().upper()
if response == 'Y':
os.makedirs('images/inline')
shell.process('png("images/inline/%s.png", width=600, height=600)' % hash,
echo=False)
shell.astext() # flush
force = options.pop('force', False) # if present in options, force is None
caption = options.pop('caption', None)
if not os.path.exists("images/inline/%s.Routput" % hash) or force is None:
if debug:
ll = '\n' + '-' * 50 + '\n'
sys.stderr.write(ll + 'working on rplot:' + ll + contentstr + ll)
shell.process(contentstr, echo=True)
time.sleep(deltat)
output = shell.astext().split('\n')
codecs.open("images/inline/%s.Routput" % hash, 'w',
'utf-8').write('\n'.join(output))
if debug:
sys.stderr.write(('output file: images/inline/%s.Routput\n' %
hash) +
file("images/inline/%s.Routput" % hash).read())
else:
output = codecs.open("images/inline/%s.Routput" % hash, 'r',
'utf-8').read().split('\n')
shell.input += "%s\n" % contentstr
if debug:
print 'RPLOT CONTENT', content
print 'RPLOT OUTPUT', output
shell.process('dev.off()', echo=False)
shell.astext() # flush
silent = False
if options.pop('silent', False) is None:
silent = True
if options.pop('source', False) is None: # if present in options,
# source is None
lines = content
else:
lines = output
# flush R specific options before creating fig options
for k in ['force', 'silent', 'caption', 'source']:
options.pop(k, None)
fig_options = [" :%s: %s" % (k, v) for (k, v) in options.items()]
if len(lines) and not silent:
r_lines = ['.. code-block:: r', '']
r_lines.extend([u' %s' % line for line in lines])
r_lines.extend(['.. figure:: images/inline/%s.png' % hash] +
fig_options + [''])
if caption:
r_lines.extend([' %s' % caption, ''])
state_machine.insert_input(r_lines,
state_machine.input_lines.source(0))
return []
def rplot_directive(name, arguments, options, content, lineno,
content_offset, block_text, state, state_machine):
if len(arguments) == 1: # it is a filename
content = [file(arguments[0]).read()]
m = md5()
contentstr = '\n'.join([c for c in content])
m.update(contentstr)
hash = m.hexdigest()[-10:]
if not os.path.exists("images/inline"):
response = ''
while response not in ['Y', 'N']:
print 'Directory %s does not exist, Create [Y/N]?' % os.path.abspath('images/inline')
response = raw_input().strip().upper()
if response == 'Y':
os.makedirs('images/inline')
shell.process('png("images/inline/%s.png", width=600, height=600)' % hash, echo=False)
shell.astext() # flush
force = options.pop('force', False) # if present in options, force is None
caption = options.pop('caption', None)
if not os.path.exists("images/inline/%s.Routput" % hash) or force is None:
if debug:
ll = '\n' + '-'*50 + '\n'
sys.stderr.write(ll + 'working on rplot:' + ll + contentstr + ll)
shell.process(contentstr, echo=True)
time.sleep(deltat)
output = shell.astext().split('\n')
codecs.open("images/inline/%s.Routput" % hash, 'w', 'utf-8').write('\n'.join(output))
if debug:
sys.stderr.write(('output file: images/inline/%s.Routput\n' % hash) +
file("images/inline/%s.Routput" % hash).read())
else:
output = codecs.open("images/inline/%s.Routput" % hash, 'r', 'utf-8').read().split('\n')
shell.input += "%s\n" % contentstr
if debug:
print 'RPLOT CONTENT', content
print 'RPLOT OUTPUT', output
shell.process('dev.off()', echo=False)
shell.astext() # flush
silent = False
if options.pop('silent', False) is None:
silent = True
if options.pop('source', False) is None: # if present in options,
# source is None
lines = content
else:
lines = output
# flush R specific options before creating fig options
for k in ['force', 'silent', 'caption', 'source']:
options.pop(k, None)
fig_options = [" :%s: %s" % (k,v) for (k, v) in options.items()]
if len(lines) and not silent:
r_lines = ['.. code-block:: r', '']
r_lines.extend([u' %s'% line for line in lines])
r_lines.extend(['.. figure:: images/inline/%s.png' % hash] +
fig_options + [''])
if caption:
r_lines.extend([' %s' % caption, ''])
state_machine.insert_input(
r_lines, state_machine.input_lines.source(0))
return []
